CX291508

Overview
NameCX291508
Unique NameCX291508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.730e-54
Identity = 103/200 (51.50%), Postives = 137/200 (68.50%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMA-SAEEEFTWFLDKDATSKL 590
            EPPY   +DWAKW+VFW DERVV K+HDDSNYKLA D  LSKV +   ++ +IND +SAE AA +YE  ++ + +S  +A S  +  P+FDL+LLGMG DGH+ASLFP HP L+  + WVTF+ DS KPPPERITFT PVINS+A + +V  G  K++A+  A+ +     +S  LP ++   +     WF+DK A SKL
Sbjct:   62 EPPYDKIVDWAKWYVFWADERVVAKNHDDSNYKLAKDNLLSKVNVFPRHICSINDTVSAEEAATEYEFAIRQMVRSRTVAASDNSDSPRFDLILLGMGSDGHVASLFPNHPALEVKDDWVTFLTDSHKPPPERITFTLPVINSAANVVVVATGESKANAIHLAIDDLPLPDSSLSLPARLVHPSNGNLIWFMDKQAGSKL 261          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.393e-51
Identity = 98/200 (49.00%), Postives = 132/200 (66.00%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMAS-AEEEFTWFLDKDATSKL 590
            E PY  ++DW+KW++FW DER V K+H DS YK   + FLSKVPI  G+VY+IND ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+ AV  A+ +     ++  +P +M    + +  WFLDK + S L
Sbjct:   83 EAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAPSIPARMVQPTDGKLVWFLDKASASFL 282          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 6.393e-51
Identity = 98/200 (49.00%), Postives = 132/200 (66.00%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGN---NQNSDLLPVQMAS-AEEEFTWFLDKDATSKL 590
            E PY  ++DW+KW++FW DER V K+H DS YK   + FLSKVPI  G+VY+IND ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+ AV  A+ +     ++  +P +M    + +  WFLDK + S L
Sbjct:   83 EAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGAEGPDAPSIPARMVQPTDGKLVWFLDKASASFL 282          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_RAT (6-phosphogluconolactonase OS=Rattus norvegicus GN=Pgls PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.431e-34
Identity = 80/187 (42.78%), Postives = 109/187 (58.29%), Query Frame = 3
Query:   30 WAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 590
            +A+W + + DER+VP DH +S Y L     LSK+PI    V  I+ AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFPGHPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L  +Q S L    +        WFLD+ A   L
Sbjct:   70 FARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTIDPALPVEDAAEDYARKLRQAFQGDTV--------PVFDLLILGVGPDGHTCSLFPGHPLLQEREKIVAPIGDSPKPPPQRVTLTLPVLNAAQSVIFVATGEGKAAVLKRIL-EDQESALPAAMVQPRTGALCWFLDEAAARLL 247          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_MOUSE (6-phosphogluconolactonase OS=Mus musculus GN=Pgls PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34
Identity = 80/188 (42.55%), Postives = 109/188 (57.98%), Query Frame = 3
Query:   30 WAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEE-EFTWFLDKDATSKL 590
            +A+W + + DER+VP DH +S Y L     LSK+PI    V  IN AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  I  V  G GK++ ++  L + + +  LP  +         WFLD+ A   L
Sbjct:   70 FARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTINPALPVEDAAEDYARKLRQALQGDAV--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLKRILEDKEGT--LPAALVQPRTGALCWFLDEAAARLL 247          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_BOVIN (6-phosphogluconolactonase OS=Bos taurus GN=PGLS PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34
Identity = 77/186 (41.40%), Postives = 109/186 (58.60%), Query Frame = 3
Query:   33 AKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 590
            A+W + + DER+VP +H +S Y L     LSK+PI    V  IN AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L + + + L    +  +  +  WFLD+ A   L
Sbjct:   71 ARWTLGFCDERLVPFEHAESTYGLYRTHLLSKLPIFDSQVITINPALPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIYVATGEGKAAILKRILEDKEENPLPAALVQPSAGKLCWFLDEAAARLL 248          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_HUMAN (6-phosphogluconolactonase OS=Homo sapiens GN=PGLS PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.101e-34
Identity = 76/186 (40.86%), Postives = 107/186 (57.53%), Query Frame = 3
Query:   33 AKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 590
            A+W + + DER+VP DH +S Y L     LS++PI    V  IN  L  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK++ ++  L + + + L    +     +  WFLD+ A   L
