CX291464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_HORVU (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Hordeum vulgare GN=ndhA PE=2 SV=4) HSP 1 Score: 184.496 bits (467), Expect = 4.820e-46 Identity = 90/99 (90.91%), Postives = 95/99 (95.96%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYGF+GWN+WRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK+GLFY+ SYLNLLVSSLFVTVLYLGG N SI Sbjct: 184 LSNSLSTVDIVEAQSKYGFFGWNIWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNFSI 282
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_AGRST (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Agrostis stolonifera GN=ndhA PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.221e-46 Identity = 90/99 (90.91%), Postives = 95/99 (95.96%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQSKYGF+GWN+WRQPIGF+VFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIK+GLFY+ SYLNLLVSSLFVTVLYLGG NLSI Sbjct: 184 LSNSSSTVDIVEAQSKYGFFGWNIWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNLSI 282
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_POPAL (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Populus alba GN=ndhA PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.074e-45 Identity = 91/99 (91.92%), Postives = 93/99 (93.94%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQSKYGF GWNLWRQPIGFI+F ISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFV VLYLGG N+SI Sbjct: 185 LSNSSSTVDIVEAQSKYGFGGWNLWRQPIGFIIFFISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVAVLYLGGWNISI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_PHYPA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Physcomitrella patens GN=ndhA PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.074e-45 Identity = 90/111 (81.08%), Postives = 98/111 (88.29%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYL---FLGWL 679 LSNSLSTVDIV AQ+KYGFWGWN+WRQPIGF+ F I+SLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL SSLFVT+LYLGG + SI L +L W+ Sbjct: 187 LSNSLSTVDIVEAQAKYGFWGWNVWRQPIGFLAFFIASLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLASSLFVTILYLGGWHFSIPFLLNSNYLEWV 297
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_PELHO (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Pelargonium hortorum GN=ndhA PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.074e-45 Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFL 670 LSNS STVDI+ AQSKYGFWGWNLWRQPIGF++FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKF FY+ SY NLLVSSLFVT+LYLGG N+SI FL Sbjct: 185 LSNSSSTVDIIEAQSKYGFWGWNLWRQPIGFLIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFAFFYITSYFNLLVSSLFVTILYLGGWNMSIPYIDFL 289
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_POPTR (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Populus trichocarpa GN=ndhA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.329e-45 Identity = 90/99 (90.91%), Postives = 92/99 (92.93%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNS STVDIV AQSKYG GWNLWRQPIGFI+F ISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFV VLYLGG N+SI Sbjct: 185 LSNSSSTVDIVEAQSKYGLGGWNLWRQPIGFIIFFISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVAVLYLGGWNISI 283
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ADICA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Adiantum capillus-veneris GN=ndhA PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.187e-44 Identity = 88/99 (88.89%), Postives = 89/99 (89.90%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LS SLSTVDIV QSKYGFWGWNLWRQPIGFI F ISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYV SYLNLL SSLFV VLYLGG + SI Sbjct: 187 LSGSLSTVDIVETQSKYGFWGWNLWRQPIGFIAFFISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVGSYLNLLASSLFVVVLYLGGWDFSI 285
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_ANGEV (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Angiopteris evecta GN=ndhA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.645e-44 Identity = 89/99 (89.90%), Postives = 92/99 (92.93%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYG GWNLWRQPIGF++F ISSLAECERLPFD PEAEEELVAGYQTEYSGIKFGLFYV SYLNLLVSSLFVTVLYLGG +LSI Sbjct: 187 LSNSLSTVDIVDAQSKYGLLGWNLWRQPIGFLIFFISSLAECERLPFDPPEAEEELVAGYQTEYSGIKFGLFYVGSYLNLLVSSLFVTVLYLGGWDLSI 285
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_HUPLU (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Huperzia lucidula GN=ndhA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.005e-43 Identity = 91/115 (79.13%), Postives = 96/115 (83.48%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIHTYLFLGWLK*ISGWN 700 LSNSLSTVDIV AQSKYGFWGWN WRQPIGF+ F ISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVAS+ NLL SSL T+LYLGG N I +LFL + GWN Sbjct: 186 LSNSLSTVDIVEAQSKYGFWGWNSWRQPIGFVAFFISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASHPNLLTSSLSATILYLGGWNSPI-PFLFLPKFDRL-GWN 298
BLAST of CX291464 vs. ExPASy Swiss-Prot
Match: NU1C_PSINU (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Psilotum nudum GN=ndhA PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.313e-43 Identity = 85/99 (85.86%), Postives = 92/99 (92.93%), Query Frame = 2 Query: 356 LSNSLSTVDIVVAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSI 652 LSNSLSTVDIV AQSKYG GWNLWRQP+GFIVF++SSLAECERLPFDLPEAEEELVAGYQTEYS IKFG F++ SYLNLLVSSLFVTVLYLGG +LS+ Sbjct: 187 LSNSLSTVDIVEAQSKYGILGWNLWRQPVGFIVFIVSSLAECERLPFDLPEAEEELVAGYQTEYSSIKFGFFFIGSYLNLLVSSLFVTVLYLGGWDLSL 285 The following BLAST results are available for this feature:
BLAST of CX291464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291464 ID=CX291464; Name=CX291464; organism=Citrus clementina; type=EST; length=707bpback to top |