CX291485

Overview
NameCX291485
Unique NameCX291485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_BRAJA (Phosphoenolpyruvate carboxylase OS=Bradyrhizobium japonicum GN=ppc PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.844e-17
Identity = 44/122 (36.07%), Postives = 78/122 (63.93%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSES-RQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF+  +  ++MVL K+   IA RY E++  E+ R+++   +RRE  +  + +L + G ++L + N  L R +  R PYL+P+N +QVE+L+  R  + + ++   + +T+NGI+AG+RNTG
Sbjct:  811 PFFRMLLSNMDMVLAKSSIAIASRYAELVPDEALREKIFGRIRREWHSCIETLLDIMGQDRLLQGNPLLERSVRHRFPYLDPLNHVQVELLREHRAQNPDEQVLRGIQLTINGISAGLRNTG 932          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP2_MESCR (Phosphoenolpyruvate carboxylase 2 OS=Mesembryanthemum crystallinum GN=PPC2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.844e-17
Identity = 55/154 (35.71%), Postives = 77/154 (50.00%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLR---------------------------------DALLITVNGIAAGMRNTG 365
            PFF+ TIDL+EMV  K D  IA  YD++LVSE     G  LR +   T+  +L ++GH+ L E +  LR+ +  R  Y+  +N LQ   LKR+R  + N +LR                                 D L++T+ GIAAGM+NTG
Sbjct:  807 PFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELWPFGERLRADFEETKGLILKIAGHKDLLEGDPYLRQRLRLRDSYITTLNALQAYTLKRIRDPNYNVQLRPHISKEYMDSTSNKPAAELVKLNPSSEYAPGLEDTLILTMKGIAAGMQNTG 960          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_YERPY (Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ppc PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  KAD  +A+ YD+ LV +S   LG +LR +L    K VL ++  + L  +   +   I  R  Y +P+N+LQ E+L R RQ +  +  +  AL++T+ G+AAGMRNTG
Sbjct:  757 PFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG 878          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_YERPS (Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis GN=ppc PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  KAD  +A+ YD+ LV +S   LG +LR +L    K VL ++  + L  +   +   I  R  Y +P+N+LQ E+L R RQ +  +  +  AL++T+ G+AAGMRNTG
Sbjct:  757 PFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG 878          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_YERPP (Phosphoenolpyruvate carboxylase OS=Yersinia pestis (strain Pestoides F) GN=ppc PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  KAD  +A+ YD+ LV +S   LG +LR +L    K VL ++  + L  +   +   I  R  Y +P+N+LQ E+L R RQ +  +  +  AL++T+ G+AAGMRNTG
Sbjct:  757 PFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG 878          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_YERPN (Phosphoenolpyruvate carboxylase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ppc PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  KAD  +A+ YD+ LV +S   LG +LR +L    K VL ++  + L  +   +   I  R  Y +P+N+LQ E+L R RQ +  +  +  AL++T+ G+AAGMRNTG
Sbjct:  757 PFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG 878          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_YERPE (Phosphoenolpyruvate carboxylase OS=Yersinia pestis GN=ppc PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  KAD  +A+ YD+ LV +S   LG +LR +L    K VL ++  + L  +   +   I  R  Y +P+N+LQ E+L R RQ +  +  +  AL++T+ G+AAGMRNTG
Sbjct:  757 PFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG 878          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_YERPB (Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ppc PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  KAD  +A+ YD+ LV +S   LG +LR +L    K VL ++  + L  +   +   I  R  Y +P+N+LQ E+L R RQ +  +  +  AL++T+ G+AAGMRNTG
Sbjct:  757 PFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG 878          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_YERPA (Phosphoenolpyruvate carboxylase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ppc PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  KAD  +A+ YD+ LV +S   LG +LR +L    K VL ++  + L  +   +   I  R  Y +P+N+LQ E+L R RQ +  +  +  AL++T+ G+AAGMRNTG
Sbjct:  757 PFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG 878          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_YERP3 (Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ppc PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  KAD  +A+ YD+ LV +S   LG +LR +L    K VL ++  + L  +   +   I  R  Y +P+N+LQ E+L R RQ +  +  +  AL++T+ G+AAGMRNTG
Sbjct:  757 PFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG 878          
The following BLAST results are available for this feature:
BLAST of CX291485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
CAPP_BRAJA2.844e-1736.07Phosphoenolpyruvate carboxylase OS=Bradyrhizobium ... [more]
CAPP2_MESCR2.844e-1735.71Phosphoenolpyruvate carboxylase 2 OS=Mesembryanthe... [more]
CAPP_YERPY3.715e-1740.16Phosphoenolpyruvate carboxylase OS=Yersinia pseudo... [more]
CAPP_YERPS3.715e-1740.16Phosphoenolpyruvate carboxylase OS=Yersinia pseudo... [more]
CAPP_YERPP3.715e-1740.16Phosphoenolpyruvate carboxylase OS=Yersinia pestis... [more]
CAPP_YERPN3.715e-1740.16Phosphoenolpyruvate carboxylase OS=Yersinia pestis... [more]
CAPP_YERPE3.715e-1740.16Phosphoenolpyruvate carboxylase OS=Yersinia pestis... [more]
CAPP_YERPB3.715e-1740.16Phosphoenolpyruvate carboxylase OS=Yersinia pseudo... [more]
CAPP_YERPA3.715e-1740.16Phosphoenolpyruvate carboxylase OS=Yersinia pestis... [more]
CAPP_YERP33.715e-1740.16Phosphoenolpyruvate carboxylase OS=Yersinia pseudo... [more]

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Properties
Property NameValue
Genbank descriptionC03009E02SK OF2 Citrus clementina cDNA clone C03009E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291485 ID=CX291485; Name=CX291485; organism=Citrus clementina; type=EST; length=627bp
GGCCCTTTTTCCAGTCTACCATAGATCTCATAGAGATGGTTTTAGGGAAG
GCAGACACTCATATAGCCAAGCGCTATGATGAAGTCCTTGTTTCAGAGAG
TAGGCAAGAGCTTGGTGCTGAGCTAAGGAGGGAGCTCTTAACAACTGAGA
AGTACGTACTTGTGGTTAGTGGGCATGAGAAGCTATCTGAGAATAACCGC
AGTTTGAGGAGGCTGATTGAGAGCAGACTCCCATATCTCAATCCTATGAA
TATGTTGCAGGTGGAGATACTGAAGAGATTGAGACAGGATGATGATAACC
ATAAACTCAGAGATGCATTGCTCATCACTGTAAATGGAATAGCTGCTGGT
ATGAGGAACACAGGTTAAGTCAATTCGCTAGCTGGTTTAACACAGGTTAA
GTTTAAGTGGCTTGTATGCATATCGGGAAGACAGGTTTAGTAAAATCTCG
CTTGTCATCTGCTAATGTATGCCGGAAACTACTCCTATTTCTATTTTTGT
AATTTTCTTTTTAGAACTGCGGCTTGATGGTTGAGGTCACAACTAAATGT
ACTTGACATAGGCTGTGTGGAAAAATTTGTGGAAAATTTTCAGTTAGTAG
TATTTTTGTGAAAAAAAAAAAAAAAAA
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