CX291517

Overview
NameCX291517
Unique NameCX291517
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROMA (Phosphoglycerate kinase OS=Prochlorococcus marinus GN=pgk PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.694e-56
Identity = 106/166 (63.86%), Postives = 133/166 (80.12%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    L PS AG LM+KEL YL GA  +P++P AAIVGGSKVS+KIGV+ESL++K D +L+GGGMIFTFYKA+G SVG SLVE+DKLDL  +L +KAK KGV LLLP+DVV+AD F+ DA+S++V   +IP+GWMGLD+G + +K F +AL   KT+IWNGPMGVF
Sbjct:  162 GVTNYLSPSVAGYLMEKELKYLQGAIDSPQRPLAAIVGGSKVSSKIGVLESLIDKCDKVLIGGGMIFTFYKARGLSVGKSLVEDDKLDLARALEKKAKEKGVQLLLPSDVVLADNFSPDASSQMVQIDSIPEGWMGLDIGKESVKLFQDALADCKTVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROM9 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=pgk PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 6.302e-56
Identity = 108/166 (65.06%), Postives = 128/166 (77.11%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    L PS AG L++KEL YL GA  +PK+P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD+F+ DANSK+    +I   WMGLD+GPD IK F  AL   KTIIWNGPMGVF
Sbjct:  162 GVTNYLSPSVAGFLLEKELKYLQGAIDSPKRPLAAIVGGSKVSSKIGVLDSLLDKCDKIMIGGGMIFTFYKARGLDVGKSLVEEDKLELAKDLEAKAKAKGVELLLPTDVVLADEFSPDANSKISQIDSISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 8.230e-56
Identity = 109/158 (68.99%), Postives = 126/158 (79.75%), Query Frame = 3
Query:  123 SKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            S AG+L++KEL +L GA   PK+P  AIVGGSKVS+KIGVIE+LLEK D LL+GGGMIFTFYKAQG SVG SLVE+DK+DL  SLMEKA+ K   +LLPTDV++ADKFA DA +K V   AIPDGWMGLD+G D +K F EALD   T IWNGPMGVF
Sbjct:  170 SVAGLLIEKELQFLKGAIEAPKRPLVAIVGGSKVSSKIGVIETLLEKCDKLLIGGGMIFTFYKAQGKSVGGSLVEDDKIDLAKSLMEKAQGK---ILLPTDVIVADKFAPDAEAKTVSVDAIPDGWMGLDIGADSVKVFQEALDGCGTAIWNGPMGVF 324          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_SYNJB (Phosphoglycerate kinase OS=Synechococcus sp. GN=pgk PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 8.230e-56
Identity = 105/166 (63.25%), Postives = 129/166 (77.71%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    L+P+ AG L+++EL +L GA  +P++P AAI+GGSKVSTKIGVIE LLEKVD LLLGGGMIFTFY+AQG   G SLVE DKLDL  SLMEKAK +GV LLLP DVV+AD+F  DA ++ V   AIP+ WMGLD+GP+ +K+F  AL   +T++WNGPMGVF
Sbjct:  173 GVTAYLQPAVAGYLVERELQFLSGAIEDPRRPLAAIIGGSKVSTKIGVIERLLEKVDKLLLGGGMIFTFYQAQGIQTGKSLVETDKLDLARSLMEKAKERGVELLLPVDVVVADRFDKDAQAQTVSIHAIPEDWMGLDIGPESVKAFQSALQGCQTVVWNGPMGVF 338          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROMS (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain AS9601) GN=pgk PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 8.230e-56
Identity = 108/166 (65.06%), Postives = 127/166 (76.51%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    L PS AG L++KEL YL GA  +P +P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+AD+F+ DANSK+    AI   WMGLD+GPD IK F  AL   KTIIWNGPMGVF
Sbjct:  162 GVTNYLSPSVAGFLLEKELKYLQGAVDSPNRPLAAIVGGSKVSSKIGVLDSLLDKCDKIMIGGGMIFTFYKARGLDVGKSLVEEDKLELAKDLEAKAKAKGVELLLPTDVVLADEFSPDANSKISQIDAISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROM1 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=pgk PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.075e-55
Identity = 106/166 (63.86%), Postives = 129/166 (77.71%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L P  AG LM+KEL YL GA   PK P AAIVGGSKVS+KIGV+ESL++K D +++GGGMIFTFYKA+G SVG+SLVEEDKL+L ++L +KAK KGV  LLPTDVV+AD F+ DANSK+    AI +GWMGLD+G + ++ F  AL   KT+IWNGPMGVF
Sbjct:  162 GVTKFLSPCVAGYLMEKELKYLQGAIDQPKSPLAAIVGGSKVSSKIGVLESLIDKCDKIIVGGGMIFTFYKARGLSVGNSLVEEDKLELASALEKKAKEKGVEFLLPTDVVLADNFSPDANSKLSKVDAISEGWMGLDIGSESVELFQNALKDCKTVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROM2 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=pgk PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.834e-55
Identity = 108/166 (65.06%), Postives = 127/166 (76.51%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    L PS AG L++KEL YL GA  +PK+P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL L   L  KAK+KGV LLLPTDVV+AD+F+ DANSK+    +I   WMGLD+GPD IK F  AL   KTIIWNGPMGVF
