CX291470

Overview
NameCX291470
Unique NameCX291470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_MOOTA (Phosphoglycerate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.063e-27
Identity = 58/95 (61.05%), Postives = 77/95 (81.05%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            ++++ AL+  +T++WNGPMGVFE + FA GTEA+A+ +A + G    TI+GGGDSVAAVEK+G+A K+ HISTGGGASLE LEGK LPGV+AL +
Sbjct:  301 RAYAGALEGARTVVWNGPMGVFEMEAFAHGTEAVARAVAAVDGM---TIVGGGDSVAAVEKMGVAGKIGHISTGGGASLEFLEGKALPGVVALTE 392          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_EXIS2 (Phosphoglycerate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.063e-27
Identity = 59/93 (63.44%), Postives = 73/93 (78.49%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            ++EA+  +K ++WNGPMGVFE DK+A GT+ +A+ LA+       +IIGGGDS AA EK GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  304 YAEAIKASKLVVWNGPMGVFELDKYANGTKGVAQALAD---SDAYSIIGGGDSAAAAEKFGLADKMSHISTGGGASLEFMEGKALPGVEALND 393          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CLOD6 (Phosphoglycerate kinase OS=Clostridium difficile (strain 630) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.063e-27
Identity = 56/94 (59.57%), Postives = 75/94 (79.79%), Query Frame = 1
Query:   19 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +F + +  +KT++WNGPMGVFEF+ FA GT ++A+ +AEL+    TT+IGGGDS AAV ++G  DKM+H+STGGGASLE LEGK LPG+ ALD+
Sbjct:  308 NFVKTIKESKTVVWNGPMGVFEFENFANGTLSVARAMAELTD--ATTVIGGGDSAAAVNQLGFGDKMTHVSTGGGASLEFLEGKELPGIAALDN 399          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CHLPB (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain BS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.063e-27
Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = 1
Query:   19 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +FS  +   KT++WNGPMGVFE + FA GT AIA+ LA+ + KG  +I+GGGDS AAV K GLA  ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  304 TFSREILAAKTVVWNGPMGVFEIEPFAKGTIAIAQALADATAKGTISIVGGGDSAAAVMKAGLASGITHISTGGGASLEFLEGKELPGITALND 397          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_BACME (Phosphoglycerate kinase OS=Bacillus megaterium GN=pgk PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.001e-27
Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +++ +  +K +IWNGPMGVFE D FA GT+A+A+ LAE +     ++IGGGDS AAVEK  LADKMSHISTGGGASLE +EGK LPGV+AL+D
Sbjct:  303 YADVIKNSKLVIWNGPMGVFELDAFANGTKAVAEALAEATD--TYSVIGGGDSAAAVEKFNLADKMSHISTGGGASLEFMEGKELPGVVALND 393          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CHLPD (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.225e-27
Identity = 56/95 (58.95%), Postives = 70/95 (73.68%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            + +   +   +T++WNGPMGVFE D FA GT AIAK LAE +  G  TI+GGGDS AA+ K  L+D ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  303 EKYRNEILAARTVLWNGPMGVFEIDNFAEGTFAIAKALAEATSSGAITIVGGGDSAAAIAKAALSDSITHISTGGGASLEFLEGKALPGIEALND 397          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_BREBN (Phosphoglycerate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.225e-27
Identity = 59/95 (62.11%), Postives = 72/95 (75.79%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            + +   +  +KT++WNGPMGVFE D FA GT  +AK +A  SG   TTIIGGGDSVAAVEK G+A++M+HISTGGGASLE +EGK LPGV  L D
Sbjct:  301 EQYHSVIVDSKTVVWNGPMGVFEMDAFAGGTIGVAKAMAACSG---TTIIGGGDSVAAVEKAGVAEQMTHISTGGGASLEFMEGKELPGVAVLAD 392          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_SCHMA (Phosphoglycerate kinase OS=Schistosoma mansoni GN=PGK PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.824e-27
