CX291517

Overview
NameCX291517
Unique NameCX291517
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.733e-59
Identity = 112/166 (67.47%), Postives = 134/166 (80.72%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L+PS AG L+QKEL YL GA S PK+PF AIVGGSKVS+KI VIE L+EK D +++GGGMIFTFYKA+G  VGSSLVEEDKL+L  +L   AK+KGV LLLP+DVV+ADKF A+AN++ V   AIPDGWMGLD+GPD IK+F +AL   KT++WNGPMGVF
Sbjct:  223 GVTKFLKPSVAGFLLQKELDYLDGAVSAPKRPFVAIVGGSKVSSKITVIEKLMEKCDKIIIGGGMIFTFYKARGLKVGSSLVEEDKLELAKNLEAIAKAKGVQLLLPSDVVVADKFDANANTQTVSVEAIPDGWMGLDIGPDSIKTFQDALADAKTVVWNGPMGVF 388          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROM3 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=pgk PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.357e-58
Identity = 112/166 (67.47%), Postives = 132/166 (79.52%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L PS AG LM+KEL YL GA  +PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD F+ DANS+ V   AIPDGWMGLD+GPD I  F +AL   +T+IWNGPMGVF
Sbjct:  162 GVTKFLNPSVAGHLMEKELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFSPDANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 3.947e-58
Identity = 113/166 (68.07%), Postives = 130/166 (78.31%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  + L P  AG LM+KEL YL  A  +P++P AAIVGGSKVS+KIGVIE+LLEKVD LL+GGGMIFTFYKA+G +VG SLVEEDKL+L   L  KA+ KGV LLLPTDVV+AD FA DANS+VV   AIPD WMGLD+GP  +K F EAL   KT+IWNGPMGVF
Sbjct:  161 GVTQYLSPCVAGFLMEKELEYLQNAIEHPRRPLAAIVGGSKVSSKIGVIEALLEKVDKLLIGGGMIFTFYKARGLNVGKSLVEEDKLELAKHLETKAQEKGVELLLPTDVVVADNFANDANSQVVSIEAIPDDWMGLDIGPASVKRFQEALQDCKTVIWNGPMGVF 326          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.155e-58
Identity = 112/166 (67.47%), Postives = 131/166 (78.92%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L PS AG LM+KEL YL GA  +PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G SVG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD FA  ANS+ V   AIPDGWMGLD+GPD I  F +AL   +T+IWNGPMGVF
Sbjct:  162 GVTKFLNPSVAGHLMEKELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFAPAANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_SYNY3 (Phosphoglycerate kinase OS=Synechocystis sp. (strain PCC 6803) GN=pgk PE=3 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 6.733e-58
Identity = 110/166 (66.27%), Postives = 129/166 (77.71%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    L P+ AG L++KEL +L GA   PK+P  AIVGGSKVS+KIGVIE+LL+K D L++GGGMIFTFYKAQG + G SLVEEDKLDL  SLM KAK KGV  LLPTDVV+AD FA DAN++ V   AIPDGWMGLD+GPD +K+F +AL    T+IWNGPMGVF
Sbjct:  162 GVTHFLSPNVAGYLIEKELQFLQGAIEAPKRPLVAIVGGSKVSSKIGVIETLLDKCDKLIIGGGMIFTFYKAQGLNTGKSLVEEDKLDLAKSLMAKAKEKGVEFLLPTDVVVADNFAPDANAQTVGVDAIPDGWMGLDIGPDSVKTFQDALAGCGTVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_ACAM1 (Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=pgk PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 6.733e-58
Identity = 110/161 (68.32%), Postives = 130/161 (80.75%), Query Frame = 3
Query:  114 LRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            L PS AG L++KEL YL  A   P++P AAIVGGSKVS+KIGVIE+LL+KVD LL+GGGMIFTFYKA+G +VG SLVEEDKLDL  +L  KAK KGV+LLLP+DVV+AD FAADAN++ V    IPDGWMGLD+GP+ +K F  AL   KT+IWNGPMGVF
Sbjct:  167 LSPSVAGYLIEKELKYLQAAIEGPQRPLAAIVGGSKVSSKIGVIETLLDKVDKLLIGGGMIFTFYKARGLAVGKSLVEEDKLDLARTLEAKAKEKGVALLLPSDVVVADNFAADANAQTVSINNIPDGWMGLDIGPNSVKEFQAALSDCKTVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_TRIEI (Phosphoglycerate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pgk PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.148e-57
Identity = 110/166 (66.27%), Postives = 133/166 (80.12%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L PS AG L+++EL +L GA  +P+KP AAI+GGSKVS+KIGVIE+LL+K D LLLGGGMIFTFYKA+G SVG SLVEEDK++L  SL  KAK KGV++LLPTDVV+ADKF  +AN++ V   AIPDGWMGLD+GP+  K F +AL   KT+IWNGPMGVF
