CX291485

Overview
NameCX291485
Unique NameCX291485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_BURMA (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei GN=ppc PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.275e-17
Identity = 49/126 (38.89%), Postives = 76/126 (60.32%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQE-----LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF + +  ++MVL K D  +A RY +++  +  ++     + AE  R   T +    +   H +L+ N   L R I++R PYL+P+N LQVE++KR R  D N +LR  + +T+NGIAAG+RNTG
Sbjct:  873 PFFANLLSNMDMVLAKTDLAVASRYAQLVADKKLRKHVFERIVAEWHR---TADALAEITGAHARLAANPL-LARSIKNRFPYLDPLNHLQVELIKRHRAGDTNARLRRGIHLTINGIAAGLRNTG 994          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_BURM9 (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei (strain NCTC 10229) GN=ppc PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.275e-17
Identity = 49/126 (38.89%), Postives = 76/126 (60.32%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQE-----LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF + +  ++MVL K D  +A RY +++  +  ++     + AE  R   T +    +   H +L+ N   L R I++R PYL+P+N LQVE++KR R  D N +LR  + +T+NGIAAG+RNTG
Sbjct:  873 PFFANLLSNMDMVLAKTDLAVASRYAQLVADKKLRKHVFERIVAEWHR---TADALAEITGAHARLAANPL-LARSIKNRFPYLDPLNHLQVELIKRHRAGDTNARLRRGIHLTINGIAAGLRNTG 994          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_BURM7 (Phosphoenolpyruvate carboxylase OS=Burkholderia mallei (strain NCTC 10247) GN=ppc PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.275e-17
Identity = 49/126 (38.89%), Postives = 76/126 (60.32%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQE-----LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF + +  ++MVL K D  +A RY +++  +  ++     + AE  R   T +    +   H +L+ N   L R I++R PYL+P+N LQVE++KR R  D N +LR  + +T+NGIAAG+RNTG
Sbjct:  873 PFFANLLSNMDMVLAKTDLAVASRYAQLVADKKLRKHVFERIVAEWHR---TADALAEITGAHARLAANPL-LARSIKNRFPYLDPLNHLQVELIKRHRAGDTNARLRRGIHLTINGIAAGLRNTG 994          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP2_MAIZE (Phosphoenolpyruvate carboxylase 2 OS=Zea mays GN=PEP4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.275e-17
Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDD--------------DNHK-----------------LRDALLITVNGIAAGMRNTG 365
            PFF+ TIDL+EMV  K +  IA  YD++LVSE    LG +LR     T+K +L V+GH  L E +  L++ +  R  Y+  +N+ Q   LKR+R  D              D+ K                 L D L++T+ GIAAG++NTG
Sbjct:  816 PFFRVTIDLVEMVFAKGNPGIAALYDKLLVSEELHPLGEKLRANYEETQKLLLQVAGHRDLLEGDLYLKQRLRLRDAYITTLNVCQAYTLKRIRDPDYHVALRPHLSKEIMDSTKAAADVVKLNPGSEYAPGLEDTLILTMKGIAAGLQNTG 967          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_PHOPR (Phosphoenolpyruvate carboxylase OS=Photobacterium profundum GN=ppc PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.081e-16
Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDD-NHKLRDALLITVNGIAAGMRNTG 365
            PFF + + ++EMV  K +  IA+ YD+ L  +S   LG +LR +L    K VL V  +  L E N      I  R  Y+ P+NMLQ E+L R RQ D+ +  L +AL++++ GIA GMRNTG
Sbjct:  755 PFFSTRLGMLEMVYTKTNVGIAEYYDQRLTDKSLWPLGQKLRDQLQQDIKAVLNVENNAHLMEQNPWGAEAIRLRNIYVEPLNMLQAELLYRTRQQDEPSPILEEALMVSIAGIATGMRNTG 876          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP1_SOYBN (Phosphoenolpyruvate carboxylase, housekeeping isozyme OS=Glycine max GN=PPC16 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.081e-16
Identity = 54/152 (35.53%), Postives = 76/152 (50.00%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLR-------------------------------DALLITVNGIAAGMRNTG 365
            PFF+ TIDL+EMV  K D  IA  YD +LVSE     G +LR     T++ +L V+GH  L E +  L++ +  R  Y+  +N+ Q   LKR+R  + N KLR                               D L++T+ GIAAG++NTG
Sbjct:  816 PFFRVTIDLVEMVFAKGDPGIAALYDRLLVSEDLWSFGEQLRTMYEETKELLLQVAGHRDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPNYNVKLRPHISKESIEISKPADELITLNPTSEYAPGLEDTLILTMKGIAAGLQNTG 967          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_STRA5 (Phosphoenolpyruvate carboxylase OS=Streptococcus agalactiae serotype V GN=ppc PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.412e-16
