CX291470

Overview
NameCX291470
Unique NameCX291470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_XANC5 (Phosphoglycerate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=pgk PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 49/93 (52.69%), Postives = 70/93 (75.27%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 294
            Q ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K  + I GGGD++AAV+K  +A ++++ISTGGGA LE LEGKTLP V AL
Sbjct:  297 QRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAFS-IAGGGDTLAAVDKYDIAQEVTYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_RHOBA (Phosphoglycerate kinase OS=Rhodopirellula baltica GN=pgk PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 50/96 (52.08%), Postives = 70/96 (72.92%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 303
            + ++E + + KTI+WNGPMGVFE      GT+A+A+ +A+  G  V+ IIGGGDS AAV+++G AD +SH+STGGGASL +LEG+    V  LD+A
Sbjct:  305 KKYAEVIKSAKTIVWNGPMGVFEKPPMDEGTKAVAQAIAD--GDAVS-IIGGGDSAAAVDQLGFADDVSHVSTGGGASLAMLEGQAFAAVDLLDEA 397          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ENT38 (Phosphoglycerate kinase OS=Enterobacter sp. (strain 638) GN=pgk PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            Q  ++ L   KTI+WNGP+GVFEF  F  GTE +A  +A+       +I GGGD++AA++  G++DK+S+ISTGGGA LE +EGK LP V  L++
Sbjct:  292 QKLADILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIAD---SDAFSIAGGGDTLAAIDLFGISDKISYISTGGGAFLEFVEGKVLPAVAMLEE 383          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CAMLR (Phosphoglycerate kinase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=pgk PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 294
            F EAL   +TI WNGPMGVFE DKF+ G+  ++  ++E      TT+IGGGD+   V + G AD+M+ ISTGGGASLEL+EGK LPGV  L
Sbjct:  307 FKEALSDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISE---SHATTVIGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVKPL 394          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ANAD2 (Phosphoglycerate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pgk PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 46/93 (49.46%), Postives = 63/93 (67.74%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            + + +   KT+ WNGPMG+FE   ++ GT  +AK +A        T++GGGDS AAVE+ GL D M H+STGGGASLE +EG+ LPGV A ++
Sbjct:  307 YRQRIAAAKTVFWNGPMGLFEQKPWSEGTFGVAKAMA---ASPAVTVVGGGDSAAAVEQAGLVDAMKHVSTGGGASLEFIEGRELPGVKACEE 396          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ACIBY (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain AYE) GN=pgk PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 47/93 (50.54%), Postives = 69/93 (74.19%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 294
            ++F+  L T+KTI+WNGP+GVFE D+F  GT+A++  +A+       +I GGGD++AA++K  +AD++ +ISTGGGA LE +EGKTLP V  L
Sbjct:  302 KAFANILTTSKTILWNGPVGVFEVDQFGEGTKALSLAVAQ---SDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLPAVAVL 391          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ACIBT (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=pgk PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 47/93 (50.54%), Postives = 69/93 (74.19%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 294
            ++F+  L T+KTI+WNGP+GVFE D+F  GT+A++  +A+       +I GGGD++AA++K  +AD++ +ISTGGGA LE +EGKTLP V  L
Sbjct:  302 KAFANILTTSKTILWNGPVGVFEVDQFGEGTKALSLAVAQ---SDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLPAVAVL 391          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ACIBS (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain SDF) GN=pgk PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 47/93 (50.54%), Postives = 69/93 (74.19%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 294
            ++F+  L T+KTI+WNGP+GVFE D+F  GT+A++  +A+       +I GGGD++AA++K  +AD++ +ISTGGGA LE +EGKTLP V  L
Sbjct:  302 KAFANILTTSKTILWNGPVGVFEVDQFGEGTKALSLAVAQ---SDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLPAVAVL 391          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ACIBC (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain ACICU) GN=pgk PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 47/93 (50.54%), Postives = 69/93 (74.19%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 294
            ++F+  L T+KTI+WNGP+GVFE D+F  GT+A++  +A+       +I GGGD++AA++K  +AD++ +ISTGGGA LE +EGKTLP V  L
Sbjct:  302 KAFANILTTSKTILWNGPVGVFEVDQFGEGTKALSLAVAQ---SDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLPAVAVL 391          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ACIB5 (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain AB0057) GN=pgk PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 47/93 (50.54%), Postives = 69/93 (74.19%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 294
            ++F+  L T+KTI+WNGP+GVFE D+F  GT+A++  +A+       +I GGGD++AA++K  +AD++ +ISTGGGA LE +EGKTLP V  L
Sbjct:  302 KAFANILTTSKTILWNGPVGVFEVDQFGEGTKALSLAVAQ---SDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLPAVAVL 391          
The following BLAST results are available for this feature:
BLAST of CX291470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_XANC51.628e-2052.69Phosphoglycerate kinase OS=Xanthomonas campestris ... [more]
PGK_RHOBA1.628e-2052.08Phosphoglycerate kinase OS=Rhodopirellula baltica ... [more]
PGK_ENT381.628e-2049.47Phosphoglycerate kinase OS=Enterobacter sp. (strai... [more]
PGK_CAMLR1.628e-2056.04Phosphoglycerate kinase OS=Campylobacter lari (str... [more]
PGK_ANAD21.628e-2049.46Phosphoglycerate kinase OS=Anaeromyxobacter dehalo... [more]
PGK_ACIBY1.628e-2050.54Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIBT1.628e-2050.54Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIBS1.628e-2050.54Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIBC1.628e-2050.54Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIB51.628e-2050.54Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]

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Properties
Property NameValue
Genbank descriptionC03009A04SK OF2 Citrus clementina cDNA clone C03009A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291470 ID=CX291470; Name=CX291470; organism=Citrus clementina; type=EST; length=627bp
GATTCGGCCGAGGATCAGTCATTCAGTGAAGCTTTGGATACTACTAAAAC
CATCATCTGGAATGGACCTATGGGTGTGTTTGAATTTGATAAATTTGCTG
CTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCAGCGGGAAGGGA
GTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCCGTAGAGAAGGT
TGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGGTGGAGCCAGCT
TAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTGCTCTTGATGAT
GCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTGCCATTTCCAGA
GTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAAAGTTAAACTTT
ATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAAATAAATTCTTT
CTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGATCCCATTTTGG
AACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAAGTTCTTGTTCC
TTTCTGATCACAATGAGCCGTTGATGATTGTTAGATAATGCATGAATCCT
GGCACTACAAAAAAAAAAAAAAAAAAA
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