Sbjct:  161 GVTKYLSPSVAGYLIEQELKFLQGAIDSPQKPLAAIIGGSKVSSKIGVIEALLDKCDKLLLGGGMIFTFYKARGLSVGKSLVEEDKIELAKSLEAKAKEKGVTMLLPTDVVVADKFDPEANTQTVSIEAIPDGWMGLDIGPESAKVFQDALADCKTVIWNGPMGVF 326          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_SYNJA (Phosphoglycerate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pgk PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.148e-57
Identity = 109/166 (65.66%), Postives = 131/166 (78.92%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    L+P+ AG L++KEL +L GA  NP++P AAI+GGSKVSTKIGVIE LLEKVD LLLGGGMIFTFY+AQG   G SLVE DKLDL  SLMEKAK++GV LLLP DVV+AD+F  DAN++ V   AIP+ WMGLD+GP+ +K+F  AL   KT++WNGPMGVF
Sbjct:  173 GVTAYLQPAVAGYLVEKELQFLSGAIENPQRPLAAIIGGSKVSTKIGVIERLLEKVDKLLLGGGMIFTFYQAQGIPTGKSLVETDKLDLARSLMEKAKARGVELLLPVDVVVADRFDKDANAQTVSIHAIPEDWMGLDIGPESVKAFQAALQGCKTVVWNGPMGVF 338          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.558e-57
Identity = 111/166 (66.87%), Postives = 128/166 (77.11%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    L PS AG L++KEL YL  A  NP++P AAI+GGSKVS+KIGVIE+LLEK D LL+GGGMIFTFYKA+G SVG SLVEEDKL+L  SL  KA  KGV LLLPTDVV+AD F A+AN K V    IPDGWMGLD+GPD +K F +AL   K++IWNGPMGVF
Sbjct:  162 GVTHYLSPSVAGYLIEKELNYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKASEKGVQLLLPTDVVVADAFDANANDKTVKIEEIPDGWMGLDIGPDSVKLFQDALADCKSVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.700e-57
Identity = 109/166 (65.66%), Postives = 128/166 (77.11%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    L PS AG L++KEL YL  A   P++P AAI+GGSKVS+KIGVIE+LLEK D LL+GGGMIFTFYKA+G SVG SLVEEDKL+L  SL  KAK KGV  LLPTDVV+ADKF  DA S++V    IPDGWMGLD+GP+ +K F EAL   K+++WNGPMGVF
Sbjct:  163 GVTHYLSPSVAGYLIEKELNYLQAAIETPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKAKEKGVEFLLPTDVVLADKFDKDAESQIVKVENIPDGWMGLDIGPESVKVFQEALSNCKSVLWNGPMGVF 328          
The following BLAST results are available for this feature:
BLAST of CX291517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKH_VOLCA2.733e-5967.47Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGK_PROM31.357e-5867.47Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_THEEB3.947e-5868.07Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_PROMM5.155e-5867.47Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNY36.733e-5866.27Phosphoglycerate kinase OS=Synechocystis sp. (stra... [more]
PGK_ACAM16.733e-5868.32Phosphoglycerate kinase OS=Acaryochloris marina (s... [more]
PGK_TRIEI1.148e-5766.27Phosphoglycerate kinase OS=Trichodesmium erythraeu... [more]
PGK_SYNJA1.148e-5765.66Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_CYAP72.558e-5766.87Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_MICAN5.700e-5765.66Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]

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Properties
Property NameValue
Genbank descriptionC03010B05SK OF2 Citrus clementina cDNA clone C03010B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291517 ID=CX291517; Name=CX291517; organism=Citrus clementina; type=EST; length=596bp
ACTCTCCTCACTATCTTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGA
AGAACGCTTTGACGATGTATGGGAAAGCCGGCGATGCTACCTCTGATTGG
AAGAAATAAGATCTTAAGGCCGTCTAAGGCTGGTATCCTGATGCAAAAGG
AACTANATTATCTTGTTGGAGCTGCTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTGTTATTGAATC
ACTTTTGGAGAAGGTTGACATTCTATTGCTCGGTGGAGGAATGATCTTTA
CCTTTTACAAGGCCCAAGGACACTCTGTTGGTTCATCCCTTGTTGAGGAA
GACAAGCTTGATCTCGGTACGTCACTTATGGAGAAGGCCAAATCTAAAGG
GGTGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAAGTTTGCTG
CTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAGATGGTTGG
ATGGGCTTGGATGTTGGACCTGATGACATCAAGTCATTCAGTGAAGCTTT
GGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGTGTTT
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