CX291468

Overview
NameCX291468
Unique NameCX291468
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length619
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPF (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.178e-22
Identity = 58/149 (38.93%), Postives = 84/149 (56.38%), Query Frame = 3
Query:  180 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            ++  +DL+  E +  + + +  +  +A I AF++ +R K E+  EIVG    M + A KVE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H
Sbjct:   10 IVDHLDLSTDEMRDVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSVMRELADKVELKTLDRVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQTHH 158          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_LEIXX (Anthranilate phosphoribosyltransferase OS=Leifsonia xyli subsp. xyli GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.178e-22
Identity = 64/158 (40.51%), Postives = 90/158 (56.96%), Query Frame = 3
Query:  147 QTPCFNELIDCLISRVDLTEAEAQ-ASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +T  ++ ++  L++R DL+ A+A  A    +  EA +A I+AFL+ LRAKGET  EIVG   A++ +A  +     A+DIVGTGGD   TVNIST A+I+AA  G  V K             DVL ALG+ + L PE V   +   GI F  ++ +H
Sbjct:    3 ETQSWSSVLIALLAREDLSVADASWAMRQVMTGEATDAQIAAFLIALRAKGETVDEIVGFRDAVLDHAVGLPVNSMALDIVGTGGDRFGTVNISTTAAIVAAGAGVPVIKHGNRAASSSSGSSDVLAALGIDLTLPPERVAEVLRATGITFAFASAFH 160          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_MARMS (Anthranilate phosphoribosyltransferase OS=Marinomonas sp. (strain MWYL1) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22
Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 3
Query:  171 IDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            I  ++ R DL+  E Q  + D +  +A  A I  FL+ LR KGET  EI   A+ M   ++KV   L   VD  GTGGDG N  N+ST ++ + A+ G KVAK             DVLE  G+ + LD E V RCV+E G+GFM +  +H
Sbjct:    7 IAAVVERQDLSGGEMQVVMHDIMTGKATPAQIGGFLIGLRMKGETVEEITAAAQVMRSLSSKVHLDLEHVVDTCGTGGDGGNLFNVSTASAFVVASAGGKVAKHGGRSVSSKSGSADVLEQAGIYLGLDAEQVCRCVEEIGLGFMFAPNHH 157          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_HALMA (Anthranilate phosphoribosyltransferase OS=Haloarcula marismortui GN=trpD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22
Identity = 64/155 (41.29%), Postives = 85/155 (54.84%), Query Frame = 3
Query:  165 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV----EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            E I+ +    DLT+AEA+A    +  +A EA I A L  LRAKGET  EI G A  M   A  +    EGL   VD  GTGGD  NT+N+ST ++I+AA  G  +AK             DVLE +GV I+ +P  V   ++  GIGFM++  +H
Sbjct:    3 EYIERVTDGDDLTQAEARAVATTVFEDATEAQIGALLTALRAKGETEAEIAGFAEGMRDAARTIRPDREGL---VDTCGTGGDDYNTINVSTTSAIVAAGAGVPIAKHGNYSVSSSSGSADVLEEVGVDIEAEPPDVEETIERDGIGFMLAPVFH 154          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_GEOKA (Anthranilate phosphoribosyltransferase OS=Geobacillus kaustophilus GN=trpD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22
Identity = 55/141 (39.01%), Postives = 83/141 (58.87%), Query Frame = 3
Query:  198 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            LTE EA A+++ +++ EA ++ I++ L +LR +GET  E+VG  RAM    T +E   D +D  GTGGDGA T N+ST A+I+ ++ G KVAK             DVLE LG+ I   P   ++ ++  G+ F+ +  YH
Sbjct:   15 LTEDEAYAAMNIIMSGEATDSQIASLLSMLRLRGETVDELVGFVRAMRDRMTAIEASDDVIDTCGTGGDGAATFNVSTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGIDIQTSPSAAKQALETKGLAFLFAPLYH 155          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_VIBVU (Anthranilate phosphoribosyltransferase OS=Vibrio vulnificus GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.715e-22
Identity = 60/152 (39.47%), Postives = 86/152 (56.58%), Query Frame = 3
Query:  168 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +I+ L  +  LTE E+Q   D ++  E D  L+++ L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ + +  E  R  VD  G+ F+ + +YH
Sbjct:    4 IINKLYQQASLTEQESQQLFDTIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANAQPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRSAVDNIGVAFLFAPQYH 155          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_DESOH (Anthranilate phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.715e-22
