CX291485

Overview
NameCX291485
Unique NameCX291485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_VIBVY (Phosphoenolpyruvate carboxylase OS=Vibrio vulnificus (strain YJ016) GN=ppc PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 51/122 (41.80%), Postives = 76/122 (62.30%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  K ++ I++ YDE L  +S   LG  LR +L +  K VL V  +E L +++   +  I  R  Y+ P+NMLQ E+L R RQ    + +L +AL++T+ GIAAGMRNTG
Sbjct:  756 PFFSTRLGMLEMVYLKCNSEISRYYDERLADKSLLPLGDRLRDQLQSDIKAVLNVENNENLMQSDPWGQESIRLRNIYIEPLNMLQAELLYRTRQAGVVSEELEEALMVTIAGIAAGMRNTG 877          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_VIBSL (Phosphoenolpyruvate carboxylase OS=Vibrio splendidus (strain LGP32) GN=ppc PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQ-DDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  K +  IAK YD+ LV E    LG  LR +L    K VL V  +E L +++      I  R  Y+ P+NMLQ E+L R R+ +    +L +AL++T+ GIAAGMRNTG
Sbjct:  755 PFFSTRLGMLEMVYSKCNMEIAKYYDQRLVDEELLPLGELLREQLQKDIKAVLNVENNENLMQSDPWGLESIRLRNIYVEPLNMLQAELLYRTRKCETPPAELEEALMVTIAGIAAGMRNTG 876          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_STRP1 (Phosphoenolpyruvate carboxylase OS=Streptococcus pyogenes serotype M1 GN=ppc PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 42/121 (34.71%), Postives = 75/121 (61.98%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF S +  ++MVL K++ +IA +Y ++   +  +++  E+  E   T+  +L +  H+ L E+N SL+  ++SRLPY N +N +Q+E++KR R +  +      +  T+NGIA G+RN+G
Sbjct:  800 PFFHSLLSNVDMVLSKSNMNIAFQYAQLAERQDVRDVFYEILDEWQLTKNVILAIQDHDDLLEDNPSLKHSLKSRLPYFNVLNYIQIELIKRWRNNQLDENDEKLIHTTINGIATGLRNSG 920          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_YERE8 (Phosphoenolpyruvate carboxylase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ppc PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.851e-17
Identity = 49/123 (39.84%), Postives = 75/123 (60.98%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD--NHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  KAD  +A+ YD+ LV +S   LG +LR +L    K VL ++  + L  +   +   I  R  Y +P+N+LQ E+L R RQ ++  +  +  AL++T+ G+AAGMRNTG
Sbjct:  757 PFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLEADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQENAADACVEQALMVTIAGVAAGMRNTG 879          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_RHOPS (Phosphoenolpyruvate carboxylase OS=Rhodopseudomonas palustris (strain BisB5) GN=ppc PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.851e-17
Identity = 44/122 (36.07%), Postives = 75/122 (61.48%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSES-RQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF+  +  ++MVL K+   IA RY +++  E  R ++   +R E   +   +L + GHE+L + N  L R I  R PYL+P+N +QV++L+  R  D + ++   + +T+NGI+AG+RN+G
Sbjct:  812 PFFRMLLSNMDMVLSKSSIAIASRYADLVPDEELRHKIFGRIRIEWHASVDSLLAIMGHERLLQGNPLLERSIRHRFPYLDPLNHVQVQLLREHRTHDPDEQVLRGIQLTINGISAGLRNSG 933          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_PSYIN (Phosphoenolpyruvate carboxylase OS=Psychromonas ingrahamii (strain 37) GN=ppc PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.851e-17
Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDN--HKLRDALLITVNGIAAGMRNTG 365
            PFF + +++ EMV  KAD  + K Y+E LV +    LG  LR  L  T + VL      +L +    ++  I  R PY++P+NMLQ E+L R R++ D     +  AL++T+ GIAAG+RNTG
Sbjct:  756 PFFHTRLEMFEMVFLKADEELTKFYEERLVPKELWPLGQRLRDNLTLTRETVLETIPDHQLMQEQPWIKESISLRNPYVDPLNMLQAELLYRSRENGDEICPVVDQALMVTIAGIAAGLRNTG 878          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_PECCP (Phosphoenolpyruvate carboxylase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ppc PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.851e-17
Identity = 50/122 (40.98%), Postives = 72/122 (59.02%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITVNGIAAGMRNTG 365
