CX291508

Overview
NameCX291508
Unique NameCX291508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: SOL2_YEAST (6-phosphogluconolactonase-like protein 2 OS=Saccharomyces cerevisiae GN=SOL2 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 65/193 (33.68%), Postives = 95/193 (49.22%), Query Frame = 3
Query:   18 DSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPIT---TGNVYAINDALSAEGAAEDYETCLKHLTKSNI--LATSAATGFPKFDLMLLGMGPDGHIASLFPG-HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDA 578
            D + W  W +++ DER+VP   ++SNY  A    L  +      T  VY I+++L      +D + C  +  K  I   A   +   P FDL LLG  PDGHIASLFP     L+E   WV  ++++P  P  RI+ T PVI  S  +  VV GA K+  ++T +   +      +    A    +WF+D DA
Sbjct:  109 DDVRWGDWDIYFADERLVPFSSNESNYGCAKRKILDLIDTAKYGTPKVYHIDESL-----IDDPQECADNYEKVLIRGFAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQDNLREKLAWVVPVENAPSGPSTRISLTIPVICHSHRVTFVVEGATKAPIIKTIMERPEKGLPSSIVNEGAAGRVSWFVDDDA 296          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_THEMA (6-phosphogluconolactonase OS=Thermotoga maritima GN=pgl PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.176e-20
Identity = 61/181 (33.70%), Postives = 90/181 (49.72%), Query Frame = 3
Query:   30 WAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDK 572
            W + H F  DER VP D D SN++   +   S+  I +GNV+ ++ +L  E A E YE  ++  T              +FDL +LGMGPDGH+AS+F      K+N   VTF   S  P   R+T TF  +N+S Y+  ++ G  K + +   L +      LP      +E+  WF+ K
Sbjct:   59 WNRIHFFLSDERYVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSAT-------------DQFDLAILGMGPDGHVASIFDLETGNKDN--LVTFTDPSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDTP----LPAYFVRGKEKTVWFVGK 220          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_CAEEL (Putative 6-phosphogluconolactonase OS=Caenorhabditis elegans GN=Y57G11C.3 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 61/192 (31.77%), Postives = 95/192 (49.48%), Query Frame = 3
Query:   18 DSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEG-AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEK--WVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATS 584
            + ++W +  +F VDER V  D ++SN       +L   P    +V+            A+ YE  L+       L  +A     +FD++ LG+GPDGH AS+FPG   L++  +  WV+ I DSPKPPP RIT T   +  +  +A ++CG  K+  V+     +Q       Q     ++ T FLD+DA +
Sbjct:   71 EQLNWKRIRIFMVDERNVDLDSEESNQ----GEYLRLFPNELRDVFVPMQIFKDPCLTAQHYEISLRKYLLPEQLNNTA-----RFDILFLGVGPDGHTASIFPGKERLEKITELNWVSVITDSPKPPPSRITLTLQTLQHAKNVAFIICGKQKAEIVRGICDRDQKYP--AAQARPFNDKLTLFLDEDAAT 251          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: SOL4_YEAST (6-phosphogluconolactonase 4 OS=Saccharomyces cerevisiae GN=SOL4 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.940e-19
Identity = 68/205 (33.17%), Postives = 104/205 (50.73%), Query Frame = 3
Query:   24 IDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGN-------VYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP-KFDLMLLGMGPDGHIASLFPG---HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTAL--GNNQNSDLLPVQMASAEEEFTWFLDKDATSKL*ES 599
            I W +W +F+ DER+VP +   SNY       L  + +  GN       VY IN++L   G            T +  +A   A+  P  FDL+LLG G DGH  SLFPG   + L++E ++ V +  +SPK P +RITFT  V+  +  +  +V GA K + +   L   N++   +L  +M     + TWFLD +A + + E+
