CX291395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL5_RAT (Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15 Identity = 59/185 (31.89%), Postives = 102/185 (55.14%), Query Frame = -2 Query: 195 KHELNVSTYQMCVLMLFNSVDR--LSYKEIEQATEIPAPELKRCLQSLACVKG--KHVLRKEPM---SKDIAEDDAFFFNDKFTS-KFVKVK-------IGTVVAQRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVD 704 +++L V+T+Q+ VL +N R +S++ ++ ATE+P EL+R L SL + VL +P KD E F N F+ K KV+ IG + Q +E +E + + + R + + AI++IMK R+ + + + TE+ + L++ FLP +IK++IE LIE +++ RD+ D Sbjct: 590 QYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEAD 772
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL2_CAEEL (Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 52/160 (32.50%), Postives = 84/160 (52.50%), Query Frame = -2 Query: 207 YQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQSLACVKGKHVLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQRESEPENQETRQ--RVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLER 680 YQM L+ F D + K+I + + L + ++++ V +L + +++ D N TSK +K ++ + E E + +V +DRK +E AIVRIMK R+VL HN +VTE+ Q + RF P+ IKK IE LIE+ +++R Sbjct: 611 YQMAALLCFERRDAILVKDIGEEIGVSGDYLLKTIRTILDVT---LLTCD--DQNLTADSLVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQR 765
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL5_MOUSE (Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 58/185 (31.35%), Postives = 101/185 (54.59%), Query Frame = -2 Query: 195 KHELNVSTYQMCVLMLFNSVDR--LSYKEIEQATEIPAPELKRCLQSLACVKG--KHVLRKEPM---SKDIAEDDAFFFNDKFTS-KFVKVK-------IGTVVAQRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVD 704 +++L V+T+Q+ VL +N R +S++ ++ ATE+P EL+R L SL + VL +P KD E F N F+ K KV+ IG + Q +E +E + + + R + + AI++IMK R+ + + + TE+ + L++ FLP +IK+++E LIE ++ RD+ D Sbjct: 590 QYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEAD 772
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL3_YEAST (Cullin-3 OS=Saccharomyces cerevisiae GN=CUL3 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14 Identity = 50/173 (28.90%), Postives = 89/173 (51.45%), Query Frame = -2 Query: 195 HELNVSTYQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQSLACVKGKHVLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQRESEP-ENQETRQRVE---EDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVD 701 +E++ S Y + +LF + L+ EI + T IP ++K + S++ + +L+K S ++ F N F+S KVK+ + S+ +N T V+ + ++ A IVRIMK L H ++ TK+ QSR P ++K+ I+ LIE+E+++R+ D Sbjct: 568 YEISFSVYAGVIFLLFEDYEELTLGEIYELTHIPIDDVKSLVMSMSTIPRCKILKKSSSSGNMK----FSVNYFFSSPNRKVKVPVIACPLPSQKSDNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIEKEYIQRNADD 736
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL5_RABIT (Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 58/185 (31.35%), Postives = 100/185 (54.05%), Query Frame = -2 Query: 195 KHELNVSTYQMCVLMLFNSVDR--LSYKEIEQATEIPAPELKRCLQSLACVKG--KHVLRKEPM---SKDIAEDDAFFFNDKFTS-KFVKVK-------IGTVVAQRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVD 704 +++L V+T+Q+ VL +N R +S++ ++ ATE+P EL+R L SL + VL EP KD E F N +F+ K KV+ IG + Q +E +E + + + R + ++IMK R+ + + + TE+ + L++ FLP +IK++IE LIE +++ RD+ D Sbjct: 590 QYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTRKLYIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESD 772
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL5_CAEEL (Cullin-5 OS=Caenorhabditis elegans GN=cul-5 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 52/185 (28.11%), Postives = 95/185 (51.35%), Query Frame = -2 Query: 207 GQKHELNVSTYQMCVLMLFN--SVDRLSYKEIEQATEIPAPELKRCLQSLAC---VKGKHVLRKEPMS----KDIAEDDAFFFNDKF-------TSKFVKVK-IGTVVAQRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLER 710 G + +L +T+QM VL FN + D++S + + ATE+P EL R L SL ++ + +L P + +D + F N F + + KV IG + E+ E + + + R+ +++ IV+I+K R+ + E+ + L+ F+PN +IK++I+ LIE +++ER Sbjct: 571 GGRFDLECTTFQMAVLFCFNDRAHDKISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARDFTDSTKFLINHDFNVVKNGKSQQRGKVNLIGRLQLSLEANAEKEH--ESIVALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMER 753 The following BLAST results are available for this feature:
BLAST of CX291395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291395 ID=CX291395; Name=CX291395; organism=Citrus clementina; type=EST; length=714bpback to top |