CX291469

Overview
NameCX291469
Unique NameCX291469
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: CP21A_HUMAN (Steroid 21-hydroxylase OS=Homo sapiens GN=CYP21A2 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11
Identity = 47/161 (29.19%), Postives = 75/161 (46.58%), Query Frame = 3 
Query:   21 VQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESK--SDLFMAKPLHARAMPR 497
            V   D   L  + A + E  R+ PVVP  +PH +T  ++I+GY IP+G+ ++ + QG   +  VWE P +F P+R +    +           + ++F  G R C+G  L      ++L RLL  F   +PS +    L      S +   +P   R  PR
Sbjct:  334 VPYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSISGYDIPEGTVIIPNLQGAHLDETVWERPHEFWPDRFLEPGKNS----------RALAFGCGARVCLGEPLARLELFVVLTRLLQAFT-LLPSGDALPSLQPLPHCSVILKMQPFQVRLQPR 483
The following BLAST results are available for this feature:
BLAST of CX291469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
CP21A_HUMAN8.832e-1129.19Steroid 21-hydroxylase OS=Homo sapiens GN=CYP21A2 ... [more]

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Properties
Property NameValue
Genbank descriptionC03009A03SK OF2 Citrus clementina cDNA clone C03009A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291469 ID=CX291469; Name=CX291469; organism=Citrus clementina; type=EST; length=723bp
TTGTTGGAAAAGGGAGACTTGTTCAAGAATCAGACATCCCCCATCTCAAC
TACGTCAAGGCTTGTTTAAGGGAAGCTTTTCGCATTCATCCCGTTGTACC
ATTTAACGTACCTCATGTCTCAACATGTGACGCCACAATTGCTGGGTACT
TCATTCCAAAAGGCAGTCATGTTTTGCTAAGCCGACAAGGGCTCGGTCGG
AACCCCGAAGTTTGGGAAGATCCTTTAAAATTCAAACCAGAACGCCATAT
TAATTTGGCAGATCATCATCATCAAGTTGAGCTCACCGAACCAGAATTAA
AATTCATTTCATTTAGTAGAGGAAGACGTGGTTGCATGGGCGTGGCACTT
GGGTCTGAGATGACTGTAATGTTATTGGCAAGACTTCTTCATGGATTTGA
TTGGAGCGTGCCATCGAACGAGGAGAAAATTGATTTAGCAGAGTCGAAAT
CTGATCTCTTTATGGCTAAACCCTTGCATGCACGTGCAATGCCTCGTTTG
CCTGCTGAGCTATACCCGGCCTAATTCCTAATATAAAATATGTACCCAGT
ATCGAAATAAAATAGCTGTCGAAATACAAAAGTTCGAAGTAGAACAAATA
ATTGCTGATGCAAACCAAGCCTTTGTTTTCATGATGTGAATTCCATGAAA
CATGAAAAGAATAAATCAATAAATCGAAATTATGGGTAAAAAAAAAAAAA
AAAAACTCGAGGGGGGGCCCGGT
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