Sbjct:   71 ARWTLGFCDERLVPFDHAESTYGLYRTHLLSRLPIPESQVITINPELPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPHTGKLCWFLDEAAARLL 248          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCTU (6-phosphogluconolactonase OS=Mycobacterium tuberculosis GN=pgl PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.089e-32
Identity = 80/191 (41.88%), Postives = 107/191 (56.02%), Query Frame = 3
Query:   24 IDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 590
            I+W+K H+FW DER VP+D D+ N K A    L+ V I +  V+ +  A S      D +     L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP RIT T P I  S  + ++V G GK+ AV  A+G   +   +P   A   +   W LD+DA +KL
Sbjct:   60 IEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPM--AASDGDFGGDLDAAA--LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIG-GADPVSVPAAGAVGRQNTLWLLDRDAAAKL 245          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCBO (6-phosphogluconolactonase OS=Mycobacterium bovis GN=pgl PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.089e-32
Identity = 80/191 (41.88%), Postives = 107/191 (56.02%), Query Frame = 3
Query:   24 IDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 590
            I+W+K H+FW DER VP+D D+ N K A    L+ V I +  V+ +  A S      D +     L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP RIT T P I  S  + ++V G GK+ AV  A+G   +   +P   A   +   W LD+DA +KL
Sbjct:   60 IEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPM--AASDGDFGGDLDAAA--LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIG-GADPVSVPAAGAVGRQNTLWLLDRDAAAKL 245          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_SCHPO (Probable 6-phosphogluconolactonase OS=Schizosaccharomyces pombe GN=SPCC16C4.10 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 73/198 (36.87%), Postives = 107/198 (54.04%), Query Frame = 3
Query:   24 IDWAKWHVFWVDERVVPKDHDDSNYKLA-------YDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEE--EFTWFLDKDATSKL 590
            I+++KW VF+ DER+VP D ++SNY L        ++GF  K   T        + +  +  A++YE  L H     + A S+    P FDL+LLG GPDGH  SLFP H +L+E+  WV  + DSPKPP +RIT T PV+  +  IA V  GAGK   +   +     +  LP  + +       +WF+D +A++ L
Sbjct:   57 IEFSKWEVFFADERIVPLDDENSNYALCKKLIFDKFEGFDPKKIHTINPELLKENPIDPQNVADEYEKQLVH-----VFANSSTVKVPVFDLLLLGCGPDGHTCSLFPDHEVLQEDVAWVAPVTDSPKPPKDRITLTLPVVTHAQAIAFVTTGAGKKDILPIVI--EDFTSKLPSALITRNNLTRTSWFVDDEASANL 247          
The following BLAST results are available for this feature:
BLAST of CX291508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
6PGL1_ARATH4.730e-5451.50Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL1_ORYSJ6.393e-5149.00Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL1_ORYSI6.393e-5149.00Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL_RAT1.431e-3442.786-phosphogluconolactonase OS=Rattus norvegicus GN=... [more]
6PGL_MOUSE2.440e-3442.556-phosphogluconolactonase OS=Mus musculus GN=Pgls ... [more]
6PGL_BOVIN2.440e-3441.406-phosphogluconolactonase OS=Bos taurus GN=PGLS PE... [more]
6PGL_HUMAN7.101e-3440.866-phosphogluconolactonase OS=Homo sapiens GN=PGLS ... [more]
6PGL_MYCTU5.089e-3241.886-phosphogluconolactonase OS=Mycobacterium tubercu... [more]
6PGL_MYCBO5.089e-3241.886-phosphogluconolactonase OS=Mycobacterium bovis G... [more]
6PGL_SCHPO6.221e-3036.87Probable 6-phosphogluconolactonase OS=Schizosaccha... [more]

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Properties
Property NameValue
Genbank descriptionC03010A07SK OF2 Citrus clementina cDNA clone C03010A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291508 ID=CX291508; Name=CX291508; organism=Citrus clementina; type=EST; length=701bp
TGGAACCCCCGTATGTAGATTCAATTGACTGGGCGAAATGGCATGTGTTT
TGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAGCAATTATAA
GCTTGCTTATGATGGTTTCCTTTCTAAGGTACCAATTACCACTGGCAATG
TCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCTGAAGATTAT
GAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTAGCTACATCTGC
TGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAG
ATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAAT
GAAAAATGGGTTACTTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAG
AATCACTTTCACCTTCCCTGTAATCAACTCATCTGCATATATTGCAATGG
TGGTGTGTGGTGCTGGAAAATCAAGTGCAGTTCAAACTGCATTGGGTAAT
AATCAAAACTCTGATTTGCTGCCAGTTCAAATGGCATCGGCTGAAGAAGA
ATTTACTTGGTTTCTTGACAAAGACGCGACTTCAAAGCTGTAAGAGTCGG
AACAATTAGCTGTATGCGTGAATCCCTGTTATCTGCTATGATAATTGGTT
TGATCTGTGTGGTTTGACTACTAGTACTGCTGGATTTTGTTAGTAATGAG
A
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