CX291514

Overview
NameCX291514
Unique NameCX291514
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN4_ORYSJ (Mannan endo-1,4-beta-mannosidase 4 OS=Oryza sativa subsp. japonica GN=MAN4 PE=2 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 5.888e-60
Identity = 115/232 (49.57%), Postives = 150/232 (64.66%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNP-NFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSL-KTSGAN--QRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTE-----GLDSYRDGYEVIFSENPSTATIITDQSQKL 669
            H+KTVLTR+NT+TGVAYKD+PTI AWELMNEPRCYADP+G  +Q W+ EMA YVKS+DG HL+  GLEGFYG    E ++ NP     GT+++A ++  ++DFAT+H YPD WL  SS + Q +F  NW  +HI      L  P+L+ E+GK L K  GAN  QR+   D V  AIY             FWQL  +     G+DS RDGYE+I +E+   A+II + S++L
Sbjct:  166 HVKTVLTRVNTLTGVAYKDDPTIFAWELMNEPRCYADPTGAMVQAWVEEMAPYVKSVDGRHLVTPGLEGFYGAGEHESKELNPWGIYYGTNYVATHRTAAVDFATIHLYPDVWLWGSSADEQATFFRNWTRSHIDATAAYLGMPLLVTEYGKFLWKEVGANKAQRNYFLDLVLDAIYASASRGGPLVGGAFWQLLLDGDIVAGMDSLRDGYEIILAEDSRAASIIGEHSEQL 397          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN3_ORYSJ (Mannan endo-1,4-beta-mannosidase 3 OS=Oryza sativa subsp. japonica GN=MAN3 PE=2 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 5.511e-58
Identity = 113/233 (48.50%), Postives = 148/233 (63.52%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSID-GNHLLEAGLEGFYGPSSSEKQQYNP-NFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSL-KTSGAN--QRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTE-----GLDSYRDGYEVIFSENPSTATIITDQSQKL 669
            H+K VLTR+NTVTGVAYKD+PTI AWELMNEPRC ADP+G  +Q W+ EMA YVK +D G HL+ AGLEGFYG    E ++ NP     GT+++A ++   +DFAT+H YPD WL  S+ + Q +F  NW  +H+ D    L KP+L+ E+GK L K  GAN  QR+   D V  AIY             FWQL  +     G+D  RDGYE+I +E+   A+II + S++L
Sbjct:  172 HVKAVLTRVNTVTGVAYKDDPTIFAWELMNEPRCDADPTGGMVQAWVEEMAPYVKRVDGGRHLVTAGLEGFYGDGEHESKELNPWGIYYGTNYVATHRAAGVDFATIHLYPDVWLWGSTADEQAAFFRNWTRSHVHDTAAFLGKPLLVTEYGKFLWKGGGANKTQRNYFLDVVLDAIYASASRGGPLVGGAFWQLLLDDDVVAGMDDLRDGYEIILAEDSRAASIIGEHSEQL 404          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN4_ARATH (Putative mannan endo-1,4-beta-mannosidase 4 OS=Arabidopsis thaliana GN=MAN4 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.039e-56
Identity = 110/228 (48.25%), Postives = 144/228 (63.16%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSE-KQQYNP--NFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSGAN--QRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKL 669
            H+KTVL R+NT T VAYKDEP IMAW+LMNEPRC  D SGKT+ DWI EMA +VKS+D NHLL  G EGFYG SS E K   NP     VG DFIAN+ I +IDFA++H   D W       S+++F+  WL  HI+DAQ+IL+KP++LAEFG    T       RD +F T Y  IY            +FW++ +EG+ ++     +I S+  ST  II++ ++K+
