CX291468

Overview
NameCX291468
Unique NameCX291468
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length619
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_DESPS (Anthranilate phosphoribosyltransferase OS=Desulfotalea psychrophila GN=trpD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.184e-24
Identity = 67/151 (44.37%), Postives = 90/151 (59.60%), Query Frame = 3
Query:  180 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGD---AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +++  DL+E+E  AS++ +++ +A  A I++F+  LR KGE   EIVG  R M   AT ++ GLG     +DIVGTGGDGA+T N+ST  S + AA G  VAK             DVLEALGV + LDP  V R V E GIGF+ +   H
Sbjct:   19 VVTGADLSESEMMASMEEVMSGQASPAQIASFITALRMKGEAVEEIVGAVRVMRDKATFIDCGLGPDDILMDIVGTGGDGADTFNVSTTTSFVVAAAGVAVAKHGNRAVSSRCGSADVLEALGVDLSLDPATVARSVQEIGIGFLFAPLLH 169          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_RHIEC (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.771e-24
Identity = 63/145 (43.45%), Postives = 83/145 (57.24%), Query Frame = 3
Query:  186 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG    M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV ID+ PE + RC+ EA +GFM +  +H
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLSALGVNIDVGPEIISRCIAEASVGFMFAQLHH 157          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_RHIE6 (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CIAT 652) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.771e-24
Identity = 63/145 (43.45%), Postives = 83/145 (57.24%), Query Frame = 3
Query:  186 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG    M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV ID+ PE + RC+ EA +GFM +  +H
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLSALGVNIDVGPEIISRCIAEASVGFMFAQLHH 157          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPK (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain KT2440) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.771e-24
Identity = 62/149 (41.61%), Postives = 85/149 (57.05%), Query Frame = 3
Query:  180 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H
Sbjct:   10 IVGQLDLTTEEMREVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHH 158          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_PSEP1 (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.771e-24
Identity = 62/149 (41.61%), Postives = 85/149 (57.05%), Query Frame = 3
Query:  180 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H
Sbjct:   10 IVGQLDLTTEEMREVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHH 158          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_MYCGI (Anthranilate phosphoribosyltransferase OS=Mycobacterium gilvum (strain PYR-GCK) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.771e-24
Identity = 69/172 (40.12%), Postives = 94/172 (54.65%), Query Frame = 3
Query:  114 PQPAVSDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            P+PA        TP +  ++  L +   L   +   ++D ++   A  A I+AF V ++ K  T  E+  LA  M+K+A  V  + +G   VDIVGTGGDGANTVN+ST ASI+ AA G  V K             D LEALG+ IDL P+ V RCV E GIGF  + ++H
Sbjct:    6 PRPAAPTTDPGDTPTWAMILGRLTTGQSLLPGQTAWAMDQIMTGVATPAQIAAFAVSMKMKRPTSAEVTELAEIMLKHALPVPTDTIGTHTVDIVGTGGDGANTVNLSTMASIVVAAAGVPVVKHGNRAASSLSGGADTLEALGLRIDLGPDDVARCVAEVGIGFAFAPQFH 177          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSL (Anthranilate phosphoribosyltransferase OS=Geobacter sulfurreducens GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.771e-24
Identity = 67/162 (41.36%), Postives = 91/162 (56.17%), Query Frame = 3
Query:  180 LISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV---EGLGDA------------VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            ++ R+DLTEAE    +D +++  A  A I+AF+  LR KGET  EI G AR M   AT +   +G+ D             +D+VGTGGDG NT NIST  S + A+CG KVAK             DVLE+LGV +D+ PE V + + + GIGF+ +   H
Sbjct:    9 VVERIDLTEAEMIEVMDQIMSGGATPAQIAAFITALRMKGETVEEITGAARVMRDRATPIRVGKGVLDIDRDDINIDQETILDVVGTGGDGTNTFNISTTVSFVVASCGVKVAKHGNRAVSSACGSADVLESLGVNLDVTPETVEQAIAKIGIGFLFAPALH 170          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_SALRD (Anthranilate phosphoribosyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.843e-24
Identity = 64/154 (41.56%), Postives = 90/154 (58.44%), Query Frame = 3
Query:  162 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            N L+  +     L+  EA+ ++  +++  A +  I+A L+ LR +GET  E+VG  + M ++A  VE      +D+ GTGGDGA+T NIST AS +AA  GA VAK             DVLEALGV IDL+ EGV  C+ EAGI F+ +  +H
Sbjct:    2 NTLLQTIADGDPLSRPEAEEAMATMMSGSARDEHIAALLMGLRTRGETLDELVGFTKTMREFAVSVETDDPQTIDLCGTGGDGASTFNISTTASFIAAGAGATVAKHGNRSVSSQSGSADVLEALGVQIDLEKEGVEHCLHEAGIAFLFAPFFH 155          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_ROSS1 (Anthranilate phosphoribosyltransferase OS=Roseiflexus sp. (strain RS-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.843e-24
Identity = 64/142 (45.07%), Postives = 82/142 (57.75%), Query Frame = 3
Query:  195 DLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            DL+E +A  +++ ++   A  A ++A L  L  KGET  EI G+AR M   A  V      +D  GTGGDGA T NIST A+ +AA  GA VAK             DVLE LGV I+LD   V RC+D+AGIGFM + K+H
Sbjct:   15 DLSEDQAAEAMEEIMTGMATPAQVAALLTALHLKGETDAEIAGMARVMRAKAIPVHFDAPLLDTCGTGGDGAGTFNISTTAAFIAAGAGAIVAKHGNRAMSSVCGSADVLEGLGVNIELDAASVARCLDQAGIGFMFAQKFH 156          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP2 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=trpD PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 8.843e-24
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 3
Query:  159 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            F  +I  + +   LT  EA  + D +++ +A  + + A L+ LR +GET  EI G    M      V    DAVD+VGTGGDG+ +VN+ST  S + A CG  VAK             DVL ALGV ID+ P+ V RCV EAGIGFM +  +H
Sbjct:    4 FKAVIAKVATGASLTRDEAANAFDAMMSGDATPSQMGALLMGLRVRGETVDEITGAVTTMRAKMLTVAAPPDAVDVVGTGGDGSGSVNVSTCTSFVVAGCGVPVAKHGNRALSSKSGAADVLNALGVKIDITPDHVGRCVAEAGIGFMFAPTHH 157          
The following BLAST results are available for this feature:
BLAST of CX291468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_DESPS5.184e-2444.37Anthranilate phosphoribosyltransferase OS=Desulfot... [more]
TRPD_RHIEC6.771e-2443.45Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_RHIE66.771e-2443.45Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_PSEPK6.771e-2441.61Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEP16.771e-2441.61Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_MYCGI6.771e-2440.12Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_GEOSL6.771e-2441.36Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_SALRD8.843e-2441.56Anthranilate phosphoribosyltransferase OS=Saliniba... [more]
TRPD_ROSS18.843e-2445.07Anthranilate phosphoribosyltransferase OS=Roseifle... [more]
TRPD_RHOP28.843e-2441.56Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]

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Properties
Property NameValue
Genbank descriptionC03009A02SK OF2 Citrus clementina cDNA clone C03009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291468 ID=CX291468; Name=CX291468; organism=Citrus clementina; type=EST; length=619bp
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTCCATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTCAAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACG
AAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGA
CCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCATGA
TGTCGACAAAGTATCACCC
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