CX291498

Overview
NameCX291498
Unique NameCX291498
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291498 vs. ExPASy Swiss-Prot
Match: KPYM_RABIT (Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuniculus GN=PKM2 PE=1 SV=4)

HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12
Identity = 51/186 (27.42%), Postives = 92/186 (49.46%), Query Frame = 1
Query:  184 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKDTATLAGSLFTLHASQIRIELPTL 708
            T I+ T+GP SRSV+ +   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V  G  +++   L +        L+V + KG D      +     GS   ++     ++LP +
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLIS--------LQVKQ-KGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAV 221          
BLAST of CX291498 vs. ExPASy Swiss-Prot
Match: KPYK_XENLA (Pyruvate kinase muscle isozyme OS=Xenopus laevis GN=pkm PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12
Identity = 44/138 (31.88%), Postives = 75/138 (54.35%), Query Frame = 1
Query:  184 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK------KLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 564
            T I+ T+GP SRSV+++   +K+GM++AR +FS G  EYH  T++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    +     VL +++  L K VK G  I++   L +
Sbjct:   41 TGIICTIGPASRSVEMLKEMIKSGMNIARLNFSHGTHEYHAGTIKNVREATESLASNPIHYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATMRITLDDAFQENCDENVLWVDYKNLTKVVKPGSKIYVDDGLIS 178          
BLAST of CX291498 vs. ExPASy Swiss-Prot
Match: KPYK_YARLI (Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=3 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 41/126 (32.54%), Postives = 74/126 (58.73%), Query Frame = 1
Query:  184 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK-KLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVL---TPDCGQEATSQVLPINFDGLAKSVKKGDTIFI 546
            + I+GT+GP + S ++IS   +AG+++ R +FS G+ EYHQ  +EN + + +  + +  A+ LDT GPE++  V K +K   +KA G V+L    P    +   +++ I++  + K +  G  IF+
Sbjct:   32 SSIIGTIGPNTNSAEMISKLRQAGLNIVRMNFSHGSYEYHQSVIENARESEQQFQGRPLAIALDTKGPEIRTGVTKDDKDWDVKA-GHVMLFSTNPKYKDQCDDKIMYIDYTNIVKQIDIGKIIFV 156          
BLAST of CX291498 vs. ExPASy Swiss-Prot
Match: KPYK_DEBHA (Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12
Identity = 39/125 (31.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query:  184 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK-KLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFI 546
            + I+GT+GPK+ +VDV+    KAG+++ R +FS G+ EYHQ  ++N K + +  K +  A+ LDT GPE++      +K   +  +  ++ T D    ++   +V+ I++  + K ++ G  I+I
Sbjct:   25 SSIIGTIGPKTNNVDVLVKLRKAGLNIVRMNFSHGSYEYHQSVIDNAKQSEEIYKGRPLAIALDTKGPEIRTGTTIDDKDYPILPNHEMIFTTDEAYAKKCDDKVMFIDYKNITKVIEAGKIIYI 149          
BLAST of CX291498 vs. ExPASy Swiss-Prot
Match: KPYK_CLOPE (Pyruvate kinase OS=Clostridium perfringens GN=pykF PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12
Identity = 45/158 (28.48%), Postives = 77/158 (48.73%), Query Frame = 1
Query:  184 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQE--ATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKDTATL 651
            TK++ T+GP S S +++   ++ GM+ AR +FS G+   H+E +E +K   K  K   A++LD  GP+++  N       LK       T  CG E    +    I++  L + +K G +I +   L           +V EV+G D+ C + +  T+
Sbjct:    4 TKMIFTIGPSSDSEEILREFIRIGMNAARLNFSHGDHASHKEKIELIKRLRKEEKSATAILLDIKGPKIRTYNFKNGEAELKNGDE--FTFSCGDEILGDNTKCSISYKELYEDIKPGGSILVDDGLLE--------FKVKEVRGTDIICEVIEGGTI 151          
BLAST of CX291498 vs. ExPASy Swiss-Prot
Match: KPYK_STAHJ (Pyruvate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pyk PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12
Identity = 49/159 (30.82%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  184 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV---KGNDVTCVIKDTATL 651
            TKIV T+GP S S +++   +KAGM+VAR +FS G+ E H+  ++ ++       K   ++LDT GPE++  +  +  I L+  G  V+      E T +   + ++ L   V+ G  I +   L        V L+V ++   KG +V C I +T  L
Sbjct:    4 TKIVCTIGPASESEEMLEKLMKAGMNVARLNFSHGSHEEHKARIDTIRKVADRLGKTIGILLDTKGPEIRTHDMKDGLIMLE-KGKEVIVSMSQVEGTPEKFSVTYEDLINDVQVGSYILLDDGL--------VELQVKDIDKTKG-EVKCDILNTGEL 152          
BLAST of CX291498 vs. ExPASy Swiss-Prot
Match: KPYK2_YEAST (Pyruvate kinase 2 OS=Saccharomyces cerevisiae GN=PYK2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12
Identity = 39/125 (31.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query:  184 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLEN-LKAAVKTTKKLCAVMLDTVGPELQVVNK-SEKAISLKADGSVVLTPDCGQEATS--QVLPINFDGLAKSVKKGDTIFI 546
            T I+GT+GPK+ S + I+   KAG+++ R +FS G+ E+HQ  +EN +K+  +   +  A+ LDT GPE++     +++ + +  D  ++ T D     TS  +++ I++  L K +  G  I++
Sbjct:   23 TSIIGTIGPKTNSCEAITALRKAGLNIIRLNFSHGSYEFHQSVIENAVKSEQQFPGRPLAIALDTKGPEIRTGRTLNDQDLYIPVDHQMIFTTDASFANTSNDKIMYIDYANLTKVIVPGRFIYV 147          
BLAST of CX291498 vs. ExPASy Swiss-Prot
Match: KPYR_RAT (Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11
Identity = 44/138 (31.88%), Postives = 74/138 (53.62%), Query Frame = 1
Query:  184 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPE-----LQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 564
            T I+ T+GP SRSVD +   +KAGM++AR +FS G+ EYH E++ N++ A ++      + +  A+ LDT GPE     LQ   +SE  I   +   V + P       ++ + +++  + + V  G  I+I   L +
Sbjct:   88 TSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIREATESFATSPLSYRPVAIALDTKGPEIRTGVLQGGPESEVEIVKGSQVLVTVDPKFQTRGDAKTVWVDYHNITRVVAVGGRIYIDDGLIS 225          
BLAST of CX291498 vs. ExPASy Swiss-Prot
Match: KPYR_MOUSE (Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pklr PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11
Identity = 44/138 (31.88%), Postives = 74/138 (53.62%), Query Frame = 1
Query:  184 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPE-----LQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 564
            T I+ T+GP SRSVD +   +KAGM++AR +FS G+ EYH E++ N++ A ++      + +  A+ LDT GPE     LQ   +SE  I   +   V + P       ++ + +++  + + V  G  I+I   L +
Sbjct:   88 TSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIREAAESFATSPLSYRPVAIALDTKGPEIRTGVLQGGPESEVEIVKGSQVLVTVDPKFRTRGDAKTVWVDYHNITQVVAVGGRIYIDDGLIS 225          
BLAST of CX291498 vs. ExPASy Swiss-Prot
Match: KPYR_HUMAN (Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PKLR PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11
Identity = 42/138 (30.43%), Postives = 75/138 (54.35%), Query Frame = 1
Query:  184 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLT--PDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 564
            T I+ T+GP SRSV+ +   +KAGM++AR +FS G+ EYH E++ N++ AV++      + +  A+ LDT GPE++   +    E  + L     V++T  P       +  + +++  + + V  G  I+I   L +
Sbjct:   88 TSIIATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVREAVESFAGSPLSYRPVAIALDTKGPEIRTGILQGGPESEVELVKGSQVLVTVDPAFRTRGNANTVWVDYPNIVRVVPVGGRIYIDDGLIS 225          
The following BLAST results are available for this feature:
BLAST of CX291498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
KPYM_RABIT1.578e-1227.42Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuni... [more]
KPYK_XENLA1.578e-1231.88Pyruvate kinase muscle isozyme OS=Xenopus laevis G... [more]
KPYK_YARLI2.691e-1232.54Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=... [more]
KPYK_DEBHA3.515e-1231.20Pyruvate kinase OS=Debaryomyces hansenii GN=PYK1 P... [more]
KPYK_CLOPE3.515e-1228.48Pyruvate kinase OS=Clostridium perfringens GN=pykF... [more]
KPYK_STAHJ5.996e-1230.82Pyruvate kinase OS=Staphylococcus haemolyticus (st... [more]
KPYK2_YEAST5.996e-1231.20Pyruvate kinase 2 OS=Saccharomyces cerevisiae GN=P... [more]
KPYR_RAT1.023e-1131.88Pyruvate kinase isozymes R/L OS=Rattus norvegicus ... [more]
KPYR_MOUSE1.336e-1131.88Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pk... [more]
KPYR_HUMAN1.744e-1130.43Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PK... [more]

