CX291514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN5_ARATH (Mannan endo-1,4-beta-mannosidase 5 OS=Arabidopsis thaliana GN=MAN5 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.087e-53 Identity = 96/231 (41.56%), Postives = 146/231 (63.20%), Query Frame = 1 Query: 1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPN---FQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKS--LKTSGANQRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRI 678 ++K +LTR N+VTG+ Y+++PTI AWEL+NEPRC D SGKT+QDWI EM ++KSID HLL GLEGFYGP+S + NP Q+GTDF+ N+ +IDFA++H YPD W + + E ++ F+ W+ +HI+D L+KP+L EFG S K +QRD+ + ++ +Y + WQLF EG++++ D + ++ E S ++ +QS +L ++ Sbjct: 184 YLKVLLTRKNSVTGIEYRNDPTIFAWELINEPRCTTDVSGKTLQDWIDEMTGFIKSIDDKHLLTVGLEGFYGPNSPKGLTVNPEQWASQLGTDFVQNSNSSNIDFASVHIYPDHWFHNQTFEEKLKFVVKWMQSHIEDGLKELKKPVLFTEFGLSNQNKDYEPSQRDKFYRIIFDVVYKSAKRKKSGAGTLVWQLFMEGMETFNDDFGIVPHEQDSIYKLMIEQSCRLGKV 414
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MANP_ARATH (Putative mannan endo-1,4-beta-mannosidase P OS=Arabidopsis thaliana GN=MANP PE=5 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.273e-46 Identity = 95/178 (53.37%), Postives = 116/178 (65.17%), Query Frame = 1 Query: 1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSE-KQQYNP--NFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSGAN--QRDQLFDTVYSAIY 519 H+KT+L R+NT T VAYKDEP MAW+LMNEPRC D SGKT+ WI EMA +VKS+D NHLL G EGFYG SS E K NP VG DFIAN+ I +IDFA++H D W S+++F+ WL HI+DAQ+ L+KP++LAEFG T RD +F T Y IY Sbjct: 156 HVKTMLNRVNTFTKVAYKDEPASMAWQLMNEPRCGVDRSGKTLMAWINEMALFVKSVDPNHLLSTGHEGFYGDSSPERKNSLNPVSANTVGADFIANHNIDAIDFASMHCGSDLWFQRLDQNSRLAFIKRWLEGHIEDAQNNLKKPVILAEFGLGSDTPRYTLANRDDVFTTTYDIIY 333 The following BLAST results are available for this feature:
BLAST of CX291514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291514 ID=CX291514; Name=CX291514; organism=Citrus clementina; type=EST; length=713bpback to top |