CX291485

Overview
NameCX291485
Unique NameCX291485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_SHIDS (Phosphoenolpyruvate carboxylase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ppc PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.149e-16
Identity = 48/126 (38.10%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQ-----DDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L  +   +   I+ R  Y +P+N+LQ E+L R RQ      + + ++  AL++T+ GIAAGMRNTG
Sbjct:  758 PFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKEGQEPDPRVEQALMVTIAGIAAGMRNTG 883
[Close]
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_SHIBS (Phosphoenolpyruvate carboxylase OS=Shigella boydii serotype 4 (strain Sb227) GN=ppc PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.149e-16
Identity = 48/126 (38.10%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQ-----DDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L  +   +   I+ R  Y +P+N+LQ E+L R RQ      + + ++  AL++T+ GIAAGMRNTG
Sbjct:  758 PFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKEGQEPDPRVEQALMVTIAGIAAGMRNTG 883
[Close]
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_SHIB3 (Phosphoenolpyruvate carboxylase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ppc PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.149e-16
Identity = 48/126 (38.10%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQ-----DDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  KAD  +A+ YD+ LV ++   LG ELR       K VL ++    L  +   +   I+ R  Y +P+N+LQ E+L R RQ      + + ++  AL++T+ GIAAGMRNTG
Sbjct:  758 PFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKEGQEPDPRVEQALMVTIAGIAAGMRNTG 883
[Close]
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_SALTY (Phosphoenolpyruvate carboxylase OS=Salmonella typhimurium GN=ppc PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.149e-16
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRD-----ALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L  +   +   I+ R  Y +P+N+LQ E+L R R  ++  K  D     AL++T+ G+AAGMRNTG
Sbjct:  758 PFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHLMADLPWIAESIQLRNVYTDPLNVLQAELLYRSRLTEEQGKSPDPRVEQALMVTIAGVAAGMRNTG 883
[Close]
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_SALTI (Phosphoenolpyruvate carboxylase OS=Salmonella typhi GN=ppc PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.149e-16
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRD-----ALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L  +   +   I+ R  Y +P+N+LQ E+L R R  ++  K  D     AL++T+ G+AAGMRNTG
Sbjct:  758 PFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHLMADLPWIAESIQLRNVYTDPLNVLQAELLYRSRLTEEQGKSPDPRVEQALMVTIAGVAAGMRNTG 883
[Close]
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_SALSV (Phosphoenolpyruvate carboxylase OS=Salmonella schwarzengrund (strain CVM19633) GN=ppc PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.149e-16
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRD-----ALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L  +   +   I+ R  Y +P+N+LQ E+L R R  ++  K  D     AL++T+ G+AAGMRNTG
Sbjct:  758 PFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHLMADLPWIAESIQLRNVYTDPLNVLQAELLYRSRLTEEQGKSPDPRVEQALMVTIAGVAAGMRNTG 883
[Close]
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_SALPK (Phosphoenolpyruvate carboxylase OS=Salmonella paratyphi A (strain AKU_12601) GN=ppc PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.149e-16
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRD-----ALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L  +   +   I+ R  Y +P+N+LQ E+L R R  ++  K  D     AL++T+ G+AAGMRNTG