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Properties
Property NameValue
Genbank descriptionC03009H02SK OF2 Citrus clementina cDNA clone C03009H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291498 ID=CX291498; Name=CX291498; organism=Citrus clementina; type=EST; length=710bp
AATAAAATTCAAAACACTCTAATCAACGCTAACCGCTGCCTCTTTCATCT
CTCGTACTCTCTCTGTATCTCTCTGTATCTCTCTGTTCAGTGAAAGATGC
ATTCAAGTCACTTGCTTCTCGAGGAGCCAATCAGGATGGCTTCAATCCTG
GAGCCATCCAAAGCCAGTTTCTTCCCGGCAATGACCAAAATTGTCGGAAC
GCTTGGTCCTAAATCTCGATCTGTTGATGTTATATCCGGTTGCCTCAAAG
CTGGAATGTCTGTGGCTAGATTCGATTTCTCGTGGGGTAATACTGAATAC
CACCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTTAAGACTACTAAGAA
GCTTTGTGCTGTTATGTTGGACACAGTGGGTCCCGAATTGCAGGTTGTTA
ATAAGAGTGAGAAGGCAATTTCACTTAAGGCAGATGGTTCTGTTGTTCTC
ACACCTGACTGTGGACAAGAAGCCACTTCTCAAGTTTTGCCCATCAATTT
CGATGGACTTGCTAAGTCAGTGAAGAAAGGAGACACCATTTTTATCGGTC
AATACTTGTTCACTGGAAGTGAGACTACTTCTGTGTGGCTGGAGGTTTCT
GAAGTGAAAGGAAATGATGTAACTTGTGTGATAAAAGATACTGCAACGTT
GGCTGGTTCACTTTTCACTTTACATGCCTCTCAAATTCGTATTGAACTGC
CAACTCTTTC
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