CX291493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291493 vs. ExPASy Swiss-Prot
Match: NDK_PSEPW (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain W619) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.182e-25 Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 69 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 461 +++TF +IKPD V + ++G+I RFE+ G + K+ + + AE Y + S + FFG L+ ++TSGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EIA +F Sbjct: 3 VQRTFSIIKPDAVAKNVIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSERGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CX291493 vs. ExPASy Swiss-Prot
Match: NDK_PSEPK (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain KT2440) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.182e-25 Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 69 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 461 +++TF +IKPD V + ++G+I RFE+ G + K+ + + AE Y + S + FFG L+ ++TSGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EIA +F Sbjct: 3 VQRTFSIIKPDAVAKNVIGKITTRFEEAGLKIVASKMKQLSKAEAEGFYAEHSERGFFGDLVAFMTSGPVVVQVLEGENAIAKNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CX291493 vs. ExPASy Swiss-Prot
Match: NDK_PSEP1 (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.182e-25 Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 69 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 461 +++TF +IKPD V + ++G+I RFE+ G + K+ + + AE Y + S + FFG L+ ++TSGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EIA +F Sbjct: 3 VQRTFSIIKPDAVAKNVIGKITTRFEEAGLKIVASKMKQLSKAEAEGFYAEHSERGFFGDLVAFMTSGPVVVQVLEGENAIAKNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CX291493 vs. ExPASy Swiss-Prot
Match: NDK_PSEF5 (Nucleoside diphosphate kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.182e-25 Identity = 55/131 (41.98%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 69 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 461 +++TF +IKPD V + ++G+I+ RFE+ G + K+ + + AE Y + S + FFG L+ ++TSGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EIA +F Sbjct: 3 VQRTFSIIKPDAVAKNVIGKIVSRFEEAGLRVVASKMKQLSKAEAEGFYAEHSERGFFGELVAFMTSGPVVVQVLEGENAIVRNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133
BLAST of CX291493 vs. ExPASy Swiss-Prot
Match: NDK_PSE14 (Nucleoside diphosphate kinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.182e-25 Identity = 56/131 (42.75%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 69 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 461 +++TF +IKPD V + ++GEI RFEK G + KL + + AE Y + S++ FFG L+ ++ SGPVV + EGE + R ++GATNP ++A GTIR D A N +HGSDS +A +EI+ +F Sbjct: 3 VQRTFSIIKPDAVAKNVIGEITTRFEKAGLRVVASKLKQLSKAEAEGFYAEHSARGFFGDLVAFMISGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFADSIDANAVHGSDSEAAAAREISYFF 133
BLAST of CX291493 vs. ExPASy Swiss-Prot
Match: NDK_AGRRK (Nucleoside diphosphate kinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.182e-25 Identity = 61/136 (44.85%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 69 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 476 +E+TF MIKPD +R L G I FE G + K + + + AE Y +PFFG L++ +TSGP V + EGEG + R I+GATNPA +A GTIR A+ G N +HGSD+ E+A EIA WF + I Sbjct: 3 IERTFSMIKPDATKRNLTGAITKIFEDNGLRVIASKRVWMSKREAEGFYAVHKERPFFGELVDGMTSGPTVVQVLEGEGAILKNREIMGATNPANAAEGTIRKIHALSIGENSVHGSDAPETAAVEIAYWFSETEI 138
BLAST of CX291493 vs. ExPASy Swiss-Prot
Match: NDK_ACISJ (Nucleoside diphosphate kinase OS=Acidovorax sp. (strain JS42) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.182e-25 Identity = 54/132 (40.91%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 69 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 464 +E+T +IKPD V + ++G+I RFE G + +++ + R AE+ Y +PFF L++++ SGPV+ EGE V R ++GAT+P ++APGTIR D A N +HGSD+ E+AQ E+A +FP Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYARFEAAGLKIAAARMIHLSRAEAEQFYAVHKERPFFKDLVDFMISGPVMVQALEGENAVLKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVAFFFP 134
BLAST of CX291493 vs. ExPASy Swiss-Prot
Match: NDK_SINMW (Nucleoside diphosphate kinase OS=Sinorhizobium medicae (strain WSM419) GN=ndk PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.850e-25 Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 3 Query: 69 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 461 +E+TF MIKPD +R L G I E G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA +A GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 3 IERTFSMIKPDATKRNLTGAITKMLEDAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANAAEGTIRKVHALSIGENSVHGSDAPETAAEEIAYWF 133
BLAST of CX291493 vs. ExPASy Swiss-Prot
Match: NDK_RHORT (Nucleoside diphosphate kinase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=ndk PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.850e-25 Identity = 61/131 (46.56%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 69 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 461 +E+T +IKPD +R L G I RFE+ G + G K + + AE YE + FFGSL+E++TSGPVV + EGE V R ++GATNPA +A TIR D A N +HGSDS E+A EIA +F Sbjct: 3 IERTLSIIKPDATRRNLTGAINARFEEAGLRIVGQKRLRLTTAQAEGFYEVHKERSFFGSLVEFMTSGPVVVQVLEGENAVLKNREVMGATNPANAAEHTIRKDFAESIEANSVHGSDSAENAAHEIAYFF 133
BLAST of CX291493 vs. ExPASy Swiss-Prot
Match: NDK_RHIME (Nucleoside diphosphate kinase OS=Rhizobium meliloti GN=ndk PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.850e-25 Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 3 Query: 69 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 461 +E+TF MIKPD +R L G I E G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA +A GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 3 IERTFSMIKPDATKRNLTGAITKMLEDAGLRVVASKRVWMSRREAEGFYAVHKERPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANAAEGTIRKVHALSIGENSVHGSDAPETAAEEIAYWF 133 The following BLAST results are available for this feature:
BLAST of CX291493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291493 ID=CX291493; Name=CX291493; organism=Citrus clementina; type=EST; length=725bpback to top |