CX291470

Overview
NameCX291470
Unique NameCX291470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SALSV (Phosphoglycerate kinase OS=Salmonella schwarzengrund (strain CVM19633) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQQLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SALPK (Phosphoglycerate kinase OS=Salmonella paratyphi A (strain AKU_12601) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQQLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SALPB (Phosphoglycerate kinase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQQLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SALPA (Phosphoglycerate kinase OS=Salmonella paratyphi A GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQQLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SALNS (Phosphoglycerate kinase OS=Salmonella newport (strain SL254) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQQLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SALHS (Phosphoglycerate kinase OS=Salmonella heidelberg (strain SL476) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQQLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SALG2 (Phosphoglycerate kinase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQQLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SALEP (Phosphoglycerate kinase OS=Salmonella enteritidis PT4 (strain P125109) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQQLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SALDC (Phosphoglycerate kinase OS=Salmonella dublin (strain CT_02021853) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQQLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
[Close]
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SALCH (Phosphoglycerate kinase OS=Salmonella choleraesuis GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1 
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQQLAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
The following BLAST results are available for this feature:
BLAST of CX291470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SALSV2.512e-2151.02Phosphoglycerate kinase OS=Salmonella schwarzengru... [more]
PGK_SALPK2.512e-2151.02Phosphoglycerate kinase OS=Salmonella paratyphi A ... [more]
PGK_SALPB2.512e-2151.02Phosphoglycerate kinase OS=Salmonella paratyphi B ... [more]
PGK_SALPA2.512e-2151.02Phosphoglycerate kinase OS=Salmonella paratyphi A ... [more]
PGK_SALNS2.512e-2151.02Phosphoglycerate kinase OS=Salmonella newport (str... [more]
PGK_SALHS2.512e-2151.02Phosphoglycerate kinase OS=Salmonella heidelberg (... [more]
PGK_SALG22.512e-2151.02Phosphoglycerate kinase OS=Salmonella gallinarum (... [more]
PGK_SALEP2.512e-2151.02Phosphoglycerate kinase OS=Salmonella enteritidis ... [more]
PGK_SALDC2.512e-2151.02Phosphoglycerate kinase OS=Salmonella dublin (stra... [more]
PGK_SALCH2.512e-2151.02Phosphoglycerate kinase OS=Salmonella choleraesuis... [more]

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Properties
Property NameValue
Genbank descriptionC03009A04SK OF2 Citrus clementina cDNA clone C03009A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291470 ID=CX291470; Name=CX291470; organism=Citrus clementina; type=EST; length=627bp
GATTCGGCCGAGGATCAGTCATTCAGTGAAGCTTTGGATACTACTAAAAC
CATCATCTGGAATGGACCTATGGGTGTGTTTGAATTTGATAAATTTGCTG
CTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCAGCGGGAAGGGA
GTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCCGTAGAGAAGGT
TGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGGTGGAGCCAGCT
TAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTGCTCTTGATGAT
GCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTGCCATTTCCAGA
GTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAAAGTTAAACTTT
ATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAAATAAATTCTTT
CTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGATCCCATTTTGG
AACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAAGTTCTTGTTCC
TTTCTGATCACAATGAGCCGTTGATGATTGTTAGATAATGCATGAATCCT
GGCACTACAAAAAAAAAAAAAAAAAAA
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