CX291468

Overview
NameCX291468
Unique NameCX291468
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length619
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_HERA2 (Anthranilate phosphoribosyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.904e-26
Identity = 69/152 (45.39%), Postives = 91/152 (59.87%), Query Frame = 3
Query:  165 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            + I  + +R DL++ +A A ++ ++N EA  A I+A L  L  KGET  EI G+A+ M   +  V   G  VD  GTGGD +NT NIST A+ +AA  GA VAK             DVLE LGV I+LD EGV RC+ +AGIGFM + K+H
Sbjct:    5 DAIITVTNRTDLSQDDAAAVMEQMMNGEATPAQIAALLTALHFKGETDAEIAGMAQVMRAKSLAVPHDGGVVDTCGTGGDHSNTFNISTTAAFVAAGAGATVAKHGNRAMSSKCGSADVLEGLGVNIELDAEGVARCLRQAGIGFMFAPKFH 156          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_DESAA (Anthranilate phosphoribosyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=trpD PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.486e-26
Identity = 65/155 (41.94%), Postives = 92/155 (59.35%), Query Frame = 3
Query:  159 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            F+EL+  ++S  DL E E    +D +++ E +   I+AF+  L  KGETF E+ G AR+M + AT+++      VD  GTGGDGA+T NIST ++ + A CG  VAK             DVLEALGV +D  PE V + ++E GIGF+ +  YH
Sbjct:    2 FSELLKKIVSGQDLAEDETTTMMDAIMSGEVEVPAIAAFMAALATKGETFTELAGAARSMRRKATRIQVSSNTVVDTCGTGGDGASTFNISTTSAFVVAGCGVTVAKHGNRSVSSKCGSADVLEALGVKLDTHPEVVEQGIEEIGIGFLFAPMYH 156          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_ARTAT (Anthranilate phosphoribosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.486e-26
Identity = 69/151 (45.70%), Postives = 92/151 (60.93%), Query Frame = 3
Query:  168 LIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            LI  LI+  DL     + +++ ++  EA  A I+ FLV LRAKGET  E+ GL  AM+++A  ++  G+ +DIVGTGGD  NTVNIST A+++AA  GAKV K             DVLEALGV +DL  E V R  +EAGI F  +  +H
Sbjct:   17 LISALINGDDLAVGNTEWAMNTIMAGEATPAQIAGFLVALRAKGETVEELAGLVEAMVQHANPIDISGEKLDIVGTGGDRLNTVNISTMAALVAAGAGAKVVKHGNRAASSASGSADVLEALGVRLDLSIEQVARNAEEAGITFCFAQVFH 167          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_RHOSR (Anthranilate phosphoribosyltransferase OS=Rhodococcus sp. (strain RHA1) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.539e-26
Identity = 73/164 (44.51%), Postives = 99/164 (60.37%), Query Frame = 3
Query:  129 SDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +D  RP    +  ++  L    DL+  EA+ ++D ++++ A  A I+AF V L+ KGET  E+ GLA +M+ +A KV    D VDIVGTGGD +NTVNIST AS++ AA G +V K             DVLEALGV I+L P+ V RCV E GIGF  +  +H
Sbjct:   10 NDGVRPART-WPSVLGTLTDGRDLSVDEAKWAMDEIMSDNATSAQIAAFGVALKMKGETPEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVREVGIGFCFAPVFH 172          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP5 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.539e-26
Identity = 67/154 (43.51%), Postives = 89/154 (57.79%), Query Frame = 3
Query:  159 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            F  +I  + +   LT  EA A+ D +++ EA  + + A L+ LR +GET  EI G   AM      V    DAVD+VGTGGDG+ +VN+ST A+ + A CGA VAK             DVL ALGV ID+ P+ V RC+ EAGIGFM +  +H
Sbjct:    4 FKSIIGKVATGATLTRDEATAAFDAMMSGEATPSQMGALLMGLRVRGETVDEIAGAVSAMRAKMLTVTAPPDAVDVVGTGGDGSGSVNVSTCAAFIVAGCGAPVAKHGNRALSSRSGAADVLAALGVKIDITPDQVGRCIAEAGIGFMFAPTHH 157          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_SYMTH (Anthranilate phosphoribosyltransferase OS=Symbiobacterium thermophilum GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.234e-26
Identity = 66/143 (46.15%), Postives = 87/143 (60.84%), Query Frame = 3
Query:  195 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            DLTEA+A+A++  ++  EA  A ++AFL+ LR KGET  EI G AR M + A ++       VD  GTGGDG++T NIST A+ + A  G  VAK             DVLEALG+ +DL PE V RC+DE GIGF+ +   H
Sbjct:   13 DLTEAQAEAAMTLMMTGEATPAQVAAFLMALRIKGETVAEITGAARVMRERAIRIHHSRPLVVDTCGTGGDGSHTFNISTTAAFVVAGAGVAVAKHGNRAATSLTGSADVLEALGIHLDLTPEEVGRCIDEVGIGFLYAPALH 155          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_METS4 (Anthranilate phosphoribosyltransferase OS=Methylobacterium sp. (strain 4-46) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.234e-26
