CX291300

Overview
NameCX291300
Unique NameCX291300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length574
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 2.133e-50
Identity = 91/165 (55.15%), Postives = 130/165 (78.79%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 507
            +F+LSGIPPAPRG PQIEVTF++DANGILNV A +KGTGKS KITITNDKGRLS+E+ID+MV EAE+F  ED++  +++ A+N LE+Y + +KN +++ +   +K+  ++  K+E A ++A+ WLD +Q+A  E+Y+E+ KE+E V NPI++  Y  +GGAPGAG
Sbjct:  456 KFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKSNKITITNDKGRLSKEDIDKMVAEAEKFKAEDEQEAQRVQAKNQLESYAFTLKNSVSE-NNFKEKVGEEDARKLEAAAQDAINWLDASQAASTEEYKERQKELEGVANPIMSKFYGAAGGAPGAG 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.133e-50
Identity = 93/162 (57.41%), Postives = 123/162 (75.93%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            FDLSGIPPAPRG PQIEVTF++DANGILNV AE+KGTGK  +ITITNDKGRLS++EI+RMV +A ++  +DK   ++++A+N LE Y Y+MKN + D + ++ KL+  +K  +   ++ ALEWL  NQ A KE+YE K KE+E VCNPI+T +YQ  GG  G
Sbjct:  462 FDLSGIPPAPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNQITITNDKGRLSKDEIERMVNDAMKYEADDKAQADRVEAKNGLENYAYSMKNTLGDSN-VSGKLDDTDKSTLNKEIEAALEWLSSNQEATKEEYEHKQKELENVCNPIMTKMYQSMGGGAG 622          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.133e-50
Identity = 91/163 (55.83%), Postives = 127/163 (77.91%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+LSGIPP PRG PQIEVTF++DANGILNV A DK TGK  KITIT DKGRLS+EEI+RMV +AE+F +ED+K ++++ A+N LE+Y ++MK+ + D +K+ +K+   ++ +I    +E ++WLD NQ AEKE+YE + KE+E+VCNPII  +YQ +GG  G
Sbjct:  460 KFELSGIPPGPRGVPQIEVTFDIDANGILNVSAVDKSTGKQNKITITRDKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSMKSTVED-EKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESVCNPIIAKMYQEAGGVGG 621          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 2.786e-50
Identity = 93/160 (58.13%), Postives = 128/160 (80.00%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDN-QSAEKEDYEEKLKEVEAVCNPIITAVYQRSG 489
            +F+L+GIPPAPRG PQIEV+FE+DANGIL V A DKGTGK+E ITITNDKGRL+QEEIDRMV EAE++AEEDK  +E+I+ARN LE Y +++KNQ+ND+D L  K++ ++K+ I  AVKEA +WL++N  +A  ED++E+ +++  V  PI + +Y + G
Sbjct:  490 KFELTGIPPAPRGVPQIEVSFELDANGILKVSAHDKGTGKAESITITNDKGRLTQEEIDRMVAEAEKYAEEDKATRERIEARNGLENYAFSLKNQVNDEDGLGGKIDEEDKETILDAVKEAQDWLEENAATASAEDFDEQKEKLSNVAYPITSKLYSQGG 649          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.638e-50
Identity = 92/162 (56.79%), Postives = 124/162 (76.54%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            FDLSGIPPAPRG PQIEVTF++DANGILNV AE+KGTGK  +ITITNDKGRLS++EI+RMV +A ++  +D+  +++++A+N LE Y Y+MKN + D + ++ KL+  +K  +   +   LEWL  NQ A KE+YE K KE+E+VCNPI+T +YQ  GGA G
Sbjct:  461 FDLSGIPPAPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNQITITNDKGRLSKDEIERMVNDAMKYEADDRAQRDRVEAKNGLENYAYSMKNTLGDSN-VSGKLDDSDKATLNKEIDVTLEWLSSNQEATKEEYEHKQKELESVCNPIMTKMYQSMGGAGG 621          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.751e-50
Identity = 95/164 (57.93%), Postives = 127/164 (77.44%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 507
            F+LSGIPPAPRG PQIEVTF++DANGILNV A DK TGK+ KITITNDKGRLS+EEI+RMV+EAE++  ED+  +E++ A+N+LE+Y +NMK+ + D + L  K+   +K K+    +E + WLD N  AEK+++E K KE+E VCNPII+ +YQ +GG PG G
Sbjct:  459 FELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVED-EGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGG-PGPG 620          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 197.208 bits (500), Expect = 4.751e-50
Identity = 95/164 (57.93%), Postives = 127/164 (77.44%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 507
            F+LSGIPPAPRG PQIEVTF++DANGILNV A DK TGK+ KITITNDKGRLS+EEI+RMV+EAE++  ED+  +E++ A+N+LE+Y +NMK+ + D + L  K+   +K K+    +E + WLD N  AEK+++E K KE+E VCNPII+ +YQ +GG PG G