Sbjct:   64 IKWPQWRIFFCDERLVPFEDPQSNYGQFKKTVLDPL-VHQGNQLNLGPTVYTINESLIGGGE-----------TANRKIAEEYASMLPASFDLILLGCGEDGHTCSLFPGVEFNYLVEEMDRKVLWCNNSPKAPKDRITFTLAVVAEAKSVCFLVRGAAKKAIMHDVLIVKNSELPSVLVNEMVGT--KVTWFLDDEAGALIPEN 254          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 53/187 (28.34%), Postives = 91/187 (48.66%), Query Frame = 3
Query:   21 SIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ-MASAEEEFTWFLDKDA 578
            S  WA  H++ VDER VP    DSN++      L  V +   N++ +   L     AE+ +    + ++ + L  +++     FDL+LLGMG DGH ASLFP  P   + ++ V  + +SP  P +R++ + P+IN +  +A++V G  K                 P+  +     +  W++D +A
Sbjct:  606 SFPWAHTHLWLVDERCVPLSDPDSNFQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANSS-----FDLVLLGMGTDGHTASLFPQSPTGLDGDQLVV-LTESPFRPHQRMSLSLPLINRAKKVAVLVMGRTKREITTLVSRVGHEPKKWPISGVVPLSGQLVWYMDYEA 786          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_PSEPU (6-phosphogluconolactonase OS=Pseudomonas putida GN=pgl PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15
Identity = 55/171 (32.16%), Postives = 83/171 (48.54%), Query Frame = 3
Query:   18 DSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKD----SPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDL 518
            + +DWAK  V   DER VP +H DSN  L     L+        V     A + + AA              + A  A TG P  D+++LGMG DGH ASLFP  P L+      +  +     +P  P +R++ T  ++ S+A+IA+ V G GK + ++ AL  N  +++
Sbjct:   70 EPLDWAKVTVSLADERWVPVEHADSNAGLLARHLLTGAAAKARFVGLYQQAENLDAAA--------------LKADQALTGLPPIDVLVLGMGDDGHTASLFPASPNLEAGLDLASTRRCLPLLAPSVPHQRLSMTRSLLASAAFIALSVQGPGKLATLRAALAGNDLTEM 226          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: G6PE_HUMAN (GDH/6PGL endoplasmic bifunctional protein OS=Homo sapiens GN=H6PD PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 54/184 (29.35%), Postives = 87/184 (47.28%), Query Frame = 3
Query:   30 WAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ-MASAEEEFTWFLDKDA 578
            WA  H++ VDER VP    +SN++      L  V I   N++ +   L     AE+ +    +  + + L  +++     FDL+LLGMG DGH ASLFP  P   + E+ V  +  SP  P  R++ + P+IN +  +A++V G  K                 P+  +     +  W++D DA
Sbjct:  611 WAHTHLWLVDERCVPLSDPESNFQGLQAHLLQHVRIPYYNIHPMPVHLQQRLCAEEDQGAQIYAREISALVANSS-----FDLVLLGMGADGHTASLFPQSPTGLDGEQLVV-LTTSPSQPHRRMSLSLPLINRAKKVAVLVMGRMKREITTLVSRVGHEPKKWPISGVLPHSGQLVWYMDYDA 788          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_TREPA (6-phosphogluconolactonase OS=Treponema pallidum GN=pgl PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13
Identity = 45/149 (30.20%), Postives = 69/149 (46.31%), Query Frame = 3
Query:   24 IDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 470
            +DW +   FW DER VP     SN+ + +   L  + I    V+ +    + E A   Y   ++              G P FD++LLGMG DGH AS+FP H +   +      +   P    +R++FT  +IN++  I +VV G  K
Sbjct:   55 LDWKRLRFFWSDERCVPPTDAQSNFNMTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIE-------ARLPRQRGVPCFDIILLGMGADGHTASIFP-HEIELWDHSGCCVVATHPDTGQKRVSFTGHLINNAHEIYVVVTGREK 195          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_AGGAC (6-phosphogluconolactonase OS=Aggregatibacter actinomycetemcomitans GN=pgl PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12
Identity = 52/197 (26.40%), Postives = 84/197 (42.64%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFT-WFLDKDATSKL 590
