CX291464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_NICTO (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nicotiana tomentosiformis GN=ndhA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.945e-49 Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFY+ASYLNLLVSSLFVTVLYLGG NLSI Y+F+ Sbjct: 185 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYIASYLNLLVSSLFVTVLYLGGWNLSI-PYIFV 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_COFAR (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coffea arabica GN=ndhA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.945e-49 Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NLSI Y+F+ Sbjct: 185 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSI-PYIFV 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_AETGR (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Aethionema grandiflora GN=ndhA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.945e-49 Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N+SI Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SPIOL (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Spinacia oleracea GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 96/105 (91.43%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYGFWGWNLWRQPIGFIVF+ISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG NLSI Y+F+ Sbjct: 187 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNLSI-PYIFI 290
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_SOYBN (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Glycine max GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 95/105 (90.48%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNSLSTVDIV AQSKYGFWGWNLWRQP+GFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNL +SSLFVTVLY GGSN+SI Y+F+ Sbjct: 185 LSNSLSTVDIVDAQSKYGFWGWNLWRQPMGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLFISSLFVTVLYFGGSNISI-PYIFV 288
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_OLIPU (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Olimarabidopsis pumila GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N+SI Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_NASOF (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nasturtium officinale GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N+SI Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_NANDO (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nandina domestica GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDIV AQSKYGFWGWNLWRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NLSI Y+F+ Sbjct: 186 LSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFMVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSI-PYIFI 289
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_LOBMA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Lobularia maritima GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N+SI Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_LEPVR (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Lepidium virginicum GN=ndhA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.038e-48 Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGFWGWNLWRQPIGFI+FLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLL+SSLFVTVLYLGG N+SI Sbjct: 185 LSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIIFLISSLAECERLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISI 283 The following BLAST results are available for this feature:
BLAST of CX291464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291464 ID=CX291464; Name=CX291464; organism=Citrus clementina; type=EST; length=707bpback to top |