CX291469

Overview
NameCX291469
Unique NameCX291469
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 3
Query:   18 LVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPS--NEEKIDLAE 443
            +V E ++P +  +KA ++E  R+HP VP  +PH S     +AGY IP  + V+++   LGR+   WE   +F PER ++  D    V+L   E +F++F  GRR C GV   S     +L+ L++ FDW +P+    E +D+ E
Sbjct:  377 MVTEDNLPGMTDLKAVIKETLRLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLS-GDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTE 519          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 51/144 (35.42%), Postives = 79/144 (54.86%), Query Frame = 3
Query:   21 VQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPS--NEEKIDLAES 446
            + E DI  L Y+K  ++E  RI+P+VP   P  ++ D  I GY IPK + + ++   + RNP VW+DP  F PER ++     +Q++      + + F  GRR C G+ +G  +  + L  LL+ FDW +P     E +DL ES
Sbjct:  337 ITEEDIEGLEYLKMVVKETLRINPLVPLLTPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMD-----NQIDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEES 475          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 51/161 (31.68%), Postives = 85/161 (52.80%), Query Frame = 3
Query:   21 VQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKSDLF-MAKPLHARAMPRL 500
            + E D+  + Y+K  + EAFR+HP  P  +P ++  D  I GY IPK + + ++   +GR+P+ W  P +F PER ++     + +E      + + F  GRR C G+A G  +  + L  LL+ FDWS+P+     D+   +   F +AK +    +P L
Sbjct:  340 ITEEDLEKVEYLKMVIEEAFRLHPPAPLLLPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFVD-----NPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSLPNGMTTKDIDMEEDGAFVIAKKVSLELVPTL 495          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19
Identity = 48/147 (32.65%), Postives = 79/147 (53.74%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAE 443
            +G G  V E D+  L Y++A ++E  R+   +P  VPH++  DA +AGY IP  S +L++   L  NP  W+ P +F+PER      H   VE    + +++ F  GRR C G+ L   +  + + R++  F+   P  + K+D +E
Sbjct:  340 LGPGVQVTEPDLHKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESH---VEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVDTSE 483          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: CP1A2_CALJA (Cytochrome P450 1A2 OS=Callithrix jacchus GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19
Identity = 53/145 (36.55%), Postives = 82/145 (56.55%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDL 437
            +G+GR  + SD P L Y++A + E FR    VPF +PH +T D T+ G++IPK   V +++  +  +P++W DP +F+PER +          L+E   K + F  G+R C+G  LG     + LA LL   ++SVP   + IDL
Sbjct:  351 IGRGRRPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTTRDTTLKGFYIPKECCVFINQWQVNHDPQLWGDPSEFRPERFLTAKGTALNKPLSE---KILLFGLGKRRCIGEVLGKWEVFLFLAILLQQLEFSVPPGVQ-IDL 491          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19
Identity = 50/147 (34.01%), Postives = 84/147 (57.14%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAE 443
            VGK R+V+ESDI +L Y++  +RE  R+HP  P  +   S+  A + GY IP  + + ++   +GR+P  WE+PL+F+PER +   +   Q+++       + F  GRR C G +L  ++  + LA L+  F W V  +  K+++ E
Sbjct:  341 VGKSRIVEESDIANLPYLQGIVRETLRLHPAGPL-LFRESSRRAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVE--NGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKVDCDNGKVNMEE 484          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19
Identity = 52/166 (31.33%), Postives = 84/166 (50.60%), Query Frame = 3
Query:   21 VQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKSDLFMAKPLHARAMPRLPAELYP 518
            + E D+  ++Y+K  + E FR+HP  P  +P  +  D  I GY IPK + + ++   +GR+P  WE+P  F PER I+       VE      + + F  GRR C G+A G  +  + L  +L+ FDWS+P   +  D+   ++  F+          ++P EL P
