CX291485

Overview
NameCX291485
Unique NameCX291485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_HAEIE (Phosphoenolpyruvate carboxylase OS=Haemophilus influenzae (strain PittEE) GN=ppc PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.667e-17
Identity = 50/123 (40.65%), Postives = 77/123 (62.60%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD--NHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  K+DT ++++YD+ LV +    LG  LR++L    + VL +S   +L  +   +   I  R  Y +P+N+LQVE+L R R++ +  N  +  AL+IT+ GIAAGMRNTG
Sbjct:  757 PFFSTRIGMLEMVFSKSDTWLSQQYDQRLVKKELWYLGENLRKQLEDDIQTVLSLSHQSELMSDLPWIADSIALRNIYTDPLNLLQVELLHRFRENPEQVNPDVEQALMITITGIAAGMRNTG 879          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_HAEI8 (Phosphoenolpyruvate carboxylase OS=Haemophilus influenzae (strain 86-028NP) GN=ppc PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.667e-17
Identity = 50/123 (40.65%), Postives = 77/123 (62.60%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD--NHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  K+DT ++++YD+ LV +    LG  LR++L    + VL +S   +L  +   +   I  R  Y +P+N+LQVE+L R R++ +  N  +  AL+IT+ GIAAGMRNTG
Sbjct:  757 PFFSTRIGMLEMVFSKSDTWLSQQYDQRLVKKELWYLGENLRKQLEDDIQTVLSLSHQSELMSDLPWIADSIALRNIYTDPLNLLQVELLHRFRENPEQVNPDVEQALMITITGIAAGMRNTG 879          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_CHRVO (Phosphoenolpyruvate carboxylase OS=Chromobacterium violaceum GN=ppc PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.667e-17
Identity = 47/122 (38.52%), Postives = 73/122 (59.84%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVS-ESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFFQ  +  +E VL KAD  IA+R+ E++   E    L   +  E   T      ++G  +L E N +LRR +E+RLP+L+ + +LQ ++L RLR + D+     A+ +T+NG +AG+RNTG
Sbjct:  777 PFFQVMLSNMEQVLAKADLGIARRFSELVADRELAARLFGAIEAEWRKTHDAFFAITGQAELLEGNPTLRRSLETRLPFLDALGLLQADLLARLRAEPDDEDTLYAIHLTINGTSAGLRNTG 898          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_AERS4 (Phosphoenolpyruvate carboxylase OS=Aeromonas salmonicida (strain A449) GN=ppc PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.667e-17
Identity = 50/123 (40.65%), Postives = 77/123 (62.60%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD--NHKLRDALLITVNGIAAGMRNTG 365
            PFF++ ++++EMV  KAD  +A+ YD  LV +    LG +LR+EL    + VL +     L ++   ++  I  R PY +P+N+LQVE+L R R   +  + +L  AL++T+ GIAAGMRNTG
Sbjct:  755 PFFRTRLEMLEMVFLKADLWLAEYYDTRLVPQELWNLGKQLRQELADAIQIVLQLRPQGDLLDDQPWIKESINLRNPYTDPLNVLQVELLGRSRSHTETLHPELDQALMVTIAGIAAGMRNTG 877          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP2_ARATH (Phosphoenolpyruvate carboxylase 2 OS=Arabidopsis thaliana GN=PPC2 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.667e-17
Identity = 53/151 (35.10%), Postives = 78/151 (51.66%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLR------------------------------DALLITVNGIAAGMRNTG 365
            PFF+ TIDL+EMV  K D  IA  YD +LVSE  Q  G +LR     T + +L V+GH+ + E +  LR+ ++ R PY+  +N+ Q   LK++R    + K+R                              D +++T+ GIAAGM+NTG
Sbjct:  813 PFFRVTIDLVEMVFAKGDPGIAALYDRLLVSEELQPFGEQLRVNYQETRRLLLQVAGHKDILEGDPYLRQRLQLRDPYITTLNVCQAYTLKQIRDPSFHVKVRPHLSKDYMESSPAAELVKLNPKSEYAPGLEDTVILTMKGIAAGMQNTG 963          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_ROSCS (Phosphoenolpyruvate carboxylase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=ppc PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.178e-17
Identity = 48/124 (38.71%), Postives = 78/124 (62.90%), Query Frame = 3
Query:    6 FFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQE-LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLR---QDDDNHKLRDALLITVNGIAAGMRNTG 365
            FF+  ID  +M+LGKAD HIA RY E+   ++    + A +R E     + +  V+  E+L +N   L+  I+ R PY++PM+ LQ+E+L+RLR      D+  + DA+L++++G+AAG+ NTG
Sbjct:  815 FFRVMIDNAQMILGKADLHIASRYAELAPDQNAAAAIFAAIREEYQRASRMIRQVARIERLLDNAPVLQHSIQRRNPYIDPMSYLQIELLRRLRAAPDGPDHAAIEDAILLSISGLAAGLMNTG 938          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_AERHH (Phosphoenolpyruvate carboxylase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ppc PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.178e-17
Identity = 50/123 (40.65%), Postives = 79/123 (64.23%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD--NHKLRDALLITVNGIAAGMRNTG 365
