CX291499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_PYRAB (Translation initiation factor 6 OS=Pyrococcus abyssi GN=eif6 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.302e-24 Identity = 67/182 (36.81%), Postives = 95/182 (52.20%), Query Frame = 2 Query: 77 IPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKL 613 +PV++ SI +RIIG L GN N +L+P D E++ ++++ + + I + +ALGN I ND AL R+ + I D+LGVEV R IAG VGS +N+GGLVHP S E+L+ LS L +V + GT N G + + N G TT E+ IE L Sbjct: 45 VPVIEASIMKSRIIGTLATGNSNAILVPWYVWDTEIERIKSAFKEYGIETEIVPFRTKYTALGNLILTNDKAALVSAKFSRDEAKEIGDILGVEVERGLIAGLHAVGSAGVVTNKGGLVHPEASDEELEWLSELFKVDVYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEIVKIEEALGL 226
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_METB6 (Translation initiation factor 6 OS=Methanoregula boonei (strain 6A8) GN=eif6 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.927e-24 Identity = 65/177 (36.72%), Postives = 94/177 (53.11%), Query Frame = 2 Query: 77 IPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVF 607 + ++ T+I G+ IIG L AGN GL++ TD+EL L+ V + E ++A GN I ND A H DL E E I LGVEV T+ G G +N+G +VHP + +++ L T+ +P+ GT+N GS ++ GL VND G+ T+ EL +E VF Sbjct: 44 VELLVTTIQGSAIIGSLVAGNSRGLVVSGLATDEELAVLKKHRK----VMLLCETMNAAGNVIMANDTFAAVHPDLPAEVAEEIGAFLGVEVIHLTLGGVRTTGMAGVATNKGVIVHPRATAQEIARLETVSGIPVGTGTINMGSGLVGTGLLVNDTGYLAGNATSGFELGRVEDVF 216
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_THEGJ (Translation initiation factor 6 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eif6 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.129e-24 Identity = 65/177 (36.72%), Postives = 93/177 (52.54%), Query Frame = 2 Query: 77 IPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 598 +P+++TS+ +RI+G AGN N L++P D EL + L + + + + RL+A GN I ND AL D RE I D+LGV V R IA VGS +N+GGLVHP + E+L+ LS L +V + GT N G + + + N + G TT E+ IE Sbjct: 45 VPLIETSVMKSRIVGIFVAGNSNALIVPWYIWDAELDFINAQLREYGIDMEVVPFQSRLTAFGNLILANDKGALVSKDFTREEARKIEDILGVPVERGVIADYTAVGSVGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPFVGSCMIANSYGVVVGHLTTGPEIVKIE 221
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_METBU (Translation initiation factor 6 OS=Methanococcoides burtonii (strain DSM 6242) GN=eif6 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.143e-23 Identity = 67/180 (37.22%), Postives = 99/180 (55.00%), Query Frame = 2 Query: 59 AELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 598 AE DV V+ T I G+ ++G L GN NG L+ +L+ + +V V+ + + L+A+GN I ND AL H ++ + E+I+ VLGV+V R TIAG VG +NRG LVHP + ++L L + +P+ GT N GS+ + +GL N GS+TT EL +E Sbjct: 39 AEQLDV-KVISTLINGSIVVGSLSKGNSNGFLISRDANVSDLKDV------EVPVEVLPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVLGVDVHRGTIAGLGTVGMAGVVTNRGLLVHPMVTPDELSVLEDVFALPIELGTTNYGSQAVGSGLLANSKGYVAGSNTTGHELGRVE 211
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_PYRKO (Translation initiation factor 6 OS=Pyrococcus kodakaraensis GN=eif6 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.492e-23 Identity = 66/178 (37.08%), Postives = 97/178 (54.49%), Query Frame = 2 Query: 77 IPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGV-EVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 598 +P+++TSI +RI+G AGN N +++P D EL+ ++ +L + + V + RL+ALGN I ND AL + RE I ++LGV EV R IA VGS +N+GGLVHP + E+L+ LS L V + GT N G + + + N + G TT E+ IE Sbjct: 45 VPIIETSIMKSRIVGIFAAGNSNAIIVPWYIWDAELERIKTALNEFGIDMDVVPFKSRLTALGNLILTNDKAALVSKEFTREEANAIGEILGVDEVERGMIASYRSVGSVGVVTNKGGLVHPEATDEELEWLSDLFGVDIYVGTANMGVPFVGSCMLANSYGVVVGHLTTGPEIVKIE 222
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_SULIY (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.949e-23 Identity = 66/173 (38.15%), Postives = 100/173 (57.80%), Query Frame = 2 Query: 83 VVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 598 +++ I + ++G +GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E++I + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 47 LIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQ 218
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_SULIN (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eif6 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.949e-23 Identity = 66/173 (38.15%), Postives = 100/173 (57.80%), Query Frame = 2 Query: 83 VVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 598 +++ I + ++G +GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E++I + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 47 LIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQ 218
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_SULIL (Translation initiation factor 6 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.949e-23 Identity = 66/173 (38.15%), Postives = 100/173 (57.80%), Query Frame = 2 Query: 83 VVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 598 +++ I + ++G +GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E++I + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 47 LIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQ 218
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_SULIM (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.324e-23 Identity = 66/173 (38.15%), Postives = 100/173 (57.80%), Query Frame = 2 Query: 83 VVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 598 +++ I + ++G +GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E++I + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 47 LIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQ 218
BLAST of CX291499 vs. ExPASy Swiss-Prot
Match: IF6_SULIK (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=eif6 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.324e-23 Identity = 66/173 (38.15%), Postives = 100/173 (57.80%), Query Frame = 2 Query: 83 VVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 598 +++ I + ++G +GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E++I + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND G+ TT E+ I+ Sbjct: 47 LIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVANDKGTLVGASTTGPEILRIQ 218 The following BLAST results are available for this feature:
BLAST of CX291499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291499 ID=CX291499; Name=CX291499; organism=Citrus clementina; type=EST; length=613bpback to top |