Sbjct:  172 HVKTVLNRVNTFTKVAYKDEPAIMAWQLMNEPRCGVDKSGKTLMDWINEMAPFVKSVDPNHLLSTGHEGFYGDSSPERKNSLNPVSANTVGADFIANHNIDAIDFASMHCGSDLWFQRLDQNSRLAFIKRWLEGHIEDAQNILKKPVILAEFGLGSDTPRYTLANRDGVFTTTYDIIYASAQKGGSAAGALFWEVISEGMSNFAGPSSIILSDKSSTVNIISEHARKM 399          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN8_ORYSJ (Mannan endo-1,4-beta-mannosidase 8 OS=Oryza sativa subsp. japonica GN=MAN8 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 3.949e-56
Identity = 108/222 (48.65%), Postives = 142/222 (63.96%), Query Frame = 1
Query:    4 IKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNP---NFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTS--GANQRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITD 654
            ++ V+TRINTVT   YKD+PTI+AWEL+NEPRC +DPSG T+Q WI EMASYVKSID  HLLE G+EGFYG S+ E    NP   +   GTDFI N+Q P ID A++H Y D WLP S  E+ + F++ W+  HI DA ++L  PI++ EFG S+K    G   R+    TVY                + WQLF EG +   DGY VIF+++PST +++ +
Sbjct:  144 VEAVVTRINTVTNETYKDDPTILAWELINEPRCPSDPSGDTLQAWIEEMASYVKSIDPVHLLEIGIEGFYGLSTPELLPVNPDEYSGHAGTDFIRNHQAPGIDLASIHVYSDTWLPHSIKENHLQFVDKWMQQHIHDAANLLGMPIVVGEFGVSVKDGKFGNEFREDFMKTVYRIFLSSWKEGVIGGGCLLWQLFPEGAEHMDDGYAVIFAKSPSTLSLLAN 365          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN6_ARATH (Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis thaliana GN=MAN6 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.949e-56
Identity = 104/228 (45.61%), Postives = 144/228 (63.16%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPN---FQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSGANQ--RDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKL 669
            H++TVL R+NT T + YK++PTI AWELMNEPRC +DPSG  +Q WI EMA +VKS+D  HL+E GLEGFYGPS+  + ++NPN    QVGTDFI NNQ+  IDFA++H YPD W+  +   S + F ++W+  H++DA+  L  P+L  EFG S    G N   RD + +TVY                + WQ+F +G +   DGY V  +   + + II+ QS++L
Sbjct:  189 HVRTVLNRVNTFTNITYKNDPTIFAWELMNEPRCPSDPSGDKLQSWIQEMAVFVKSLDAKHLVEIGLEGFYGPSAPARTRFNPNPYAAQVGTDFIRNNQVLGIDFASVHVYPDSWISPAVSNSFLEFTSSWMQAHVEDAEMYLGMPVLFTEFGVSAHDPGFNTSFRDMMLNTVYKMTLNSTRKGGAGAGSLVWQVFPQGAEFMDDGYAVYLTRAHTASKIISLQSKRL 416          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN7_ORYSJ (Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa subsp. japonica GN=MAN7 PE=2 SV=3)

HSP 1 Score: 216.468 bits (550), Expect = 1.149e-55
Identity = 106/222 (47.75%), Postives = 141/222 (63.51%), Query Frame = 1
Query:    4 IKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNP---NFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTS--GANQRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITD 654
            ++ V+TRINTVT   YKD+PTI+AWEL+NEPRC +DPSG T+Q W+ EMASYVKSID  HLLE G+EGFYGPS  E    NP   +   G DFI N+Q P ID A++H Y D WLP S  E+ + F++ W+  HI DA ++L  PI++ EFG S+K    G   R+    T+Y                + WQLF EG +   DGY VIF+++PST +++ +
Sbjct:  151 VEAVVTRINTVTNETYKDDPTILAWELINEPRCPSDPSGDTLQAWMEEMASYVKSIDPVHLLEIGIEGFYGPSIPELLPVNPDEYSGHAGIDFIRNHQAPGIDLASIHVYSDIWLPQSIKENHLQFVDKWMQQHIDDAANLLGMPIVVGEFGVSVKDGKFGNEFREDFMKTIYRIFLSSWKEGVIGGGCLLWQLFPEGAEHMDDGYAVIFAKSPSTLSLLAN 372          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN2_ORYSJ (Mannan endo-1,4-beta-mannosidase 2 OS=Oryza sativa subsp. japonica GN=MAN2 PE=2 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 1.960e-55
