CX291300

Overview
NameCX291300
Unique NameCX291300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length574
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 8.105e-50
Identity = 96/165 (58.18%), Postives = 125/165 (75.76%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 510
            FDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK+ KITITNDKGRLS+EEI+RMV +AE++  ED+  +EKI A+N+LE+Y +NMK+ ++D + L  K+   +K KI     EAL WL+ NQ AEK++++ K +E+E VCNPIIT +YQ     P  GT
Sbjct:  461 FDLTGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSD-EGLKGKISDADKKKILNKCNEALSWLEANQLAEKDEFDHKRRELEQVCNPIITKLYQGGCTGPSCGT 624          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 8.105e-50
Identity = 95/161 (59.01%), Postives = 123/161 (76.40%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQ-SAEKEDYEEKLKEVEAVCNPIITAVYQRSGG 492
            +F+L GIPPAPRG PQIEVTFE+DANGIL V A DKGTGKSE ITITNDKGRLS++EI+RMV EAE FAEED  ++E I+A+NSLE Y ++++NQ+ DK  L  K+ +D+K+ +  AV E LEWL+ N  SA KED+EEK + + A+  PI + +Y+   G
Sbjct:  488 KFELKGIPPAPRGVPQIEVTFELDANGILRVTAHDKGTGKSETITITNDKGRLSKDEIERMVEEAERFAEEDALIRETIEAKNSLENYAHSLRNQVADKSGLGGKISADDKEALNDAVTETLEWLEANSVSATKEDFEEKKEALSAIAYPITSKIYEGGEG 648          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.058e-49
Identity = 96/161 (59.63%), Postives = 122/161 (75.78%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 498
            FDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK+ KITITNDKGRLS+EEI+RMV+EAE +  ED+  +EKI A+N+LE+Y +NMK+ + D + L DK+   +K KI     E L WL+ NQ AEKE+++ K KE+E +CNPIIT +YQ     P
Sbjct:  461 FDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGD-EGLKDKISESDKKKILDKCSEVLSWLEANQLAEKEEFDHKRKELENMCNPIITKLYQSGCTGP 620          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.058e-49
Identity = 95/164 (57.93%), Postives = 127/164 (77.44%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 507
            F+LSGIPPAPRG PQIEVTF++DANGILNV A DK TGK+ KITITNDKGRLS+EEI+RMV+EAE++  ED+  +E++ A+N+LE+Y +NMK+ + D + L  K+   +K K+    +E + WLD N  AEK+++E K KE+E VCNPII+ +YQ +GG PG G
Sbjct:  459 FELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEIQRERVGAKNALESYAFNMKSVVED-EGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGG-PGPG 620          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 195.667 bits (496), Expect = 1.382e-49
Identity = 93/163 (57.06%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+LSGIPPAPRG PQIEVTF+VD+NGILNV A +KGTGKS KITITNDKGRLS+E+I++MV EAE+F EED+K  ++I ++N LE+  Y++KN I++     DKLE  +KD +    +E + WLD N +A KE++++KLKE++ + NPI++ +YQ +GGAPG
Sbjct:  455 KFELSGIPPAPRGVPQIEVTFDVDSNGILNVSAVEKGTGKSNKITITNDKGRLSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNTISE---AGDKLEQADKDTVTKKAEETISWLDSNTTASKEEFDDKLKELQDIANPIMSKLYQ-AGGAPG 613          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.382e-49
Identity = 96/165 (58.18%), Postives = 125/165 (75.76%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 510
            FDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK+ KITITNDKGRLS+EEI+RMV +AE++  ED+  +EKI A+N+LE+Y +NMK+ ++D + L  K+   +K KI +   E L WL+ NQ AEK++++ K KE+E VCNPIIT +YQ     P  GT
Sbjct:  461 FDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSD-EGLQGKISESDKKKILSKCNEVLLWLEANQLAEKDEFDHKRKELEQVCNPIITKLYQGGCTGPSCGT 624          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 1.806e-49
Identity = 95/164 (57.93%), Postives = 125/164 (76.22%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 507
            F+LSGIPPAPRG PQIEVTF++DANGILNV A DK TGK+ KITITNDKGRLS+EEI+RMV+EAE +  ED+  +E++ A+N+LE+Y +NMK+ + D + L  K+   +K K+    +E + WLD N  AEKE++  K +E+E VCNPII+ +YQ   GAPGAG