            PFF + I ++EMV  KAD  +A+ YD+ LV E    LG +LR +L      VL +S  + L  +   +   I  R  Y +P+N+LQ E+L R RQ +  +  L  AL++T+ G+AAGMRNTG
Sbjct:  758 PFFSTRIGMLEMVFAKADLWLAEYYDQRLVDEKLWPLGKQLRDQLAADINIVLAISNDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEKPDADLELALMVTIAGVAAGMRNTG 879          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_ALISL (Phosphoenolpyruvate carboxylase OS=Aliivibrio salmonicida (strain LFI1238) GN=ppc PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.851e-17
Identity = 49/122 (40.16%), Postives = 75/122 (61.48%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD-NHKLRDALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  K +  +++ YD+ L  +S   LG  LR +L    K VL V   + L E++      I  R  Y++P+NMLQ E+L R RQ ++ + +L +AL++T+ GIAAGMRNTG
Sbjct:  755 PFFSTRLGMLEMVYTKCNPQMSEYYDQRLTDKSLWPLGVRLRNQLQADIKAVLNVENSDHLMESDPWGSESIRLRNIYVDPLNMLQAELLYRTRQQEETSPELEEALMVTIAGIAAGMRNTG 876          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_VIBVU (Phosphoenolpyruvate carboxylase OS=Vibrio vulnificus GN=ppc PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.336e-17
Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD-DNHKLRDALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  K ++ I++ YDE L  +S   LG  LR +L +  K VL V  +E L +++   +  I  R  Y+ P+NMLQ E+L R RQ    +  L +AL++T+ GIAAGMRNTG
Sbjct:  756 PFFSTRLGMLEMVYLKCNSEISRYYDERLADKSLLPLGDRLRDQLQSDIKAVLNVENNENLMQSDPWGQESIRLRNIYIEPLNMLQAELLYRTRQAGVVSEALEEALMVTIAGIAAGMRNTG 877          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_VIBF1 (Phosphoenolpyruvate carboxylase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ppc PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.336e-17
Identity = 49/122 (40.16%), Postives = 75/122 (61.48%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD-NHKLRDALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  K +  +++ YD+ L  +S   LG  LR +L    K VL V  ++ L E +      I  R  Y++P+NMLQ E+L R RQ ++ + +L +AL++T+ GIAAGMRNTG
Sbjct:  755 PFFSTRLGMLEMVYTKCNPQMSEYYDQRLTDKSLWPLGERLRNQLQADIKAVLNVENNDHLMERDPWGSESIRLRNIYVDPLNMLQAELLFRTRQQEETSPELEEALMVTIAGIAAGMRNTG 876          
The following BLAST results are available for this feature:
BLAST of CX291485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
CAPP_VIBVY3.715e-1741.80Phosphoenolpyruvate carboxylase OS=Vibrio vulnific... [more]
CAPP_VIBSL3.715e-1742.62Phosphoenolpyruvate carboxylase OS=Vibrio splendid... [more]
CAPP_STRP13.715e-1734.71Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]
CAPP_YERE84.851e-1739.84Phosphoenolpyruvate carboxylase OS=Yersinia entero... [more]
CAPP_RHOPS4.851e-1736.07Phosphoenolpyruvate carboxylase OS=Rhodopseudomona... [more]
CAPP_PSYIN4.851e-1739.84Phosphoenolpyruvate carboxylase OS=Psychromonas in... [more]
CAPP_PECCP4.851e-1740.98Phosphoenolpyruvate carboxylase OS=Pectobacterium ... [more]
CAPP_ALISL4.851e-1740.16Phosphoenolpyruvate carboxylase OS=Aliivibrio salm... [more]
CAPP_VIBVU6.336e-1741.80Phosphoenolpyruvate carboxylase OS=Vibrio vulnific... [more]
CAPP_VIBF16.336e-1740.16Phosphoenolpyruvate carboxylase OS=Vibrio fischeri... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03009E02SK OF2 Citrus clementina cDNA clone C03009E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291485 ID=CX291485; Name=CX291485; organism=Citrus clementina; type=EST; length=627bp
GGCCCTTTTTCCAGTCTACCATAGATCTCATAGAGATGGTTTTAGGGAAG
GCAGACACTCATATAGCCAAGCGCTATGATGAAGTCCTTGTTTCAGAGAG
TAGGCAAGAGCTTGGTGCTGAGCTAAGGAGGGAGCTCTTAACAACTGAGA
AGTACGTACTTGTGGTTAGTGGGCATGAGAAGCTATCTGAGAATAACCGC
AGTTTGAGGAGGCTGATTGAGAGCAGACTCCCATATCTCAATCCTATGAA
TATGTTGCAGGTGGAGATACTGAAGAGATTGAGACAGGATGATGATAACC
ATAAACTCAGAGATGCATTGCTCATCACTGTAAATGGAATAGCTGCTGGT
ATGAGGAACACAGGTTAAGTCAATTCGCTAGCTGGTTTAACACAGGTTAA
GTTTAAGTGGCTTGTATGCATATCGGGAAGACAGGTTTAGTAAAATCTCG
CTTGTCATCTGCTAATGTATGCCGGAAACTACTCCTATTTCTATTTTTGT
AATTTTCTTTTTAGAACTGCGGCTTGATGGTTGAGGTCACAACTAAATGT
ACTTGACATAGGCTGTGTGGAAAAATTTGTGGAAAATTTTCAGTTAGTAG
TATTTTTGTGAAAAAAAAAAAAAAAAA
back to top