Identity = 42/121 (34.71%), Postives = 73/121 (60.33%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF S +  ++MVL K++ +IA +Y ++  S+  +++   +  E   T+  +L +  H+ L E N  L   ++ RLPY N +N +Q+E++KRLR +  +      + IT+NGIA G+RN+G
Sbjct:  811 PFFNSLLSNVDMVLSKSNMNIALQYAQLAGSKEVRDVFNIILNEWQLTKDMILAIEQHDNLLEENPMLHASLDYRLPYFNVLNYVQIELIKRLRSNQLDEDYEKLIHITINGIATGLRNSG 931          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_STRA3 (Phosphoenolpyruvate carboxylase OS=Streptococcus agalactiae serotype III GN=ppc PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.412e-16
Identity = 42/121 (34.71%), Postives = 73/121 (60.33%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF S +  ++MVL K++ +IA +Y ++  S+  +++   +  E   T+  +L +  H+ L E N  L   ++ RLPY N +N +Q+E++KRLR +  +      + IT+NGIA G+RN+G
Sbjct:  811 PFFNSLLSNVDMVLSKSNMNIALQYAQLAGSKEVRDVFNIILNEWQLTKDMILAIEQHDNLLEENPMLHASLDYRLPYFNVLNYVQIELIKRLRSNQLDEDYEKLIHITINGIATGLRNSG 931          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_STRA1 (Phosphoenolpyruvate carboxylase OS=Streptococcus agalactiae serotype Ia GN=ppc PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.412e-16
Identity = 42/121 (34.71%), Postives = 73/121 (60.33%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFF S +  ++MVL K++ +IA +Y ++  S+  +++   +  E   T+  +L +  H+ L E N  L   ++ RLPY N +N +Q+E++KRLR +  +      + IT+NGIA G+RN+G
Sbjct:  811 PFFNSLLSNVDMVLSKSNMNIALQYAQLAGSKEVRDVFNIILNEWQLTKDMILAIEQHDNLLEENPMLHASLDYRLPYFNVLNYVQIELIKRLRSNQLDEDYEKLIHITINGIATGLRNSG 931          
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_STRR6 (Phosphoenolpyruvate carboxylase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ppc PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.844e-16
Identity = 41/121 (33.88%), Postives = 74/121 (61.16%), Query Frame = 3
Query:    3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365
            PFFQS +  ++MVL K++ +IA  Y ++   E  + +   +  E   T+  +L + GH++L  +N  L+  ++ R+PY N +N +Q+E++KR R+ + +      + IT+NGIA G+RN+G
Sbjct:  778 PFFQSLLSNVDMVLSKSNMNIAFEYAKLCEDEQVKAIYETILNEWQVTKNVILAIEGHDELLADNPYLKASLDYRMPYFNILNYIQLELIKRQRRGELSSDQERLIHITINGIATGLRNSG 898          
The following BLAST results are available for this feature:
BLAST of CX291485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
CAPP_BURMA8.275e-1738.89Phosphoenolpyruvate carboxylase OS=Burkholderia ma... [more]
CAPP_BURM98.275e-1738.89Phosphoenolpyruvate carboxylase OS=Burkholderia ma... [more]
CAPP_BURM78.275e-1738.89Phosphoenolpyruvate carboxylase OS=Burkholderia ma... [more]
CAPP2_MAIZE8.275e-1736.18Phosphoenolpyruvate carboxylase 2 OS=Zea mays GN=P... [more]
CAPP_PHOPR1.081e-1641.80Phosphoenolpyruvate carboxylase OS=Photobacterium ... [more]
CAPP1_SOYBN1.081e-1635.53Phosphoenolpyruvate carboxylase, housekeeping isoz... [more]
CAPP_STRA51.412e-1634.71Phosphoenolpyruvate carboxylase OS=Streptococcus a... [more]
CAPP_STRA31.412e-1634.71Phosphoenolpyruvate carboxylase OS=Streptococcus a... [more]
CAPP_STRA11.412e-1634.71Phosphoenolpyruvate carboxylase OS=Streptococcus a... [more]
CAPP_STRR61.844e-1633.88Phosphoenolpyruvate carboxylase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionC03009E02SK OF2 Citrus clementina cDNA clone C03009E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291485 ID=CX291485; Name=CX291485; organism=Citrus clementina; type=EST; length=627bp
GGCCCTTTTTCCAGTCTACCATAGATCTCATAGAGATGGTTTTAGGGAAG
GCAGACACTCATATAGCCAAGCGCTATGATGAAGTCCTTGTTTCAGAGAG
TAGGCAAGAGCTTGGTGCTGAGCTAAGGAGGGAGCTCTTAACAACTGAGA
AGTACGTACTTGTGGTTAGTGGGCATGAGAAGCTATCTGAGAATAACCGC
AGTTTGAGGAGGCTGATTGAGAGCAGACTCCCATATCTCAATCCTATGAA
TATGTTGCAGGTGGAGATACTGAAGAGATTGAGACAGGATGATGATAACC
ATAAACTCAGAGATGCATTGCTCATCACTGTAAATGGAATAGCTGCTGGT
ATGAGGAACACAGGTTAAGTCAATTCGCTAGCTGGTTTAACACAGGTTAA
GTTTAAGTGGCTTGTATGCATATCGGGAAGACAGGTTTAGTAAAATCTCG
CTTGTCATCTGCTAATGTATGCCGGAAACTACTCCTATTTCTATTTTTGT
AATTTTCTTTTTAGAACTGCGGCTTGATGGTTGAGGTCACAACTAAATGT
ACTTGACATAGGCTGTGTGGAAAAATTTGTGGAAAATTTTCAGTTAGTAG
TATTTTTGTGAAAAAAAAAAAAAAAAA
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