Identity = 105/234 (44.87%), Postives = 147/234 (62.82%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSS-EKQQYNPN----FQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSGAN--QRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRIR 681
            ++KT+L R N +TG+ Y+D+PTI+AWELMNEPRC +DPSG T+Q W+ EM++YVKSID  HLL  G EGFYGP+SS EK   NP        G DFI N++I  IDFA++H YPD WL  +S + ++ F+  W+  H++D    L KP+L+ EFG S +  G     RD L+  VY  ++            + WQL  EG++ Y DG+ ++ SE PS   +I +QS +L  +R
Sbjct:  197 YLKTLLMRKNHLTGLEYRDDPTILAWELMNEPRCTSDPSGDTLQRWMEEMSAYVKSIDKKHLLTVGTEGFYGPTSSQEKLNINPGEWFPNNYGADFIRNSKIQDIDFASVHVYPDNWLQHASLDEKLKFMTRWITAHVEDGDGELEKPVLVTEFGLSHQVEGFEDAHRDVLYRAVYDIVHGSARRGGAAGGALVWQLAAEGMEEYHDGFSIVPSERPSMMRLIKEQSCRLAAVR 430          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN2_ARATH (Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis thaliana GN=MAN2 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.396e-53
Identity = 96/231 (41.56%), Postives = 145/231 (62.77%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPN---FQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKS--LKTSGANQRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRI 678
            ++  +LTR N++TG+ Y+++PTI AWEL+NEPRC +D SG T+QDWI EM +++KSID  HLL  GLEGFYGPSS +K   NP     ++G+DF+ N+  P+IDFA++H YPD W      E ++ F+  W+ +HI+D    L+KP+L  EFG S   K    +QRD+ + T++  IY            + WQ   EG++ + D + ++  E  S   ++ +QS +L+RI
Sbjct:  185 YLTVLLTRKNSLTGIEYRNDPTIFAWELINEPRCMSDVSGDTLQDWINEMTAFIKSIDNKHLLTVGLEGFYGPSSPKKLTVNPERWASELGSDFVRNSDSPNIDFASVHIYPDHWFHDQGFEEKLKFVVKWMLSHIEDGDKELKKPVLFTEFGLSNLNKDYDPSQRDRFYRTIFDVIYKSAKRKRSGAGTLVWQFLIEGMEGFNDDFGIVPWEQDSIQRLMIEQSCRLSRI 415          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN6_ORYSJ (Mannan endo-1,4-beta-mannosidase 6 OS=Oryza sativa subsp. japonica GN=MAN6 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 3.129e-53
Identity = 102/234 (43.59%), Postives = 146/234 (62.39%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPN---FQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSGAN-----QRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRI 678
            ++K +LTR N+ + + Y DEP I AWELMNEPRC ++ SG  +Q WI EMA+YVKS+D NHL+  G EGFYGP  +E+   NP      + +DFI N+ +  IDFA++H+YPD WLP +S E ++ +L+NW+ +H+ D++ IL+KP+L  E G  L+ S AN      RD +   VY  IY            + WQL  EG   Y D + V+  + PST ++IT+QS +L R+
Sbjct:  194 YVKAILTRRNSYSRIRYSDEPAIFAWELMNEPRCVSNSSGPYLQAWIAEMAAYVKSLDTNHLVTVGTEGFYGPGIAERLGVNPGEWAASLCSDFIQNSAVEHIDFASVHAYPDSWLPRASLEEKVRYLSNWVDSHLNDSEQILKKPVLFTEVG-YLQHSDANSNSTVDRDIILRIVYDKIYDSARKLQAGSGALIWQLMVEGTHMYGDNFSVVARDRPSTYSLITNQSCRLQRL 426          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN5_ORYSJ (Putative mannan endo-1,4-beta-mannosidase 5 OS=Oryza sativa subsp. japonica GN=MAN5 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 3.129e-53
