CX291470

Overview
NameCX291470
Unique NameCX291470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_PROM4 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=pgk PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.161e-34
Identity = 73/93 (78.49%), Postives = 80/93 (86.02%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            F +AL+  +T+IWNGPMGVFEFDKFA GT +IA  L+ LS KG  TIIGGGDSVAAVEK GLADKMSHISTGGGASLELLEGKTLPGV ALD+
Sbjct:  308 FQDALEDCQTVIWNGPMGVFEFDKFANGTNSIATTLSVLSQKGCCTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKTLPGVAALDE 400          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ACAM1 (Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=pgk PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.161e-34
Identity = 71/96 (73.96%), Postives = 81/96 (84.38%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 303
            + F  AL   KT+IWNGPMGVFEFDKFAAGT+A+A  LA ++  G  TIIGGGDSVAAVEKVG+A+KMSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  306 KEFQAALSDCKTVIWNGPMGVFEFDKFAAGTDAVAHSLAAITETGADTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKVLPGIAALDEA 401          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_PROM1 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=pgk PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.587e-34
Identity = 74/94 (78.72%), Postives = 77/94 (81.91%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 303
            F  AL   KT+IWNGPMGVFEF+KFA GT AIA  LAELS +G  TIIGGGDSVAAVEK GLA  MSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  308 FQNALKDCKTVIWNGPMGVFEFEKFANGTNAIANTLAELSAQGCCTIIGGGDSVAAVEKAGLAKNMSHISTGGGASLELLEGKVLPGVSALDDA 401          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_PROM2 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=pgk PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.284e-33
Identity = 76/95 (80.00%), Postives = 79/95 (83.16%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 303
            F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGKTLPGV AL+DA
Sbjct:  308 FQNALAECKTIIWNGPMGVFEFDKFAEGTNAIATTLADLSAFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALNDA 402          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_PROMS (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain AS9601) GN=pgk PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.677e-33
Identity = 76/95 (80.00%), Postives = 79/95 (83.16%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 303
            F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGKTLPGV AL+DA
Sbjct:  308 FQNALAECKTIIWNGPMGVFEFDKFADGTNAIATTLADLSAFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALNDA 402          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_PROM9 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=pgk PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.677e-33
Identity = 76/95 (80.00%), Postives = 79/95 (83.16%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 303
            F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGKTLPGV AL+DA
Sbjct:  308 FQNALAECKTIIWNGPMGVFEFDKFADGTNAIATTLADLSAFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALNDA 402          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_PROMP (Phosphoglycerate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=pgk PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.190e-33
Identity = 76/95 (80.00%), Postives = 78/95 (82.11%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 303
            F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGKTLPGV AL DA
Sbjct:  308 FQNALAECKTIIWNGPMGVFEFDKFAEGTNAIATTLADLSSFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALKDA 402          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.861e-33
Identity = 69/95 (72.63%), Postives = 80/95 (84.21%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            ++F +AL   KT++WNGPMGVFEF KFA GT AIA  L+EL+ KG  TIIGGGDSVAAVE+ G+A+KMSHISTGGGASLELLEGK LPGV ALD+
Sbjct:  367 KTFQDALADAKTVVWNGPMGVFEFPKFAVGTVAIANTLSELTPKGAITIIGGGDSVAAVEQAGVAEKMSHISTGGGASLELLEGKVLPGVAALDE 461          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_PROM0 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=pgk PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.323e-33
Identity = 75/95 (78.95%), Postives = 78/95 (82.11%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 303
            F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV AL+DA
Sbjct:  308 FQNALAECKTIIWNGPMGVFEFDKFADGTNAIATTLADLSAFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKILPGVAALNDA 402          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_PROM5 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=pgk PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.202e-32
Identity = 72/94 (76.60%), Postives = 77/94 (81.91%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            F  AL   KTIIWNGPMGVFEFDKFA GT +IA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV AL++
Sbjct:  308 FQNALAECKTIIWNGPMGVFEFDKFAEGTNSIATTLADLSSFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKNLPGVAALNE 401          
The following BLAST results are available for this feature:
BLAST of CX291470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROM41.161e-3478.49Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_ACAM11.161e-3473.96Phosphoglycerate kinase OS=Acaryochloris marina (s... [more]
PGK_PROM12.587e-3478.72Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM21.284e-3380.00Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROMS1.677e-3380.00Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM91.677e-3380.00Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROMP2.190e-3380.00Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGKH_VOLCA2.861e-3372.63Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGK_PROM08.323e-3378.95Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM59.202e-3276.60Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionC03009A04SK OF2 Citrus clementina cDNA clone C03009A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291470 ID=CX291470; Name=CX291470; organism=Citrus clementina; type=EST; length=627bp
GATTCGGCCGAGGATCAGTCATTCAGTGAAGCTTTGGATACTACTAAAAC
CATCATCTGGAATGGACCTATGGGTGTGTTTGAATTTGATAAATTTGCTG
CTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCAGCGGGAAGGGA
GTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCCGTAGAGAAGGT
TGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGGTGGAGCCAGCT
TAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTGCTCTTGATGAT
GCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTGCCATTTCCAGA
GTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAAAGTTAAACTTT
ATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAAATAAATTCTTT
CTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGATCCCATTTTGG
AACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAAGTTCTTGTTCC
TTTCTGATCACAATGAGCCGTTGATGATTGTTAGATAATGCATGAATCCT
GGCACTACAAAAAAAAAAAAAAAAAAA
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