Sbjct:  162 GVTNYLSPSVAGFLLEKELKYLQGAIDSPKRPLAAIVGGSKVSSKIGVLDSLLDKCDKIMIGGGMIFTFYKARGLDVGKSLVEEDKLKLAKDLEAKAKAKGVELLLPTDVVLADEFSPDANSKISRIDSISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CYAP8 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 8801) GN=pgk PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.395e-55
Identity = 106/166 (63.86%), Postives = 127/166 (76.51%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    L P+ AG L++KEL YL  A  NP++P  AI+GGSKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G +VG SLVE+DKL+L  SL  KAK KGV  LLPTDVV+AD FA DAN+K V   AI DGWMGLD+GP+ +K F  AL   K++IWNGPMGVF
Sbjct:  161 GVTHYLSPNVAGYLIEKELNYLQAAIENPQRPLVAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEDDKLELAKSLEAKAKEKGVDFLLPTDVVLADNFAPDANAKTVSIDAIEDGWMGLDIGPESVKVFQAALADCKSVIWNGPMGVF 326          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROMT (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=pgk PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 9.100e-55
Identity = 104/166 (62.65%), Postives = 129/166 (77.71%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L P  AG LM+KEL YL GA   P+ P AAIVGGSKVS+KIGV+ESL++K D +++GGGMIFTFYKA+G SVG+SLVEEDKL+L ++L +KA+ KGV  LLPTDVV+AD F+ DANSK+    AI +GWMGLD+G + ++ F  AL   KT+IWNGPMGVF
Sbjct:  162 GVTKFLSPCVAGYLMEKELKYLQGAIDQPQSPLAAIVGGSKVSSKIGVLESLIDKCDKIIVGGGMIFTFYKARGLSVGNSLVEEDKLELASALEKKAQEKGVEFLLPTDVVLADNFSPDANSKLSKVDAISEGWMGLDIGSESVELFQNALKDCKTVIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROM0 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=pgk PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.458e-54
Identity = 105/166 (63.25%), Postives = 126/166 (75.90%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    L PS AG L++KEL YL GA  +P +P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L   L  KAK+KGV LLLPTDVV+A++F+ DA SK+    +I   WMGLD+GPD IK F  AL   KTIIWNGPMGVF
Sbjct:  162 GVTNYLSPSVAGFLLEKELKYLQGAVDSPNRPLAAIVGGSKVSSKIGVLDSLLDKCDKIMIGGGMIFTFYKARGLDVGKSLVEEDKLELAKDLEAKAKAKGVELLLPTDVVLANEFSPDAESKISQIDSISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVF 327          
The following BLAST results are available for this feature:
BLAST of CX291517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROMA3.694e-5663.86Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM96.302e-5665.06Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNP28.230e-5668.99Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNJB8.230e-5663.25Phosphoglycerate kinase OS=Synechococcus sp. GN=pg... [more]
PGK_PROMS8.230e-5665.06Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM11.075e-5563.86Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM21.834e-5565.06Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_CYAP82.395e-5563.86Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_PROMT9.100e-5562.65Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM03.458e-5463.25Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionC03010B05SK OF2 Citrus clementina cDNA clone C03010B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291517 ID=CX291517; Name=CX291517; organism=Citrus clementina; type=EST; length=596bp
ACTCTCCTCACTATCTTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGA
AGAACGCTTTGACGATGTATGGGAAAGCCGGCGATGCTACCTCTGATTGG
AAGAAATAAGATCTTAAGGCCGTCTAAGGCTGGTATCCTGATGCAAAAGG
AACTANATTATCTTGTTGGAGCTGCTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTGTTATTGAATC
ACTTTTGGAGAAGGTTGACATTCTATTGCTCGGTGGAGGAATGATCTTTA
CCTTTTACAAGGCCCAAGGACACTCTGTTGGTTCATCCCTTGTTGAGGAA
GACAAGCTTGATCTCGGTACGTCACTTATGGAGAAGGCCAAATCTAAAGG
GGTGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAAGTTTGCTG
CTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAGATGGTTGG
ATGGGCTTGGATGTTGGACCTGATGACATCAAGTCATTCAGTGAAGCTTT
GGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGTGTTT
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