CX291470

Overview
NameCX291470
Unique NameCX291470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CLOPS (Phosphoglycerate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.053e-27
Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE      TTIIGGGDS AAV  +G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  307 YAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAEADA---TTIIGGGDSAAAVNILGFGDKMSHISTGGGASLEFLEGKVLPGIAALND 396          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CLOPE (Phosphoglycerate kinase OS=Clostridium perfringens GN=pgk PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.053e-27
Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE      TTIIGGGDS AAV  +G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  307 YAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAEADA---TTIIGGGDSAAAVNILGFGDKMSHISTGGGASLEFLEGKVLPGIAALND 396          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CLOP1 (Phosphoglycerate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.053e-27
Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            ++EA+   KT+IWNGPMGVFEF+ F  GT A+AK +AE      TTIIGGGDS AAV  +G  DKMSHISTGGGASLE LEGK LPG+ AL+D
Sbjct:  307 YAEAIKDAKTVIWNGPMGVFEFENFNKGTIAVAKAMAEADA---TTIIGGGDSAAAVNILGFGDKMSHISTGGGASLEFLEGKVLPGIAALND 396          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CLOAB (Phosphoglycerate kinase OS=Clostridium acetobutylicum GN=pgk PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.053e-27
Identity = 57/93 (61.29%), Postives = 74/93 (79.57%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +++A+   KT++WNGPMGVFEF+ FA GT+ +AK +AE      TT+IGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG++AL+D
Sbjct:  307 YADAVKEAKTVVWNGPMGVFEFENFAKGTKDVAKAMAE---SDATTVIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIVALND 396          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGKT_THEMA (Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk/tpi PE=1 SV=4)

HSP 1 Score: 123.25 bits (308), Expect = 1.053e-27
Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            F + L   KT++WNGPMGVFE D FA GT+ +A  +A L+ KG  T++GGGDS AAV K GL DK SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  304 FKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_TREDE (Phosphoglycerate kinase OS=Treponema denticola GN=pgk PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.375e-27
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 297
            + E + ++K+I+WNGP+GVFEF+ F+ GTE  A+ +A  + KG  TI+GGGDSVAAV K  LADKMSH+STGGGASLE LEGK LPG+  LD
Sbjct:  326 YKEIILSSKSIVWNGPVGVFEFEAFSKGTEETARLVAAATEKGALTIVGGGDSVAAVNKFNLADKMSHVSTGGGASLEFLEGKVLPGIACLD 417          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CLONN (Phosphoglycerate kinase OS=Clostridium novyi (strain NT) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.375e-27
Identity = 59/93 (63.44%), Postives = 73/93 (78.49%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +++A+ T KT++WNGPMGVFEF  FA GT A+A+ +AE      TTIIGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG++AL D
Sbjct:  308 YADAVRTAKTVVWNGPMGVFEFANFAKGTIAVAEAMAEADA---TTIIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIVALSD 397          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_BACLD (Phosphoglycerate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.375e-27
Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +++++ +  +K ++WNGPMGVFE D FA GT A+A+ LAE +     ++IGGGDS AAVEK GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  301 KTYADVIKNSKLVVWNGPMGVFEIDAFAKGTRAVAEALAEAND--TYSVIGGGDSAAAVEKFGLADKMSHISTGGGASLEFMEGKELPGVKALND 393          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_ROSCS (Phosphoglycerate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.796e-27
Identity = 61/96 (63.54%), Postives = 76/96 (79.17%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 303
            ++++E +   +T+IWNGPMGVFE   FA GT AIA+ +A   G    TIIGGGDSVAA+E++GLADK+ HISTGGGASLELLEG+ LPGV AL+DA
Sbjct:  303 RAYTEVITGAQTVIWNGPMGVFELAPFAEGTRAIAQAMANCPGM---TIIGGGDSVAAIEQMGLADKIRHISTGGGASLELLEGRILPGVAALNDA 395          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_THEP1 (Phosphoglycerate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.345e-27
Identity = 55/93 (59.14%), Postives = 69/93 (74.19%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            F + L   KT++WNGPMGVFE D FA GT+ +A  +A L+ KG  T++GGGDS AAV K GL D+ SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  304 FKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDRFSHVSTGGGASLEFLEGKELPGIASIAD 396          
The following BLAST results are available for this feature:
BLAST of CX291470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CLOPS1.053e-2765.59Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOPE1.053e-2765.59Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOP11.053e-2765.59Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOAB1.053e-2761.29Phosphoglycerate kinase OS=Clostridium acetobutyli... [more]
PGKT_THEMA1.053e-2760.22Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk... [more]
PGK_TREDE1.375e-2761.96Phosphoglycerate kinase OS=Treponema denticola GN=... [more]
PGK_CLONN1.375e-2763.44Phosphoglycerate kinase OS=Clostridium novyi (stra... [more]
PGK_BACLD1.375e-2762.11Phosphoglycerate kinase OS=Bacillus licheniformis ... [more]
PGK_ROSCS1.796e-2763.54Phosphoglycerate kinase OS=Roseiflexus castenholzi... [more]
PGK_THEP12.345e-2759.14Phosphoglycerate kinase OS=Thermotoga petrophila (... [more]

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Properties
Property NameValue
Genbank descriptionC03009A04SK OF2 Citrus clementina cDNA clone C03009A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291470 ID=CX291470; Name=CX291470; organism=Citrus clementina; type=EST; length=627bp
GATTCGGCCGAGGATCAGTCATTCAGTGAAGCTTTGGATACTACTAAAAC
CATCATCTGGAATGGACCTATGGGTGTGTTTGAATTTGATAAATTTGCTG
CTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCAGCGGGAAGGGA
GTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCCGTAGAGAAGGT
TGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGGTGGAGCCAGCT
TAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTGCTCTTGATGAT
GCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTGCCATTTCCAGA
GTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAAAGTTAAACTTT
ATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAAATAAATTCTTT
CTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGATCCCATTTTGG
AACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAAGTTCTTGTTCC
TTTCTGATCACAATGAGCCGTTGATGATTGTTAGATAATGCATGAATCCT
GGCACTACAAAAAAAAAAAAAAAAAAA
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