CX291468

Overview
NameCX291468
Unique NameCX291468
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length619
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_DESDG (Anthranilate phosphoribosyltransferase OS=Desulfovibrio desulfuricans (strain G20) GN=trpD PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.183e-14
Identity = 52/153 (33.99%), Postives = 77/153 (50.33%), Query Frame = 3
Query:  165 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            E+++ L S   L    A  + D L++ E   A   +FL+ LR+ GET   +    RA + +A  ++GL  D +DIVGTGGDG N+ N ST A++  A  G KV K             DV+E LG+ ++  PE V   +      F+ +  YH
Sbjct:    5 EILETLASGGVLPPETAHMAFDRLMSGEMTPAQAGSFLMGLRSHGETPELVASAVRAALAHARLIQGLEYDRIDIVGTGGDGRNSFNCSTAAALTLAGMGYKVVKHGNRAVSSTSGSADVVEGLGLPLETAPEDVPVLLARHNFVFLFAPFYH 157          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_BUCAT (Anthranilate phosphoribosyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=trpD PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.183e-14
Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  261 ISAFLVLLRAKGETFGEIVGLARAMI---KYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +++ L  ++ +GE+  EI G  +A +   KY  K + +    DIVGTGGD  NT+NIST ++ +AA CG K+ K             D+LE   + ++  PE  R+ +D+  I F+ + KYH
Sbjct:   36 LASILTAMKIRGESIEEITGAIKAFLDKMKYFPKPDYIFS--DIVGTGGDAKNTINISTMSAFVAATCGLKIIKHCNQRISSKSGSSDILEKFNINLNASPEKSRKTLDQLNICFLFAPKYH 155          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_BUCAI (Anthranilate phosphoribosyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=trpD PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.183e-14
Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  261 ISAFLVLLRAKGETFGEIVGLARAMI---KYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +++ L  ++ +GE+  EI G  +A +   KY  K + +    DIVGTGGD  NT+NIST ++ +AA CG K+ K             D+LE   + ++  PE  R+ +D+  I F+ + KYH
Sbjct:   36 LASILTAMKIRGESIEEITGAIKAFLDKMKYFPKPDYIFS--DIVGTGGDAKNTINISTMSAFVAATCGLKIIKHCNQRISSKSGSSDILEKFNINLNASPEKSRKTLDQLNICFLFAPKYH 155          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_BUCA5 (Anthranilate phosphoribosyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=trpD PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.183e-14
Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  261 ISAFLVLLRAKGETFGEIVGLARAMI---KYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +++ L  ++ +GE+  EI G  +A +   KY  K + +    DIVGTGGD  NT+NIST ++ +AA CG K+ K             D+LE   + ++  PE  R+ +D+  I F+ + KYH
Sbjct:   36 LASILTAMKIRGESIEEITGAIKAFLDKMKYFPKPDYIFS--DIVGTGGDAKNTINISTMSAFVAATCGLKIIKHCNQRISSKSGSSDILEKFNINLNASPEKSRKTLDQLNICFLFAPKYH 155          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_STRSV (Anthranilate phosphoribosyltransferase OS=Streptococcus sanguinis (strain SK36) GN=trpD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14
Identity = 53/153 (34.64%), Postives = 81/153 (52.94%), Query Frame = 3
Query:  165 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            E+I  L    DL+ AE    ++ ++     E+ I AFL+ L+ KGET  E   LA+ M  +A ++   +  A+D  GTGGD + + NIST A+ + A  G K+AK             DVLEALG+ +DLD   + +  ++ GI F+ +   H
Sbjct:    3 EIIAKLADFKDLSSAEMTDVIERIVTGRVTESQIVAFLLGLKMKGETIEERTALAQVMRGHAKQIPTTIRTAMDNCGTGGDKSFSFNISTTAAFVLAGGGIKMAKHGNRSISSKSGSADVLEALGINLDLDAASLGKVFEQTGIVFLFAKNMH 155          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_GLUOX (Anthranilate phosphoribosyltransferase OS=Gluconobacter oxydans GN=trpD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14
Identity = 47/142 (33.10%), Postives = 74/142 (52.11%), Query Frame = 3
Query:  198 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            L   EA+ +   ++  E D   ++AFL  L+ +GETF E+ G  +A+  + T +  +   A+D+ GTGGDG  T+N+ST  + + A  G  VAK             DVLE LG+    D E   R + E G+ F+ + ++H
Sbjct:   20 LDSHEAETAFHAIMAGEVDPVQLAAFLTALKLRGETFAELTGAVQAVRHHMTVLPDVPAGAIDVCGTGGDGLKTLNVSTAVAFVLAGLGVPVAKHGNRALSSASGATDVLEVLGIPPTDDLELQGRRLREDGLVFLAAPQHH 161          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_FLAPJ (Anthranilate phosphoribosyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=trpD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14