Identity = 61/155 (39.35%), Postives = 83/155 (53.55%), Query Frame = 3
Query:  159 FNELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            F++ +  +I+R DL+  E      D       +A I AF+  L  KGETF E+ G A AM + AT+++     V D  GTGGDGA+T NIST ++ + A  G  VAK             DVLEALGV +D  PE     V+E GIGF+ +  +H
Sbjct:    2 FSQTLSKIINRKDLSREEMDRIFSDIFSGNLTDAQIGAFMAALATKGETFEELAGAAEAMRRKATRIQAASPVVVDTCGTGGDGAHTFNISTTSAFVVAGAGICVAKHGNRSVSSKCGSADVLEALGVKLDTQPEVAEEAVNEIGIGFLFAPLFH 156          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_BACCA (Anthranilate phosphoribosyltransferase (Fragment) OS=Bacillus caldotenax GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.715e-22
Identity = 55/141 (39.01%), Postives = 83/141 (58.87%), Query Frame = 3
Query:  198 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            LTE EA A+++ +++ EA ++ I++ L +LR +GET  E+VG  RAM    T +E   D +D  GTGGDGA T N+ST A+I+ ++ G KVAK             DVLE LG+ I   P   ++ ++  G+ F+ +  YH
Sbjct:   15 LTEDEAYAAMNIIMSGEATDSQIASLLSMLRLRGETVDELVGFVRAMRDRMTAIEASDDVIDTCGTGGDGAATFNVSTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGIDIHTSPSAAKQALETKGLAFLFAPLYH 155          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_AZOBR (Anthranilate phosphoribosyltransferase OS=Azospirillum brasilense GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.715e-22
Identity = 60/141 (42.55%), Postives = 81/141 (57.45%), Query Frame = 3
Query:  198 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            L EAEA  + D +++  A  + +  FL+ LR +GET  EI G AR M   A  VE     +D  GTGGDG+ T NIST A+++ AACG  VAK             DVL ALGV +D D   VR+ + +A IGF+M+ ++H
Sbjct:   27 LNEAEASLAFDIIMSGNATPSQMGGFLMALRVRGETVDEITGAARVMRAKAIPVEAPDGTIDTCGTGGDGSGTYNISTAAAVVIAACGVPVAKHGNRAMSSKSGAADVLGALGVNLDCDLGLVRKALWDARIGFLMAPRHH 167          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_ACIAC (Anthranilate phosphoribosyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.715e-22
Identity = 60/128 (46.88%), Postives = 75/128 (58.59%), Query Frame = 3
Query:  243 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            E    + +A +  LR K ET GEI   A+ M + + KV  + D    VDIVGTGGDGANT NIST A  +AAA GAK AK             DV+E+LGV IDL PE + RC+ + GIGFM +  +H
Sbjct:   34 ELSPVMTAAIVTGLRVKKETIGEITAAAQVMRELSRKV-AVADTTHLVDIVGTGGDGANTFNISTCAMFVAAAAGAKTAKHGGRGVSSKSGSADVMESLGVHIDLPPEAIARCIADTGIGFMFAPNHH 160          
The following BLAST results are available for this feature:
BLAST of CX291468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PSEPF2.178e-2238.93Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_LEIXX2.178e-2240.51Anthranilate phosphoribosyltransferase OS=Leifsoni... [more]
TRPD_MARMS2.845e-2240.40Anthranilate phosphoribosyltransferase OS=Marinomo... [more]
TRPD_HALMA2.845e-2241.29Anthranilate phosphoribosyltransferase OS=Haloarcu... [more]
TRPD_GEOKA2.845e-2239.01Anthranilate phosphoribosyltransferase OS=Geobacil... [more]
TRPD_VIBVU3.715e-2239.47Anthranilate phosphoribosyltransferase OS=Vibrio v... [more]
TRPD_DESOH3.715e-2239.35Anthranilate phosphoribosyltransferase OS=Desulfoc... [more]
TRPD_BACCA3.715e-2239.01Anthranilate phosphoribosyltransferase (Fragment) ... [more]
TRPD_AZOBR3.715e-2242.55Anthranilate phosphoribosyltransferase OS=Azospiri... [more]
TRPD_ACIAC3.715e-2246.88Anthranilate phosphoribosyltransferase OS=Acidovor... [more]

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Properties
Property NameValue
Genbank descriptionC03009A02SK OF2 Citrus clementina cDNA clone C03009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291468 ID=CX291468; Name=CX291468; organism=Citrus clementina; type=EST; length=619bp
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTCCATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTCAAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACG
AAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGA
CCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCATGA
TGTCGACAAAGTATCACCC
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