Identity = 57/96 (59.38%), Postives = 70/96 (72.92%), Query Frame = 1
Query:   16 QSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 303
            + FS+ +   KTI+WNGPMGVFE DKFA GT+A   ++ + +  G TTIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV+AL DA
Sbjct:  320 EEFSKVISRAKTIVWNGPMGVFEMDKFATGTKAAMDEVVKATKNGATTIIGGGDTATCCAKWDTEDKVSHVSTGGGASLELLEGKQLPGVVALTDA 415          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CHLT3 (Phosphoglycerate kinase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.824e-27
Identity = 56/94 (59.57%), Postives = 71/94 (75.53%), Query Frame = 1
Query:   22 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 303
            F E +   KT+IWNGPMGVFE +KFA GT A+A+ LA+ + +G  T+IGGGDS AA+   GL D ++H+STGGGASLE LEGK LPG+ AL +A
Sbjct:  304 FREEVVNAKTVIWNGPMGVFEMEKFAKGTMAVAQALADATKQGAITVIGGGDSAAAIAVAGLEDSVTHVSTGGGASLEFLEGKELPGIAALSNA 397          
BLAST of CX291470 vs. ExPASy Swiss-Prot
Match: PGK_CHLCH (Phosphoglycerate kinase OS=Chlorobium chlorochromatii (strain CaD3) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.824e-27
Identity = 54/85 (63.53%), Postives = 70/85 (82.35%), Query Frame = 1
Query:   46 KTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 300
            +T++WNGPMGVFE D FA GT A+A+ LA+ + +G TTI+GGGDS AA+ K GLA +++HISTGGGASLE LEGK LPG+ AL++
Sbjct:  313 RTVLWNGPMGVFELDNFATGTIAVAQALADATAQGATTIVGGGDSAAAIAKAGLASEITHISTGGGASLEFLEGKELPGIAALNN 397          
The following BLAST results are available for this feature:
BLAST of CX291470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_MOOTA3.063e-2761.05Phosphoglycerate kinase OS=Moorella thermoacetica ... [more]
PGK_EXIS23.063e-2763.44Phosphoglycerate kinase OS=Exiguobacterium sibiric... [more]
PGK_CLOD63.063e-2759.57Phosphoglycerate kinase OS=Clostridium difficile (... [more]
PGK_CHLPB3.063e-2761.70Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGK_BACME4.001e-2763.44Phosphoglycerate kinase OS=Bacillus megaterium GN=... [more]
PGK_CHLPD5.225e-2758.95Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]
PGK_BREBN5.225e-2762.11Phosphoglycerate kinase OS=Brevibacillus brevis (s... [more]
PGK_SCHMA6.824e-2759.38Phosphoglycerate kinase OS=Schistosoma mansoni GN=... [more]
PGK_CHLT36.824e-2759.57Phosphoglycerate kinase OS=Chloroherpeton thalassi... [more]
PGK_CHLCH6.824e-2763.53Phosphoglycerate kinase OS=Chlorobium chlorochroma... [more]

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Properties
Property NameValue
Genbank descriptionC03009A04SK OF2 Citrus clementina cDNA clone C03009A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291470 ID=CX291470; Name=CX291470; organism=Citrus clementina; type=EST; length=627bp
GATTCGGCCGAGGATCAGTCATTCAGTGAAGCTTTGGATACTACTAAAAC
CATCATCTGGAATGGACCTATGGGTGTGTTTGAATTTGATAAATTTGCTG
CTGGCACTGAGGCAATTGCCAAGAAGCTTGCGGAGCTCAGCGGGAAGGGA
GTGACCACAATCATTGGAGGAGGTGACTCAGTTGCAGCCGTAGAGAAGGT
TGGTCTGGCTGACAAGATGAGCCATATCTCCACTGGAGGTGGAGCCAGCT
TAGAGCTCCTTGAGGGCAAAACACTCCCTGGTGTGCTTGCTCTTGATGAT
GCTTAAACCCAGTTCCTGGACTTTCCTTTTTTAAATGTGCCATTTCCAGA
GTTGTATGTGTGGCTGGTTGTCAGCCCAGAGTGGATAAAAGTTAAACTTT
ATCATTAGAGTTGGTTTTGTAGATGCTGTAAGAGTAAAAATAAATTCTTT
CTCACAGGCATCAATGGTGATGCATTTTTCTGGATTTGATCCCATTTTGG
AACATTGTGATGGTAAGGCTATAAGTTTCCTGAAGTCAAGTTCTTGTTCC
TTTCTGATCACAATGAGCCGTTGATGATTGTTAGATAATGCATGAATCCT
GGCACTACAAAAAAAAAAAAAAAAAAA
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