Identity = 107/233 (45.92%), Postives = 145/233 (62.23%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSS-SEKQQYNPNFQV---GTDFIANNQIPSIDFATLHSYPDQWLPS-SSDESQISFLNNWLYNHIQDAQDIL-RKPILLAEFGKSLKTS----GANQRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKL 669
            H+  VLTR+N  TGVAY+D+PTIMAWELMNEPRC +DP+G T+Q WI EMA +VKS+D  HLL  G EGFYGPSS   + + NPN  V   G DF+ N+++  +DFA++H YPD WLP+ ++ E+Q+ F  +W+  HI DA+  L   P+L AEFG S + +     A  RD   + VY A+             + WQ+F EG D   DGY V+     +TA I+   S++L
Sbjct:  219 HVTAVLTRVNAYTGVAYRDDPTIMAWELMNEPRCASDPTGDTLQAWIAEMAFHVKSVDPAHLLGVGAEGFYGPSSPPARLRVNPNADVALAGADFVRNHRVLGVDFASVHVYPDTWLPAGATKEAQLRFATSWVEAHIADAEGALGGMPVLFAEFGVSTRGARAAFNATSRDAFIEAVYGAMLRSTRRGGGGAGALLWQVFPEGTDYMDDGYAVVLPRAAATAGIVAAHSRRL 451          
The following BLAST results are available for this feature:
BLAST of CX291514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MAN4_ORYSJ5.888e-6049.57Mannan endo-1,4-beta-mannosidase 4 OS=Oryza sativa... [more]
MAN3_ORYSJ5.511e-5848.50Mannan endo-1,4-beta-mannosidase 3 OS=Oryza sativa... [more]
MAN4_ARATH1.039e-5648.25Putative mannan endo-1,4-beta-mannosidase 4 OS=Ara... [more]
MAN8_ORYSJ3.949e-5648.65Mannan endo-1,4-beta-mannosidase 8 OS=Oryza sativa... [more]
MAN6_ARATH3.949e-5645.61Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis ... [more]
MAN7_ORYSJ1.149e-5547.75Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa... [more]
MAN2_ORYSJ1.960e-5544.87Mannan endo-1,4-beta-mannosidase 2 OS=Oryza sativa... [more]
MAN2_ARATH2.396e-5341.56Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis ... [more]
MAN6_ORYSJ3.129e-5343.59Mannan endo-1,4-beta-mannosidase 6 OS=Oryza sativa... [more]
MAN5_ORYSJ3.129e-5345.92Putative mannan endo-1,4-beta-mannosidase 5 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionC03010B02SK OF2 Citrus clementina cDNA clone C03010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291514 ID=CX291514; Name=CX291514; organism=Citrus clementina; type=EST; length=713bp
CATATCAAGACTGTTCTTACGAGAATAAACACTGTGACCGGAGTTGCTTA
CAAAGATGAACCAACGATTATGGCTTGGGAGCTTATGAATGAGCCAAGAT
GTTATGCAGATCCATCGGGAAAAACCATTCAGGATTGGATTACAGAGATG
GCTTCTTATGTAAAATCAATTGATGGAAATCACTTATTAGAAGCTGGTTT
AGAAGGGTTCTATGGACCATCGTCATCTGAGAAGCAGCAATACAATCCAA
ATTTTCAAGTAGGAACAGATTTCATTGCAAACAATCAAATTCCCAGCATT
GATTTTGCTACACTTCATTCTTATCCAGATCAATGGCTTCCCAGCTCCAG
TGATGAAAGCCAAATTTCATTCTTGAACAATTGGCTCTACAATCATATCC
AAGATGCACAGGACATTCTTCGGAAGCCAATTCTCTTAGCGGAGTTTGGA
AAATCTTTGAAAACCTCTGGTGCCAACCAAAGGGACCAGCTGTTTGATAC
GGTCTACTCGGCAATTTATTCGTCAGCCAGGAGTGGCGGTGCAGCTGTTG
GTGGCATGTTCTGGCAACTTTTTACCGAAGGATTAGACTCTTACCGTGAT
GGGTATGAGGTGATCTTCAGTGAGAACCCCTCGACTGCAACCATCATCAC
TGACCAATCTCAGAAGCTCAATCGAATTCGAAAGATGTATGTCAGACTGA
GAAACGTTCAGAA
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