            + PY + I+W   H +W D+R+V     +SNY          + I   N++ I          + ++  L  +    +           FD ++LGMG DGH +SLFP H    ++E  +  I   P+    RI+ T  +I  +  I  +V G GK+  ++        +   P     A+   T W+LDKDA   L
Sbjct:   49 QSPYAEQINWRNLHFWWGDDRMVSPSDPESNYGEVQKLLFDHIQIPAENIHRIRGENEPHFELKRFQAELSAVISDGV-----------FDWIILGMGADGHTSSLFP-HQTNFDDEN-LAVIAKHPESGQIRISKTAKLIEQAKRITYLVTGEGKAEILKEIQSTPAENLPYPAAKIYAKNGVTEWYLDKDAAKLL 232          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL_BORBU (6-phosphogluconolactonase OS=Borrelia burgdorferi GN=pgl PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12
Identity = 50/169 (29.59%), Postives = 83/169 (49.11%), Query Frame = 3
Query:   42 HVFWVDERVVPKDHDDSNYKLAYDGFLSKVP----ITTGNVYA-INDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQM 533
            H F VDER VP + ++SNY L    F SK+     I+    +A +   +    A  DY   ++  ++ NI           FD +++ +G DGHIASLFP   LL  + +   +  +SPK P +RI+ T   +  S  + ++  G  K  A++  L +N + +  P ++
Sbjct:   58 HFFLVDERCVPLNDENSNYNLLNKNFFSKMVDKNLISISKFHAFVYSEIDEATAIHDYN--IEFNSRFNI-----------FDFIIVSVGEDGHIASLFPSRKLLFSDVEGYQYEYNSPKFPSKRISLTPKSLFGSKAVVLLFMGVDKKCALENFLASNSSINECPARL 213          
The following BLAST results are available for this feature:
BLAST of CX291508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
SOL2_YEAST2.369e-2133.686-phosphogluconolactonase-like protein 2 OS=Saccha... [more]
6PGL_THEMA1.176e-2033.706-phosphogluconolactonase OS=Thermotoga maritima G... [more]
6PGL_CAEEL2.218e-1931.77Putative 6-phosphogluconolactonase OS=Caenorhabdit... [more]
SOL4_YEAST4.940e-1933.176-phosphogluconolactonase 4 OS=Saccharomyces cerev... [more]
G6PE_MOUSE2.537e-1528.34GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
6PGL_PSEPU7.382e-1532.166-phosphogluconolactonase OS=Pseudomonas putida GN... [more]
G6PE_HUMAN1.259e-1429.35GDH/6PGL endoplasmic bifunctional protein OS=Homo ... [more]
6PGL_TREPA5.290e-1330.206-phosphogluconolactonase OS=Treponema pallidum GN... [more]
6PGL_AGGAC2.010e-1226.406-phosphogluconolactonase OS=Aggregatibacter actin... [more]
6PGL_BORBU2.626e-1229.596-phosphogluconolactonase OS=Borrelia burgdorferi ... [more]

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Properties
Property NameValue
Genbank descriptionC03010A07SK OF2 Citrus clementina cDNA clone C03010A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291508 ID=CX291508; Name=CX291508; organism=Citrus clementina; type=EST; length=701bp
TGGAACCCCCGTATGTAGATTCAATTGACTGGGCGAAATGGCATGTGTTT
TGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAGCAATTATAA
GCTTGCTTATGATGGTTTCCTTTCTAAGGTACCAATTACCACTGGCAATG
TCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCTGAAGATTAT
GAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTAGCTACATCTGC
TGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAG
ATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAAT
GAAAAATGGGTTACTTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAG
AATCACTTTCACCTTCCCTGTAATCAACTCATCTGCATATATTGCAATGG
TGGTGTGTGGTGCTGGAAAATCAAGTGCAGTTCAAACTGCATTGGGTAAT
AATCAAAACTCTGATTTGCTGCCAGTTCAAATGGCATCGGCTGAAGAAGA
ATTTACTTGGTTTCTTGACAAAGACGCGACTTCAAAGCTGTAAGAGTCGG
AACAATTAGCTGTATGCGTGAATCCCTGTTATCTGCTATGATAATTGGTT
TGATCTGTGTGGTTTGACTACTAGTACTGCTGGATTTTGTTAGTAATGAG
A
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