CX291470

Overview
NameCX291470
Unique NameCX291470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ECOK1 (Phosphoglycerate kinase OS=Escherichia coli O1:K1 / APEC GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ECOHS (Phosphoglycerate kinase OS=Escherichia coli O9:H4 (strain HS) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ECO57 (Phosphoglycerate kinase OS=Escherichia coli O157:H7 GN=pgk PE=3 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ECO24 (Phosphoglycerate kinase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1
Query:    7 AEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            A  Q  +E L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  289 ASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_AZOVD (Phosphoglycerate kinase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 47/93 (50.54%), Postives = 70/93 (75.27%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            F+E L +++TI+WNGP+GVFEFD+F  GT+ +A+ +A        +I GGGD++AA++K G+ +K+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  294 FAELLKSSRTILWNGPVGVFEFDQFGNGTKVLAEAIA---ASPAFSIAGGGDTLAAIDKYGVGEKISYISTGGGAFLEFVEGKVLPAVAVLEE 383          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ARTAT (Phosphoglycerate kinase OS=Arthrobacter aurescens (strain TC1) GN=pgk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 1
Query:   19 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLAD-KMSHISTGGGASLELLEGKTLPGVLALD 297
            +F+  ++  KT+ WNGPMGVFEF+ F++GT AIA+ L +       T++GGGDS AAV  +G  D +  HISTGGGASLE LEGK LPG+  LD
Sbjct:  317 AFAAQIEGAKTVFWNGPMGVFEFEAFSSGTRAIAQALTDTV---AFTVVGGGDSAAAVRTLGFEDSQFGHISTGGGASLEYLEGKELPGLSVLD 407          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_STRPG (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=pgk PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21
Identity = 56/97 (57.73%), Postives = 66/97 (68.04%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGT----EAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            F +AL   KT++WNGPMGVFE   F AGT    +AI K+       GV +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  307 FDQALTGAKTVVWNGPMGVFENPDFQAGTIDVMDAIVKQ------PGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTE 397          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_STRP7 (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain 70585) GN=pgk PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21
Identity = 53/93 (56.99%), Postives = 63/93 (67.74%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            F EAL   KT++WNGPMGVFE   F  GT  +   + +  G  V +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  307 FDEALTGAKTVVWNGPMGVFENPDFQTGTIGVMDAIVKQPG--VKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTE 397          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ERWCT (Phosphoglycerate kinase OS=Erwinia carotovora subsp. atroseptica GN=pgk PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21
Identity = 49/95 (51.58%), Postives = 68/95 (71.58%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +  +E L   KTI+WNGP+GVFEF  F  GTE IA+ +A+       +I GGGD++AA++  G+ADK+S+ISTGGGA LE +EGK LP V+ L++
Sbjct:  292 ERLAEILKNAKTILWNGPVGVFEFPNFRKGTEIIARAIAD---SDAFSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKKLPAVVMLEE 383          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SHESR (Phosphoglycerate kinase OS=Shewanella sp. (strain MR-7) GN=pgk PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.284e-21
Identity = 52/98 (53.06%), Postives = 72/98 (73.47%), Query Frame = 1
Query:    1 DSAEDQSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 294
            DSAE  + ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  294 DSAE--ALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIADSKA---FSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
The following BLAST results are available for this feature:
BLAST of CX291470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_ECOK12.512e-2151.02Phosphoglycerate kinase OS=Escherichia coli O1:K1 ... [more]
PGK_ECOHS2.512e-2151.02Phosphoglycerate kinase OS=Escherichia coli O9:H4 ... [more]
PGK_ECO572.512e-2151.02Phosphoglycerate kinase OS=Escherichia coli O157:H... [more]
PGK_ECO242.512e-2151.02Phosphoglycerate kinase OS=Escherichia coli O139:H... [more]
PGK_AZOVD2.512e-2150.54Phosphoglycerate kinase OS=Azotobacter vinelandii ... [more]
PGK_ARTAT2.512e-2154.26Phosphoglycerate kinase OS=Arthrobacter aurescens ... [more]
PGK_STRPG3.280e-2157.73Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRP73.280e-2156.99Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_ERWCT3.280e-2151.58Phosphoglycerate kinase OS=Erwinia carotovora subs... [more]
PGK_SHESR4.284e-2153.06Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC03009A04SK OF2 Citrus clementina cDNA clone C03009A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291470 ID=CX291470; Name=CX291470; organism=Citrus clementina; type=EST; length=627bp
GATTCGGCCGAGGATCAGTCATTCAGTGAAGCTTTGGATACTACTAAAAC
CATCATCTGGAATGGACCTATGGGTGTGTTTGAATTTGATAAATTTGCTG
CTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCAGCGGGAAGGGA
GTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCCGTAGAGAAGGT
TGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGGTGGAGCCAGCT
TAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTGCTCTTGATGAT
GCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTGCCATTTCCAGA
GTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAAAGTTAAACTTT
ATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAAATAAATTCTTT
CTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGATCCCATTTTGG
AACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAAGTTCTTGTTCC
TTTCTGATCACAATGAGCCGTTGATGATTGTTAGATAATGCATGAATCCT
GGCACTACAAAAAAAAAAAAAAAAAAA
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