Sbjct:  459 FELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRERVAAKNALESYAFNMKSAVED-EGLKGKISEADKKKVLDKCQEVISWLDSNTLAEKEEFVHKREELERVCNPIISGLYQ-GAGAPGAG 620          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.806e-49
Identity = 91/163 (55.83%), Postives = 124/163 (76.07%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+LSGIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+E+I+RMV++A+++  ED   +EKI A+NSLE+Y +NMK+ + D D +  K+  ++K K+     + + WL++NQ  +KE+YE +LKE+E VC PIIT +YQ+ G   G
Sbjct:  460 KFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQDADKYKAEDDAQREKIAAKNSLESYAFNMKSSVED-DNMKGKISQEDKKKVVDRCDQTISWLENNQLGDKEEYEHQLKELEKVCQPIITKLYQQGGMPTG 621          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 2.358e-49
Identity = 95/164 (57.93%), Postives = 123/164 (75.00%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 507
            FDLSGIPPAPRG PQIEVTF++DANGIL+V AE+KGTGK  +I ITNDKGRLS+ +I+RMV +A ++  EDK     IDA+N LE Y ++MKN IND + +A KL+  +K+ + TAV+EAL WL+DNQ A  E+Y  + KE+E VC PI++ +YQ  GG  G G
Sbjct:  462 FDLSGIPPAPRGVPQIEVTFDLDANGILSVSAEEKGTGKRNQIVITNDKGRLSKADIERMVSDAAKYEAEDKAHVXXIDAKNGLENYAFSMKNTINDPN-VAGKLDDADKNAVTTAVEEALRWLNDNQEASLEEYNHRQKELEGVCAPILSKMYQGMGGGDGPG 624          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.358e-49
Identity = 93/163 (57.06%), Postives = 125/163 (76.69%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+LSGIPPAPRG PQIEVTF++DANGILNV A DK +GK  KITITNDKGRLS+EEI+RMV+EAE +  +D+  +EK+ A+N+LE+  +NMK+ + + D L DK+  D++ KI     + + W+++NQ AEKE+YE + KE+E VCN IIT +YQ  GG PG
Sbjct:  460 KFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSSGKQNKITITNDKGRLSKEEIERMVQEAERYKADDEAQREKVSAKNTLESIAFNMKSTV-EGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQ--GGMPG 619          
The following BLAST results are available for this feature:
BLAST of CX291300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS71L_PIG8.105e-5058.18Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
GRP78_YARLI8.105e-5059.0178 kDa glucose-regulated protein homolog OS=Yarrow... [more]
HS71L_RAT1.058e-4959.63Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71A_PIG1.058e-4957.93Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HSP71_YEAST1.382e-4957.06Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HS71L_BOVIN1.382e-4958.18Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP71_RAT1.806e-4957.93Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]
HSP70_ONCTS1.806e-4955.83Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP74_TRYBB2.358e-4957.93Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_PLEWA2.358e-4957.06Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]

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Properties
Property NameValue
Genbank descriptionC03006D12SK OF2 Citrus clementina cDNA clone C03006D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291300 ID=CX291300; Name=CX291300; organism=Citrus clementina; type=EST; length=574bp
ATTCGGCACGAGGAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGG
AACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAA
ATGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATC
ACAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGATCGTATGGTTCG
TGAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAGGAGAAGATCG
ATGCTCGCAACAGCCTTGAGACCTATGTCTATAACATGAAAAACCAGATT
AATGACAAGGACAAGCTTGCCGACAAGCTCGAATCTGATGAGAAGGACAA
GATTGAAACTGCTGTAAAGGAAGCCCTTGAATGGCTCGATGACAACCAGA
GTGCAGAGAAAGAGGACTATGAAGAGAAGCTCAAGGAGGTTGAAGCCGTT
TGCAACCCCATCATCACTGCTGTATATCAGAGATCTGGCGGAGCCCCCGG
TGCTGGCACTGAATCATCGGATGATGATGATTCACACGATGAGCTCTAAA
GAATCTTTACTTCGATTGACCATA
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