Sbjct:  459 FELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVED-EGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGG-PGPG 620          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.205e-50
Identity = 94/162 (58.02%), Postives = 127/162 (78.40%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 498
            +F+L+GIPPAPRG PQIEVTF++DANGI+NV A +KGTGKS KITITNDKGRLS+EEI+RM+ EAE++  ED+    +I A+N LE+Y Y++KN I +  KL  ++  D+K KIE  + E + WLD+NQ+AEK++YE + KE+EA+ NPI+ A Y  +GGAP
Sbjct:  326 KFELTGIPPAPRGVPQIEVTFDLDANGIMNVSASEKGTGKSNKITITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRIQAKNGLESYAYSLKNTITE-GKL--QMSDDDKKKIEDKISEIISWLDNNQTAEKDEYESQQKELEAIANPIMQAAYGAAGGAP 484          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.205e-50
Identity = 91/162 (56.17%), Postives = 123/162 (75.93%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            FDLS IPPAPRG PQIEVTF++DANGILNV AE+KGTGK   ITITNDKGRLS++EI+RMV +A ++ + DK  ++ ++A+N LE Y Y+MKN ++D + ++ KLE  ++  +  A+  ALEWL+ NQ A KE+YE + KE+E+ CNPI+T +YQ  GG  G
Sbjct:   36 FDLSAIPPAPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNHITITNDKGRLSKDEIERMVNDASKYEQADKMQRDALEAKNGLENYAYSMKNTVSDTN-VSGKLEESDRSALNLAIDTALEWLNSNQEASKEEYEHRQKELESTCNPIMTKMYQSMGGGAG 196          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 8.105e-50
Identity = 95/160 (59.38%), Postives = 124/160 (77.50%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGA 495
            F+LSGIPP PRG PQIEVTF++DANGILNV AE+KGTGK  +I +TNDKGRLS+ EI+RMVREA ++  EDK    +IDA+N LE Y ++MKN +ND + +A K+E  +K  I +AV+EALEWL++NQ A KE+YE + KE+E +C PI+T +YQ   GA
Sbjct:  462 FELSGIPPPPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNQIVLTNDKGRLSRAEIERMVREAAKYEAEDKDQVRQIDAKNGLENYAFSMKNAVNDPN-VAGKIEEADKKTITSAVEEALEWLNNNQEASKEEYEHRQKELENLCTPIMTNMYQGMAGA 620          
The following BLAST results are available for this feature:
BLAST of CX291300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP74_YEAST2.133e-5055.15Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP70_LEIAM2.133e-5057.41Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_ECHGR2.133e-5055.83Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
GRP78_NEUCR2.786e-5058.1378 kDa glucose-regulated protein homolog OS=Neuros... [more]
HSP70_LEIDO3.638e-5056.79Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP71_PONAB4.751e-5057.93Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN4.751e-5057.93Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP70_PENCI6.205e-5058.02Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP70_LEIBR6.205e-5056.17Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP70_TRYCR8.105e-5059.38Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]

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Properties
Property NameValue
Genbank descriptionC03006D12SK OF2 Citrus clementina cDNA clone C03006D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291300 ID=CX291300; Name=CX291300; organism=Citrus clementina; type=EST; length=574bp
ATTCGGCACGAGGAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGG
AACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAA
ATGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATC
ACAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGATCGTATGGTTCG
TGAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAGGAGAAGATCG
ATGCTCGCAACAGCCTTGAGACCTATGTCTATAACATGAAAAACCAGATT
AATGACAAGGACAAGCTTGCCGACAAGCTCGAATCTGATGAGAAGGACAA
GATTGAAACTGCTGTAAAGGAAGCCCTTGAATGGCTCGATGACAACCAGA
GTGCAGAGAAAGAGGACTATGAAGAGAAGCTCAAGGAGGTTGAAGCCGTT
TGCAACCCCATCATCACTGCTGTATATCAGAGATCTGGCGGAGCCCCCGG
TGCTGGCACTGAATCATCGGATGATGATGATTCACACGATGAGCTCTAAA
GAATCTTTACTTCGATTGACCATA
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