Identity = 46/152 (30.26%), Postives = 82/152 (53.95%), Query Frame = 3
Query:  168 LIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +++ LI+   L++ EA+  L  + N + + + I++FL +   +  T  E+ G   A+++    ++    + +D+ GTGGDG +T NIST AS + A  G KVAK             +V+E LG+    DP  + +C+D+AGI  + +  +H
Sbjct:    4 ILNRLINHETLSKQEAKNMLVNISNGSYNPSQIASFLTVYMMRNITINELAGFREALLELCIPIDLSAYNTIDLCGTGGDGKDTFNISTLASFVTAGAGIKVAKHGNYGVSSISGSSNVMENLGIKFSNDPIFLEKCIDQAGICVLHAPLFH 155          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_SYNY3 (Anthranilate phosphoribosyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=trpD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.724e-14
Identity = 53/162 (32.72%), Postives = 81/162 (50.00%), Query Frame = 3
Query:  144 PQTPCFNELIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEG---LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            P  P   +L+D    R  LT  +A   ++ +L ++   AL  A L  ++AKG    E+ G+A+ + + +   +G   +   VD  GTGGDG++T NIST  + + AA G KVAK             DVLEALG+ +    + V   V   GI F+ +  +H
Sbjct:    8 PWPPFLQQLLD----RQSLTRQQAVQLMEGWLDDDIPPALSGAILAAIQAKGLDPEELTGMAQVLQEQSQGNQGREMVAPLVDTCGTGGDGSSTFNISTAVAFVVAAAGVKVAKHGNRSASSKVGSADVLEALGLNLQAGADQVAAAVSAVGITFLFAPGWH 165          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_LEPIN (Anthranilate phosphoribosyltransferase OS=Leptospira interrogans GN=trpD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.724e-14
Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 3
Query:  180 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            LI    LT  EA++ +++++  E  E L+S+FL  +R  GE+  E++G   A+ K A + + +   D +D  GTGGDG  T+NIST ++I+ A+ G KVAK             D+L  LG   +   E V   +   G  F+ +  +H
Sbjct:   10 LIEHKHLTTLEAESFMNHVMKGEVSEILLSSFLTAMRFNGESVEEVLGCTLALRKNALRPKTVFPFDLLDTCGTGGDGQGTINISTLSAIVLASLGIKVAKHGNRSVSSHTGSSDILTRLGYQTETTQEEVEAHLVNRGFTFLFAPMWH 158          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_LEPIC (Anthranilate phosphoribosyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=trpD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.724e-14
Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 3
Query:  180 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            LI    LT  EA++ +++++  E  E L+S+FL  +R  GE+  E++G   A+ K A + + +   D +D  GTGGDG  T+NIST ++I+ A+ G KVAK             D+L  LG   +   E V   +   G  F+ +  +H
Sbjct:   10 LIEHKHLTALEAESFMNHVMKGEVSEILLSSFLTAMRFNGESVEEVLGCTLALRKNALRPKTVFPFDLLDTCGTGGDGQGTINISTLSAIVLASLGIKVAKHGNRSVSSHTGSSDILTRLGYQTETTQEEVEAHLVNRGFTFLFAPMWH 158          
The following BLAST results are available for this feature:
BLAST of CX291468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_DESDG2.183e-1433.99Anthranilate phosphoribosyltransferase OS=Desulfov... [more]
TRPD_BUCAT2.183e-1434.43Anthranilate phosphoribosyltransferase OS=Buchnera... [more]
TRPD_BUCAI2.183e-1434.43Anthranilate phosphoribosyltransferase OS=Buchnera... [more]
TRPD_BUCA52.183e-1434.43Anthranilate phosphoribosyltransferase OS=Buchnera... [more]
TRPD_STRSV2.851e-1434.64Anthranilate phosphoribosyltransferase OS=Streptoc... [more]
TRPD_GLUOX2.851e-1433.10Anthranilate phosphoribosyltransferase OS=Gluconob... [more]
TRPD_FLAPJ2.851e-1430.26Anthranilate phosphoribosyltransferase OS=Flavobac... [more]
TRPD_SYNY33.724e-1432.72Anthranilate phosphoribosyltransferase OS=Synechoc... [more]
TRPD_LEPIN3.724e-1432.89Anthranilate phosphoribosyltransferase OS=Leptospi... [more]
TRPD_LEPIC3.724e-1432.89Anthranilate phosphoribosyltransferase OS=Leptospi... [more]

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Properties
Property NameValue
Genbank descriptionC03009A02SK OF2 Citrus clementina cDNA clone C03009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291468 ID=CX291468; Name=CX291468; organism=Citrus clementina; type=EST; length=619bp
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTCCATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTCAAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACG
AAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGA
CCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCATGA
TGTCGACAAAGTATCACCC
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