Identity = 66/141 (46.81%), Postives = 86/141 (60.99%), Query Frame = 3
Query:  198 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            LT  EA+ + D+LL+ E   A   AFL+ LR +GE   EIVG A A+ +   +V     A+DIVGTGGD + + N+ST ASIL AACG  VAK             DVL ALGV + LDPEG+ RC++EAG+ FM +  +H
Sbjct:   17 LTREEARTAFDHLLSGEVTHAQAGAFLMALRVRGEAQDEIVGAAGALRERMVRVVAPAGAIDIVGTGGDHSGSYNVSTLASILTAACGVPVAKHGNRAASSRSGAADVLAALGVRLGLDPEGLARCLEEAGLCFMFAQAHH 157          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_STRAW (Anthranilate phosphoribosyltransferase OS=Streptomyces avermitilis GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.448e-26
Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 3
Query:  165 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            E+++ L+   D +  +   ++D ++  EA +A I+ FLV LRAKGET  EI GL RAM ++A  +E  G  VDIVGTGGDGA TVNIST +SI+ A  GAKV K             DVLE LG+ + L P+ V    +EAGI    + K+H
Sbjct:   19 EVLNGLLDGRDQSADDTAWAMDRIMRGEATDAQIAGFLVALRAKGETVEEISGLVRAMYEHANLIEVPGATVDIVGTGGDGAKTVNISTMSSIVVAGTGAKVVKHGNRAASSASGSSDVLEKLGINLQLTPKRVAEVAEEAGITICFAVKFH 170          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSF (Anthranilate phosphoribosyltransferase OS=Geobacter sp. (strain FRC-32) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.448e-26
Identity = 66/162 (40.74%), Postives = 91/162 (56.17%), Query Frame = 3
Query:  180 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            ++ R DL+++E    +D +++ EA  A I+AF+  LR KGET  EI G AR M   AT++                 L   +D+VGTGGDG NT NIST  S + AACG KVAK             DV+EALG+ +++ PE V  C++EAGIGF+ +   H
Sbjct:    9 VVEREDLSQSEMIQVMDQIMSGEATPAQIAAFITALRMKGETVAEIAGAARVMRDRATRIRVGKNVLDLDRDDINIDLETILDVVGTGGDGTNTFNISTTVSFVVAACGVKVAKHGNRSVSSACGSADVVEALGISLEVTPETVENCINEAGIGFLYAPALH 170          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_SALAI (Anthranilate phosphoribosyltransferase OS=Salinispora arenicola (strain CNS-205) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.234e-25
Identity = 69/156 (44.23%), Postives = 94/156 (60.26%), Query Frame = 3
Query:  165 ELIDCLISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD----AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +L+  L+   +L+ A+ A A  + +   A  A I+ F + LRAKGET  E+ GL  AM+++A +VE   D    AVD+VGTGGD A+TVNIST AS++ A  G +V K             DVLE LG+ +DL PEGV  CV EAGIGF  + ++H
Sbjct:    8 QLLAALLRGDELSTADTAWAMGEIMSGSAGSAQIAGFAIALRAKGETPAEVSGLVEAMLQHAVRVELPEDLRATAVDVVGTGGDLAHTVNISTMASLVVAGAGVRVVKHGNRAASSSCGTADVLEFLGLPLDLGPEGVAACVAEAGIGFCFAARFH 163          
The following BLAST results are available for this feature:
BLAST of CX291468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_HERA21.904e-2645.39Anthranilate phosphoribosyltransferase OS=Herpetos... [more]
TRPD_DESAA2.486e-2641.94Anthranilate phosphoribosyltransferase OS=Desulfat... [more]
TRPD_ARTAT2.486e-2645.70Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_RHOSR5.539e-2644.51Anthranilate phosphoribosyltransferase OS=Rhodococ... [more]
TRPD_RHOP55.539e-2643.51Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_SYMTH7.234e-2646.15Anthranilate phosphoribosyltransferase OS=Symbioba... [more]
TRPD_METS47.234e-2646.81Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_STRAW9.448e-2644.74Anthranilate phosphoribosyltransferase OS=Streptom... [more]
TRPD_GEOSF9.448e-2640.74Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_SALAI1.234e-2544.23Anthranilate phosphoribosyltransferase OS=Salinisp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03009A02SK OF2 Citrus clementina cDNA clone C03009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291468 ID=CX291468; Name=CX291468; organism=Citrus clementina; type=EST; length=619bp
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTCCATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTCAAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACG
AAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGA
CCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCATGA
TGTCGACAAAGTATCACCC
back to top