Sbjct:  758 PFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHLMADLPWIAESIQLRNVYTDPLNVLQAELLYRSRLTEEQGKSPDPRVEQALMVTIAGVAAGMRNTG 883
[Close]
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_SALPC (Phosphoenolpyruvate carboxylase OS=Salmonella paratyphi C (strain RKS4594) GN=ppc PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.149e-16
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRD-----ALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L  +   +   I+ R  Y +P+N+LQ E+L R R  ++  K  D     AL++T+ G+AAGMRNTG
Sbjct:  758 PFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHLMADLPWIAESIQLRNVYTDPLNVLQAELLYRSRLTEEQGKSPDPRVEQALMVTIAGVAAGMRNTG 883
[Close]
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_SALPB (Phosphoenolpyruvate carboxylase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ppc PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.149e-16
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRD-----ALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L  +   +   I+ R  Y +P+N+LQ E+L R R  ++  K  D     AL++T+ G+AAGMRNTG
Sbjct:  758 PFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHLMADLPWIAESIQLRNVYTDPLNVLQAELLYRSRLTEEQGKSPDPRVEQALMVTIAGVAAGMRNTG 883
[Close]
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_SALPA (Phosphoenolpyruvate carboxylase OS=Salmonella paratyphi A GN=ppc PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.149e-16
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRD-----ALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  KAD  +A  YD+ LV+++   LG ELR  L    K VL ++    L  +   +   I+ R  Y +P+N+LQ E+L R R  ++  K  D     AL++T+ G+AAGMRNTG
Sbjct:  758 PFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHLMADLPWIAESIQLRNVYTDPLNVLQAELLYRSRLTEEQGKSPDPRVEQALMVTIAGVAAGMRNTG 883
The following BLAST results are available for this feature:
BLAST of CX291485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
CAPP_SHIDS9.149e-1638.10Phosphoenolpyruvate carboxylase OS=Shigella dysent... [more]
CAPP_SHIBS9.149e-1638.10Phosphoenolpyruvate carboxylase OS=Shigella boydii... [more]
CAPP_SHIB39.149e-1638.10Phosphoenolpyruvate carboxylase OS=Shigella boydii... [more]
CAPP_SALTY9.149e-1638.89Phosphoenolpyruvate carboxylase OS=Salmonella typh... [more]
CAPP_SALTI9.149e-1638.89Phosphoenolpyruvate carboxylase OS=Salmonella typh... [more]
CAPP_SALSV9.149e-1638.89Phosphoenolpyruvate carboxylase OS=Salmonella schw... [more]
CAPP_SALPK9.149e-1638.89Phosphoenolpyruvate carboxylase OS=Salmonella para... [more]
CAPP_SALPC9.149e-1638.89Phosphoenolpyruvate carboxylase OS=Salmonella para... [more]
CAPP_SALPB9.149e-1638.89Phosphoenolpyruvate carboxylase OS=Salmonella para... [more]
CAPP_SALPA9.149e-1638.89Phosphoenolpyruvate carboxylase OS=Salmonella para... [more]

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Properties
Property NameValue
Genbank descriptionC03009E02SK OF2 Citrus clementina cDNA clone C03009E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291485 ID=CX291485; Name=CX291485; organism=Citrus clementina; type=EST; length=627bp
GGCCCTTTTTCCAGTCTACCATAGATCTCATAGAGATGGTTTTAGGGAAG
GCAGACACTCATATAGCCAAGCGCTATGATGAAGTCCTTGTTTCAGAGAG
TAGGCAAGAGCTTGGTGCTGAGCTAAGGAGGGAGCTCTTAACAACTGAGA
AGTACGTACTTGTGGTTAGTGGGCATGAGAAGCTATCTGAGAATAACCGC
AGTTTGAGGAGGCTGATTGAGAGCAGACTCCCATATCTCAATCCTATGAA
TATGTTGCAGGTGGAGATACTGAAGAGATTGAGACAGGATGATGATAACC
ATAAACTCAGAGATGCATTGCTCATCACTGTAAATGGAATAGCTGCTGGT
ATGAGGAACACAGGTTAAGTCAATTCGCTAGCTGGTTTAACACAGGTTAA
GTTTAAGTGGCTTGTATGCATATCGGGAAGACAGGTTTAGTAAAATCTCG
CTTGTCATCTGCTAATGTATGCCGGAAACTACTCCTATTTCTATTTTTGT
AATTTTCTTTTTAGAACTGCGGCTTGATGGTTGAGGTCACAACTAAATGT
ACTTGACATAGGCTGTGTGGAAAAATTTGTGGAAAATTTTCAGTTAGTAG
TATTTTTGTGAAAAAAAAAAAAAAAAA
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