CX291473

Overview
NameCX291473
Unique NameCX291473
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length639
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291473 vs. ExPASy Swiss-Prot
Match: ACP_GEOSM (Acyl carrier protein OS=Geobacter sp. (strain M21) GN=acpP PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 2 
Query:  188 VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 364
            VD +QVT +  F  DLG DSLD VE+VMALEEEF++EI D++A +I +   AI+YI +H
Sbjct:   18 VDEAQVTNESSFMDDLGADSLDTVELVMALEEEFEIEISDEDAEKIQSVQDAIDYITDH 76
[Close]
BLAST of CX291473 vs. ExPASy Swiss-Prot
Match: ACP_GEOSF (Acyl carrier protein OS=Geobacter sp. (strain FRC-32) GN=acpP PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 2 
Query:  188 VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 364
            VD +QVT +  F  DLG DSLD VE+VMALEEEF +EI D++A +I +   AI+YI +H
Sbjct:   18 VDEAQVTNEASFMDDLGADSLDTVELVMALEEEFDIEISDEDAEKIQSVQDAIDYITDH 76
[Close]
BLAST of CX291473 vs. ExPASy Swiss-Prot
Match: ACP_GEOMG (Acyl carrier protein OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=acpP PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11
Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 2 
Query:  155 RVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 364
            RV  +V     VD +QVT +  F  DLG DSLD VE+VMALEEEF +EI D++A +I +   AI+YI  H
Sbjct:    7 RVKEIVAEQLGVDEAQVTNEASFMDDLGADSLDTVELVMALEEEFDIEISDEDAEKIQSVQDAIDYITEH 76
[Close]
BLAST of CX291473 vs. ExPASy Swiss-Prot
Match: ACP_GEOBB (Acyl carrier protein OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=acpP PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 2 
Query:  188 VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 364
            VD +QVT +  F  DLG DSLD VE+VMALEEEF++EI D++A +I +   AI+YI +H
Sbjct:   18 VDEAQVTNESSFMDDLGADSLDTVELVMALEEEFEIEISDEDAEKIQSVQDAIDYITDH 76
The following BLAST results are available for this feature:
BLAST of CX291473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
ACP_GEOSM9.231e-1155.93Acyl carrier protein OS=Geobacter sp. (strain M21)... [more]
ACP_GEOSF9.231e-1155.93Acyl carrier protein OS=Geobacter sp. (strain FRC-... [more]
ACP_GEOMG9.231e-1151.43Acyl carrier protein OS=Geobacter metallireducens ... [more]
ACP_GEOBB9.231e-1155.93Acyl carrier protein OS=Geobacter bemidjiensis (st... [more]

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Properties
Property NameValue
Genbank descriptionC03009A12SK OF2 Citrus clementina cDNA clone C03009A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291473 ID=CX291473; Name=CX291473; organism=Citrus clementina; type=EST; length=639bp
GAGGATGGCCTTGAGAAGAGCTGTGCTTGACCACGTTCGAGTACCAGTAC
AAACCCTAGCCTTAACCGGATCCAAACAGCGATGGAGTGTGTTAGGTTCT
CTGCGTTTCATGTCATCCCACGACGATCATTTGACCAAAGAAGAGGTCAT
TGACAGAGTGCTCTCTGTTGTCAAGTGCTTCCCCAAAGTCGATCCCTCCC
AGGTGACTCCTGATGTGCATTTCCAGAAGGATTTGGGCTTGGATAGCTTG
GACAATGTGGAGATTGTAATGGCGCTAGAAGAGGAGTTCAAGCTTGAAAT
CCCTGACAAGGAAGCTGTTAGGATTGATGCGTGTAATCTTGCCATTGAGT
ACATCTACAATCATCCGATGGCTAGTTAATTTGAATAAGGAAGTTTCTCT
TCTTGAATTTATTGTGGGGGCATCAAGAAAAAAAATTATCTGTTCTACCC
TGTTTTTTGTAGGCTTTGCATATGATCTCTGTAAGGTAGATGGAAAATAA
TCCAAATCTGTCTGATAATGAGTAGAATTTGAAGAACCCATGTCTCATGA
CGTCTGTTGTTTTTCTGCTGTAATCCAATTCTGCATTTGGATGCTTGATC
TGGTGACATTTTATCATTGTCCTCCTTTGAGAAAAAAAA
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