CX291325

Overview
NameCX291325
Unique NameCX291325
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length188
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.027e-28
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 1
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEY+NENGAMVPVRVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  170 TQVTVEYFNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231          
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.027e-28
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 1
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYN+NGAMVP+RVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  174 TQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235          
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.260e-28
Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 1
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYN+NGAMVP+RVHTVLISTQHD+TVTNDEIAADLKEHVI PV+PEKYLDEKTIFH
Sbjct:  170 TQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFH 231          
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.869e-28
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 1
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGA VPVRVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  170 TQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231          
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.869e-28
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 1
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGAMVPVRVHTVLISTQHD+TVTNDEIA DLKEHVI PVIPEKYLDEKTIFH
Sbjct:  170 TQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAHDLKEHVIKPVIPEKYLDEKTIFH 231          
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.869e-28
Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 1
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVT+EYYNENGAMVP+RVHTVLISTQHD+TVTND+IAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  137 TQVTIEYYNENGAMVPIRVHTVLISTQHDETVTNDKIAADLKEHVIRPVIPEKYLDEKTIFH 198          
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.869e-28
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 1
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGAMVP+RVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDE TIFH
Sbjct:  174 TQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDENTIFH 235          
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.972e-28
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 1
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYN+NGAMVPVRVHTVLISTQHD+TV+NDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  170 TQVTVEYYNDNGAMVPVRVHTVLISTQHDETVSNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231          
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.172e-27
Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 1
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVT+EYYNENGAMVPVRVHTVLISTQHD+TV+ND+IAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  171 TQVTIEYYNENGAMVPVRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFH 232          
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.172e-27
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 1
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEY+NENGAMVP+RVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  170 TQVTVEYHNENGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231          
The following BLAST results are available for this feature:
BLAST of CX291325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
METK2_BRAJU4.027e-2895.16S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK1_BETVU4.027e-2893.55S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK2_CATRO5.260e-2891.94S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK_CARPA6.869e-2895.16S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK3_PETHY6.869e-2895.16S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK3_ACTCH6.869e-2891.94S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]
METK2_DIACA6.869e-2893.55S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]
METK2_BETVU8.972e-2893.55S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK_MEDTR1.172e-2791.94S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK5_VITVI1.172e-2793.55S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionC03006G02SK OF2 Citrus clementina cDNA clone C03006G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291325 ID=CX291325; Name=CX291325; organism=Citrus clementina; type=EST; length=188bp
ACACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGT
GAGAGTTCACACAGTTTTGATCTCTACTCAGCATGACAAAACTGTGACTA
ATGATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCACGCCTGTTATT
CCTGAAAAGTACCTTGATGAGAAGACTATCTTCCATCT
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