CX291517

Overview
NameCX291517
Unique NameCX291517
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_NOSP7 (Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.472e-60
Identity = 115/166 (69.28%), Postives = 133/166 (80.12%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L PS AG L++KEL YL  A  NP++P AAI+GGSKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G SVG SLVEEDKL+L  SL  KAK +GV+LLLPTDVV+AD FA DANS+ V    IPDGWMGLD+GPD +K F EAL  TKT+IWNGPMGVF
Sbjct:  161 GVTKFLSPSVAGYLVEKELQYLQNAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKAKERGVALLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKFFQEALADTKTVIWNGPMGVF 326          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.472e-60
Identity = 115/166 (69.28%), Postives = 133/166 (80.12%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L PS AG L++KEL YL  A  NP++P AAI+GGSKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G +VG SLVEEDKL+L  SL  KAK +GVSLLLPTDVV+AD FA DANS+ V    IPDGWMGLD+GPD +K F EAL  TKT+IWNGPMGVF
Sbjct:  161 GVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLELAKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIDNIPDGWMGLDIGPDSVKVFQEALADTKTVIWNGPMGVF 326          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 3.229e-60
Identity = 114/166 (68.67%), Postives = 133/166 (80.12%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L+PS AG LM+KEL YL GA   PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G +VG SLVEEDKL+L   L  KAK+KGV LLLPTDV++AD FA DANS+V   TAIPDGWMGLD+GPD IK F  AL   KT+IWNGPMGVF
Sbjct:  162 GVTKFLKPSVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLAVGKSLVEEDKLELAKELEAKAKAKGVELLLPTDVLLADNFAPDANSQVADVTAIPDGWMGLDIGPDAIKVFQAALADCKTVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_SYNPW (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH7803) GN=pgk PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 5.508e-60
Identity = 113/166 (68.07%), Postives = 133/166 (80.12%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L+P+ AG LM+KEL YL GA   PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD FA DANS+V   TAIPDGWMGLD+GPD +K F  AL   +T+IWNGPMGVF
Sbjct:  162 GVTKFLKPAVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVELLLPTDVVLADNFAPDANSQVADVTAIPDGWMGLDIGPDAVKVFQAALADCQTVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_SYNE7 (Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 5.508e-60
Identity = 114/166 (68.67%), Postives = 132/166 (79.52%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  + L P  AG L++KEL YL  A  NP++P AAIVGGSKVS+KIGVIE+LL+K D LL+GGGMIFTFYKAQG SVG SLVEEDKLDL  SLM KA+ KGV LLLP DVV+ADKFA DAN+K V   AIPDGWMGLD+GP+ +K F EAL   +++IWNGPMGVF
Sbjct:  162 GVTEYLSPCVAGYLLEKELQYLQAAIDNPQRPLAAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDLARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEEALADCRSVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_SYNR3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain RCC307) GN=pgk PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 7.193e-60
Identity = 114/166 (68.67%), Postives = 133/166 (80.12%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L PS AG LM+KEL YL GA  +PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD FA DANS+V    AIP+GWMGLD+GPD IK F +AL   KT+IWNGPMGVF
Sbjct:  162 GVTKYLSPSVAGYLMEKELQYLQGAVDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADNFAPDANSQVASIDAIPEGWMGLDIGPDSIKVFQDALGDCKTVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_SYNP6 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=pgk PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 7.193e-60
Identity = 115/172 (66.86%), Postives = 133/172 (77.33%), Query Frame = 3
Query:   81 AMLPLIGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            A  P  G  + L P  AG L++KEL YL  A  NP++P AAIVGGSKVS+KIGVIE+LL+K D LL+GGGMIFTFYKAQG SVG SLVEEDKLDL  SLM KA+ KGV LLLP DVV+ADKFA DAN+K V   AIPDGWMGLD+GP+ +K F  AL   +++IWNGPMGVF
Sbjct:  156 AHAPTAGVTEYLSPCVAGYLLEKELQYLQAAIDNPQRPLAAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDLARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEGALADCRSVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROM4 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=pgk PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 9.395e-60
Identity = 110/166 (66.27%), Postives = 136/166 (81.93%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L P+ AG LM+KEL YL GA  +PK+P AAIVGGSKVS+KIGV+ESL++K D +L+GGGMIFTFYKA+G SVG SLVE+DKL+L  +L EKAKSKGV LLLPTDVV+AD F+ DANS++    +IP+GWMGLD+GPD +K F +AL+  +T+IWNGPMGVF
Sbjct:  162 GVTKFLSPNVAGYLMEKELQYLQGAIDSPKRPLAAIVGGSKVSSKIGVLESLIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEDDKLELAKALEEKAKSKGVELLLPTDVVLADNFSPDANSQIAQINSIPEGWMGLDIGPDSVKLFQDALEDCQTVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.227e-59
Identity = 114/166 (68.67%), Postives = 132/166 (79.52%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L PS AG L++KEL YL  A  NP++P AAI+GGSKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G +VG SLVEEDKL+L  SL  KAK +GVSLLLPTDVV+AD FA DANS+ V    IPDGWMGLD+GPD +K F  AL  TKT+IWNGPMGVF
Sbjct:  161 GVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLELAKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKVFQAALADTKTVIWNGPMGVF 326          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_SYNSC (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9605) GN=pgk PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.733e-59
Identity = 112/166 (67.47%), Postives = 131/166 (78.92%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L+PS AG LM+KEL YL GA   PK+P AAIVGGSKVS+KIGV+++L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+ GV LLLPTDVV+AD FA DANS+     AIPDGWMGLD+GPD IK F EAL   +T+IWNGPMGVF
Sbjct:  162 GVTKFLKPSVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLDTLIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKANGVQLLLPTDVVLADNFAPDANSQTADINAIPDGWMGLDIGPDSIKVFQEALADCQTVIWNGPMGVF 327          
The following BLAST results are available for this feature:
BLAST of CX291517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_NOSP72.472e-6069.28Phosphoglycerate kinase OS=Nostoc punctiforme (str... [more]
PGK_ANAVT2.472e-6069.28Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGK_SYNS33.229e-6068.67Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNPW5.508e-6068.07Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNE75.508e-6068.67Phosphoglycerate kinase OS=Synechococcus elongatus... [more]
PGK_SYNR37.193e-6068.67Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNP67.193e-6066.86Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROM49.395e-6066.27Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_ANASP1.227e-5968.67Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]
PGK_SYNSC2.733e-5967.47Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionC03010B05SK OF2 Citrus clementina cDNA clone C03010B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291517 ID=CX291517; Name=CX291517; organism=Citrus clementina; type=EST; length=596bp
ACTCTCCTCACTATCTTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGA
AGAACGCTTTGACGATGTATGGGAAAGCCGGCGATGCTACCTCTGATTGG
AAGAAATAAGATCTTAAGGCCGTCTAAGGCTGGTATCCTGATGCAAAAGG
AACTANATTATCTTGTTGGAGCTGCTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTGTTATTGAATC
ACTTTTGGAGAAGGTTGACATTCTATTGCTCGGTGGAGGAATGATCTTTA
CCTTTTACAAGGCCCAAGGACACTCTGTTGGTTCATCCCTTGTTGAGGAA
GACAAGCTTGATCTCGGTACGTCACTTATGGAGAAGGCCAAATCTAAAGG
GGTGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAAGTTTGCTG
CTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAGATGGTTGG
ATGGGCTTGGATGTTGGACCTGATGACATCAAGTCATTCAGTGAAGCTTT
GGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGTGTTT
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