Sbjct:  342 ITEQDLEKVHYLKLVIEETFRLHPPAPLLLPRETMSDLKIQGYNIPKNTMIEINTYSIGRDPNCWENPNDFNPERFID-----SPVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSLPDGMKIEDIDMEEAGAFV-------VAKKVPLELIP 495          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19
Identity = 50/163 (30.67%), Postives = 85/163 (52.15%), Query Frame = 3
Query:   21 VQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDL-AESKSDLFMAKPLHARAMP-RLP 503
            + + D+  + ++   ++E FR+HPV P  +P  +     + GY IP    +L++   +GR+P++W DP +FKPER I+       V+      + + F  GRR C G+A+G     + L  LL+ FDW +P      D+  E    L + K +H + +P R+P
Sbjct:  345 ITKEDLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFID-----SPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDIDTEEAGTLTVVKKVHLKLVPVRVP 502          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.775e-19
Identity = 50/147 (34.01%), Postives = 78/147 (53.06%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAE 443
            +G G  V E DI  L Y++A ++E  R+   +P  VPH++  DA + GY IP  S +L++   L  NP  W+ P +F+PER      H   VE    + +++ F  GRR C G+ L   +  + L RL+  F+   P  + +ID +E
Sbjct:  340 LGVGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESH---VEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSE 483          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: CP1A2_PONAB (Cytochrome P450 1A2 OS=Pongo abelii GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 1.775e-19
Identity = 54/145 (37.24%), Postives = 82/145 (56.55%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDL 437
            +G+GR  + SD P L Y+KA + E FR    +PF +PH +T D T+ G++IPK   V +++  +  +PE+WEDP +F PER +          L+E   K + F  G+R C+G  L +    + LA LL   ++SVP    K+DL
Sbjct:  351 IGRGRRPRLSDRPQLPYLKAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKECCVFVNQWQVNHDPELWEDPSEFWPERFLTTDGTAINKPLSE---KVMLFGMGKRRCIGEVLANWEVFLFLAILLQQLEFSVPPG-VKVDL 491          
The following BLAST results are available for this feature:
BLAST of CX291469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
C71C4_MAIZE1.041e-1935.42Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71BD_ARATH1.041e-1935.42Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71B5_ARATH1.041e-1931.68Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_ARATH1.359e-1932.65Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
CP1A2_CALJA1.359e-1936.55Cytochrome P450 1A2 OS=Callithrix jacchus GN=CYP1A... [more]
C93A3_SOYBN1.359e-1934.01Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71BM_ARATH1.359e-1931.33Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH1.359e-1930.67Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
TCMO_PHAAU1.775e-1934.01Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
CP1A2_PONAB1.775e-1937.24Cytochrome P450 1A2 OS=Pongo abelii GN=CYP1A2 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC03009A03SK OF2 Citrus clementina cDNA clone C03009A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291469 ID=CX291469; Name=CX291469; organism=Citrus clementina; type=EST; length=723bp
TTGTTGGAAAAGGGAGACTTGTTCAAGAATCAGACATCCCCCATCTCAAC
TACGTCAAGGCTTGTTTAAGGGAAGCTTTTCGCATTCATCCCGTTGTACC
ATTTAACGTACCTCATGTCTCAACATGTGACGCCACAATTGCTGGGTACT
TCATTCCAAAAGGCAGTCATGTTTTGCTAAGCCGACAAGGGCTCGGTCGG
AACCCCGAAGTTTGGGAAGATCCTTTAAAATTCAAACCAGAACGCCATAT
TAATTTGGCAGATCATCATCATCAAGTTGAGCTCACCGAACCAGAATTAA
AATTCATTTCATTTAGTAGAGGAAGACGTGGTTGCATGGGCGTGGCACTT
GGGTCTGAGATGACTGTAATGTTATTGGCAAGACTTCTTCATGGATTTGA
TTGGAGCGTGCCATCGAACGAGGAGAAAATTGATTTAGCAGAGTCGAAAT
CTGATCTCTTTATGGCTAAACCCTTGCATGCACGTGCAATGCCTCGTTTG
CCTGCTGAGCTATACCCGGCCTAATTCCTAATATAAAATATGTACCCAGT
ATCGAAATAAAATAGCTGTCGAAATACAAAAGTTCGAAGTAGAACAAATA
ATTGCTGATGCAAACCAAGCCTTTGTTTTCATGATGTGAATTCCATGAAA
CATGAAAAGAATAAATCAATAAATCGAAATTATGGGTAAAAAAAAAAAAA
AAAAACTCGAGGGGGGGCCCGGT
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