CX291486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR2_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.288e-13 Identity = 51/151 (33.77%), Postives = 83/151 (54.97%), Query Frame = 2 Query: 218 LQDVVITGENGTIDGQGAIWW--NMWRQRTLPFTRPN--LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 658 + ++VITG+ G +DGQG W N ++ PN +++F+N+ + S V NS F++++ C N++I+ VT+ AP DSPNTDGI SS + I ++ I GDD +++ G + I +G+T P GI++GS Sbjct: 127 VDNLVITGK-GNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEV--SGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNI------TGVT------CGPGHGISIGS 262
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13 Identity = 54/143 (37.76%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 248 GTIDGQGAIWWN---MW---RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 658 G IDGQG WW W R+ RP I+F S +II + NSP +++ C V I ++I AP DSPNTDGID +S N ++ + I TGDD VA+ +G SS I I + P GI++GS Sbjct: 154 GVIDGQGKQWWAGQCKWVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTG-----------SSNIVIEDLI-CGPGHGISIGS 284
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: QRT2_ARATH (Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.197e-13 Identity = 45/127 (35.43%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 248 GTIDGQGAIWW--NMWRQRTLP-FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY---GIAYGHPSSGITI 610 G IDG G IWW + LP P + F+ ++ +SN+ +N+ ++ C NV + + +PADSPNTDGI + N+ I+DS + TGDD +++ SG + GI G P GI+I Sbjct: 167 GRIDGNGHIWWPKSCKINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCG-PGHGISI 292
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13 Identity = 50/151 (33.11%), Postives = 83/151 (54.97%), Query Frame = 2 Query: 218 LQDVVITGENGTIDGQGAIWW--NMWRQRTLPFTRPN--LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 658 + ++VITG+ G +DGQG W N ++ PN +++F+N+ + S V NS F++++ C +++I+ VT+ AP DSPNTDGI SS + I ++ I GDD +++ G + I +G+T P GI++GS Sbjct: 127 VDNLVITGK-GNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEV--SGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNI------TGVT------CGPGHGISIGS 262
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12 Identity = 52/152 (34.21%), Postives = 81/152 (53.29%), Query Frame = 2 Query: 218 LQDVVITGENGTIDGQGAIWWNMWR-----QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 658 + ++V+TG GT G+G W Q LP P ++F N +++ I+ + N+ +++ V NV I+ + + APA+SPNTDGI ++ NV I DS I+TGDD V+V G S+ +T+ RV P G++VGS Sbjct: 135 VDNLVLTG-TGTFHGKGEAVWKADGCGKKVQCNLP---PTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSV-----------GRGSNNVTVERVI-CGPGHGLSVGS 270
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.429e-12 Identity = 46/152 (30.26%), Postives = 76/152 (50.00%), Query Frame = 2 Query: 212 DGLQDVVITGENGTIDGQGAIWW--NMWRQRTLPFT-RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 658 D +Q++ + G GTI+G G IWW + + LP P + F S+ +I+ N+ +N+ ++ C NV + + AP +SPNTDGI + N+ I I TGDD +++ +G S + + +T P GI++GS Sbjct: 174 DSVQNLRVEG-GGTINGNGKIWWQNSCKTNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNG-----------SRKVRVNDIT-CGPGHGISIGS 312
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR4_ARATH (Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.143e-12 Identity = 44/133 (33.08%), Postives = 70/133 (52.63%), Query Frame = 2 Query: 248 GTIDGQGAIWWNM---------WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW---DEYGIAYGHPSSGITI 610 GT++G G WW++ + P P +I F S +I + + QNSP +++ C V+I + I +P SPNTDGI ++ +V I +S +S GDD +++ +G D G+ G PS GI+I Sbjct: 178 GTVEGNGQKWWDLPCKPHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCG-PSHGISI 309
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.411e-12 Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 2 Query: 218 LQDVVITGENGTIDGQGAIWWNM------WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 658 + ++VITG+ G +DGQG W+ + + LP + +++F+N+ + S + NS F++++ C +++I+ V + AP DSPNTDGI SS V I ++ I GDD +++ G + I +G+T P GI++GS Sbjct: 127 VDNLVITGK-GKLDGQGPAVWSKNSCVKKYDCKILPNSL--VMDFVNNGEV--SGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNI------TGVT------CGPGHGISIGS 262
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.685e-11 Identity = 41/130 (31.54%), Postives = 68/130 (52.31%), Query Frame = 2 Query: 239 GENGTIDGQGAIWW--NMWRQRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDE---YGIAYGHPSSGITI 610 G G I+G G WW + ++ P T+ P + N +++ + N+ +N+ I C+ V + V I AP DSPNTDGI ++ N+ + +S I TGDD ++++ G + + G P GI+I Sbjct: 163 GSTGIINGNGKTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCG-PGHGISI 291
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR_PERAE (Polygalacturonase OS=Persea americana PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 42/156 (26.92%), Postives = 81/156 (51.92%), Query Frame = 2 Query: 200 FIHGDGLQDVVITGENGTIDGQGAIWWNMW--RQRTLPF-TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 658 +I + + ++ + G GT +G G WW+ R+++LP + P + F + +++I+S++ ++S ++ C +V+ + + AP SPNTDGI + + + +S I TGDD ++++SG S + I P GI++GS Sbjct: 165 WIEFEDISNLTLEG-GGTSNGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESG------------SKMVIATNITCGPGHGISIGS 307 The following BLAST results are available for this feature:
BLAST of CX291486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291486 ID=CX291486; Name=CX291486; organism=Citrus clementina; type=EST; length=673bpback to top |