CX291470

Overview
NameCX291470
Unique NameCX291470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_BACC1 (Phosphoglycerate kinase OS=Bacillus cereus (strain ATCC 10987) GN=pgk PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26
Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  303 YADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_BACC0 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH820) GN=pgk PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26
Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  303 YADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_BACAN (Phosphoglycerate kinase OS=Bacillus anthracis GN=pgk PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26
Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  303 YADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_BACAH (Phosphoglycerate kinase OS=Bacillus thuringiensis (strain Al Hakam) GN=pgk PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26
Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  303 YADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_BACAC (Phosphoglycerate kinase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=pgk PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26
Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  303 YADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_BACAA (Phosphoglycerate kinase OS=Bacillus anthracis (strain A0248) GN=pgk PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26
Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  303 YADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_LEUMM (Phosphoglycerate kinase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=pgk PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.593e-26
Identity = 53/91 (58.24%), Postives = 72/91 (79.12%), Query Frame = 1
Query:   28 EALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            + L   KT++WNGPMGVFE   FA GT AI ++L +++  G TTI+GGGDS AAV+++G+ADK++HISTGGGASLE LEGK LPG+ ++ +
Sbjct:  314 DTLSDAKTVVWNGPMGVFEMSNFAKGTLAIGEELVKVTENGGTTIVGGGDSTAAVQQLGVADKLTHISTGGGASLEYLEGKELPGIASISE 404          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_LEUCK (Phosphoglycerate kinase OS=Leuconostoc citreum (strain KM20) GN=pgk PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.593e-26
Identity = 54/91 (59.34%), Postives = 72/91 (79.12%), Query Frame = 1
Query:   28 EALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            + L   KT++WNGPMGVFE   FA GT AI ++L +++  G TTI+GGGDS AAV+++G+ADK+SHISTGGGASLE LEGK LPG+ ++ +
Sbjct:  314 DTLADAKTVVWNGPMGVFEMPNFAKGTLAIGEELVKVTENGGTTIVGGGDSTAAVQQLGVADKLSHISTGGGASLEYLEGKELPGIASISE 404          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_LACS1 (Phosphoglycerate kinase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=pgk PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.593e-26
Identity = 57/93 (61.29%), Postives = 70/93 (75.27%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            F + L   KT++WNGPMGVFE   FA GT  + K L  LS    TTI+GGGDS AAV+++G+ADK++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  309 FEDTLKDAKTVVWNGPMGVFEMSNFAKGTLEVGKFLGTLSD--ATTIVGGGDSTAAVQQLGVADKLTHISTGGGASLEYLEGKTLPGIAAVSD 399          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CLOB8 (Phosphoglycerate kinase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=pgk PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.593e-26
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +++A+   KT+IWNGPMGVFEF+ +  GT A+AK +A+      TTIIGGGDS AAV  +G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  302 YADAIKDAKTVIWNGPMGVFEFENYNKGTIAVAKAMADADA---TTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKVLPGIAALND 391          
The following BLAST results are available for this feature:
BLAST of CX291470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACC11.986e-2659.14Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC01.986e-2659.14Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACAN1.986e-2659.14Phosphoglycerate kinase OS=Bacillus anthracis GN=p... [more]
PGK_BACAH1.986e-2659.14Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]
PGK_BACAC1.986e-2659.14Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_BACAA1.986e-2659.14Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_LEUMM2.593e-2658.24Phosphoglycerate kinase OS=Leuconostoc mesenteroid... [more]
PGK_LEUCK2.593e-2659.34Phosphoglycerate kinase OS=Leuconostoc citreum (st... [more]
PGK_LACS12.593e-2661.29Phosphoglycerate kinase OS=Lactobacillus salivariu... [more]
PGK_CLOB82.593e-2661.29Phosphoglycerate kinase OS=Clostridium beijerincki... [more]

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Properties
Property NameValue
Genbank descriptionC03009A04SK OF2 Citrus clementina cDNA clone C03009A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291470 ID=CX291470; Name=CX291470; organism=Citrus clementina; type=EST; length=627bp
GATTCGGCCGAGGATCAGTCATTCAGTGAAGCTTTGGATACTACTAAAAC
CATCATCTGGAATGGACCTATGGGTGTGTTTGAATTTGATAAATTTGCTG
CTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCAGCGGGAAGGGA
GTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCCGTAGAGAAGGT
TGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGGTGGAGCCAGCT
TAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTGCTCTTGATGAT
GCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTGCCATTTCCAGA
GTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAAAGTTAAACTTT
ATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAAATAAATTCTTT
CTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGATCCCATTTTGG
AACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAAGTTCTTGTTCC
TTTCTGATCACAATGAGCCGTTGATGATTGTTAGATAATGCATGAATCCT
GGCACTACAAAAAAAAAAAAAAAAAAA
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