            PFF++ ++++EMV  KAD  +A+ YD  LV +    LG +LR+EL  + + VL +     L ++   ++  I+ R PY +P+N+LQVE+L R R   +  + +L  AL++T+ GIAAGMRNTG
Sbjct:  755 PFFRTRLEMLEMVFLKADVWLAEYYDTRLVPKELWGLGKQLRQELADSIQVVLELRPQGDLLDDQPWIKESIKLRNPYTDPLNVLQVELLGRSRNHAETLHPELDQALMVTIAGIAAGMRNTG 877          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP1_MAIZE (Phosphoenolpyruvate carboxylase 1 OS=Zea mays GN=PEP1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.178e-17
Identity = 52/151 (34.44%), Postives = 82/151 (54.30%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD--------------DNHK----------------LRDALLITVNGIAAGMRNTG 365
            PFF+ T+DL+EMV  K D  IA  YDE+LV+E  +  G +LR + + T++ +L ++GH+ + E +  L++ +  R PY+  +N+ Q   LKR+R  +              D +K                L D L++T+ GIAAGM+NTG
Sbjct:  820 PFFRVTLDLLEMVFAKGDPGIAGLYDELLVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPFLKQGLVLRNPYITTLNVFQAYTLKRIRDPNFKVTPQPPLSKEFADENKPAGLVKLNPASEYPPGLEDTLILTMKGIAAGMQNTG 970          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_MYCLE (Phosphoenolpyruvate carboxylase OS=Mycobacterium leprae GN=ppc PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.844e-17
Identity = 45/122 (36.89%), Postives = 78/122 (63.93%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSES-RQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF+S +  +  VL K+D  +A RY E++V E+ R+ +  ++  E   T     +++GH+ L  +N +L R + +R PYL P+N LQVE+L+R R   D+  ++  +L+T+NG+A+ +RN+G
Sbjct:  813 PFFRSVLSNMAQVLAKSDLGLAARYAELVVDEALRRRVFDKIADEHRRTIAIHKLITGHDDLLADNPALARSVFNRFPYLEPLNHLQVELLRRYRSGHDDEMVQRGILLTMNGLASALRNSG 934          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_BURXL (Phosphoenolpyruvate carboxylase OS=Burkholderia xenovorans (strain LB400) GN=ppc PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.844e-17
Identity = 50/123 (40.65%), Postives = 75/123 (60.98%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSES--RQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF + +  ++MVL K D  +A RY   LVS+   R+ +   +  E   T K +  ++G  +    N  L R I++R PYL+P+N LQVE+LKR R  D N ++R  + +++NGIAAG+RNTG
Sbjct:  873 PFFANLLSNMDMVLAKTDLAVASRY-AALVSDKKLRKHVFERIVAEWERTSKVLSEITGKSERLAENPLLARSIKNRFPYLDPLNHLQVELLKRHRAGDTNARVRRGIHLSINGIAAGLRNTG 994          
The following BLAST results are available for this feature:
BLAST of CX291485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
CAPP_HAEIE1.667e-1740.65Phosphoenolpyruvate carboxylase OS=Haemophilus inf... [more]
CAPP_HAEI81.667e-1740.65Phosphoenolpyruvate carboxylase OS=Haemophilus inf... [more]
CAPP_CHRVO1.667e-1738.52Phosphoenolpyruvate carboxylase OS=Chromobacterium... [more]
CAPP_AERS41.667e-1740.65Phosphoenolpyruvate carboxylase OS=Aeromonas salmo... [more]
CAPP2_ARATH1.667e-1735.10Phosphoenolpyruvate carboxylase 2 OS=Arabidopsis t... [more]
CAPP_ROSCS2.178e-1738.71Phosphoenolpyruvate carboxylase OS=Roseiflexus cas... [more]
CAPP_AERHH2.178e-1740.65Phosphoenolpyruvate carboxylase OS=Aeromonas hydro... [more]
CAPP1_MAIZE2.178e-1734.44Phosphoenolpyruvate carboxylase 1 OS=Zea mays GN=P... [more]
CAPP_MYCLE2.844e-1736.89Phosphoenolpyruvate carboxylase OS=Mycobacterium l... [more]
CAPP_BURXL2.844e-1740.65Phosphoenolpyruvate carboxylase OS=Burkholderia xe... [more]

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Properties
Property NameValue
Genbank descriptionC03009E02SK OF2 Citrus clementina cDNA clone C03009E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291485 ID=CX291485; Name=CX291485; organism=Citrus clementina; type=EST; length=627bp
GGCCCTTTTTCCAGTCTACCATAGATCTCATAGAGATGGTTTTAGGGAAG
GCAGACACTCATATAGCCAAGCGCTATGATGAAGTCCTTGTTTCAGAGAG
TAGGCAAGAGCTTGGTGCTGAGCTAAGGAGGGAGCTCTTAACAACTGAGA
AGTACGTACTTGTGGTTAGTGGGCATGAGAAGCTATCTGAGAATAACCGC
AGTTTGAGGAGGCTGATTGAGAGCAGACTCCCATATCTCAATCCTATGAA
TATGTTGCAGGTGGAGATACTGAAGAGATTGAGACAGGATGATGATAACC
ATAAACTCAGAGATGCATTGCTCATCACTGTAAATGGAATAGCTGCTGGT
ATGAGGAACACAGGTTAAGTCAATTCGCTAGCTGGTTTAACACAGGTTAA
GTTTAAGTGGCTTGTATGCATATCGGGAAGACAGGTTTAGTAAAATCTCG
CTTGTCATCTGCTAATGTATGCCGGAAACTACTCCTATTTCTATTTTTGT
AATTTTCTTTTTAGAACTGCGGCTTGATGGTTGAGGTCACAACTAAATGT
ACTTGACATAGGCTGTGTGGAAAAATTTGTGGAAAATTTTCAGTTAGTAG
TATTTTTGTGAAAAAAAAAAAAAAAAA
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