CX291517

Overview
NameCX291517
Unique NameCX291517
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROMP (Phosphoglycerate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=pgk PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.006e-53
Identity = 105/166 (63.25%), Postives = 127/166 (76.51%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L P+ AG L++KEL YL GA   PK+P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L  +L  KAK+KGV LLLP+DV++A++F+ DA SKV    AI   WMGLD+GP  IK F  AL   KTIIWNGPMGVF
Sbjct:  162 GVTKFLEPAVAGFLLEKELKYLQGAIDAPKRPLAAIVGGSKVSSKIGVLDSLLDKCDKIIIGGGMIFTFYKARGLDVGKSLVEEDKLELARNLEAKAKNKGVELLLPSDVLLANEFSPDAESKVSQIDAISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PROM5 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=pgk PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.241e-53
Identity = 105/166 (63.25%), Postives = 126/166 (75.90%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  K L PS AG L++KEL YL GA   P +P AAIVGGSKVS+KIGV++SLL+K D +++GGGMIFTFYKA+G  VG SLVEEDKL+L  +L EKAK+KGV LLLP+DVV+A++F+  A SKV    +I   WMGLD+GP  IK F  AL   KTIIWNGPMGVF
Sbjct:  162 GVTKFLEPSVAGFLLEKELKYLQGAIDAPNRPLAAIVGGSKVSSKIGVLDSLLDKCDKIIIGGGMIFTFYKARGLDVGKSLVEEDKLELARNLEEKAKTKGVELLLPSDVVLANEFSPTAESKVSQIDSISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_BREBN (Phosphoglycerate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pgk PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.230e-51
Identity = 93/159 (58.49%), Postives = 125/159 (78.62%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG+LM+KE+ ++ GA SNP++PF AIVGG+KV  KI VIE+LL KVD L++GGGM  TF KAQG+ +G+SL E+DKLDL  +LME+AK +GV LL+P DVV+AD+FAADA  +VV   AIP+GWM LD+GP  ++ +   +  +KT++WNGPMGVF
Sbjct:  164 PAVAGLLMEKEIRFMGGALSNPERPFTAIVGGAKVKDKIAVIENLLTKVDHLIIGGGMANTFLKAQGYGIGASLCEDDKLDLARTLMEQAKERGVQLLMPVDVVVADRFAADAEKQVVAIDAIPEGWMALDIGPKTVEQYHSVIVDSKTVVWNGPMGVF 322          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CHLT3 (Phosphoglycerate kinase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=pgk PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.748e-50
Identity = 94/166 (56.63%), Postives = 123/166 (74.10%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    +  S AG L+ KEL YL  A +NP +PF AI+GG+K+S KI V+E+LL KVD +L+GG M+FTF+KAQG+++G SLVE+DKL+L  S++EKAK+ GV  LLPTDVV+ADKF  DAN+K+    +I D WMGLD+GP+    F E +   KT+IWNGPMGVF
Sbjct:  158 GVTNYVAESVAGYLIGKELTYLGEATANPVRPFVAILGGAKISGKIDVLENLLGKVDTVLVGGAMVFTFFKAQGYNIGKSLVEDDKLELAKSILEKAKTSGVKFLLPTDVVLADKFDQDANTKIATIDSIEDDWMGLDIGPETANCFREEVVNAKTVIWNGPMGVF 323          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_BACLD (Phosphoglycerate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pgk PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.503e-49
Identity = 89/159 (55.97%), Postives = 122/159 (76.73%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KEL  L  A SNP++PF AI+GG+KV  KIGVIESLLEKVD L++GGG+ +TF KA GH VG SL+EEDK++L  S M++AK KGV+  +PTDV++AD F+ DAN+K+VP + IP  W  LD+G +  K++++ +  +K ++WNGPMGVF
Sbjct:  164 PAVAGFLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIESLLEKVDNLIIGGGLAYTFVKALGHEVGKSLLEEDKIELAKSFMDRAKEKGVNFYMPTDVLVADDFSNDANTKIVPVSEIPSDWEALDIGEETRKTYADVIKNSKLVVWNGPMGVF 322          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_BACST (Phosphoglycerate kinase OS=Bacillus stearothermophilus GN=pgk PE=1 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 4.374e-49
Identity = 92/159 (57.86%), Postives = 118/159 (74.21%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KEL  L  A SNP +PF AI+GG+KV  KIGVI++LLEKVD L++GGG+ +TF KA GH VG SL+EEDK++L  S MEKAK KGV   +P DVV+AD+FA DAN+KVVP  AIP  W  LD+GP   + + + +  +K ++WNGPMGVF
Sbjct:  164 PAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELYRDVIRESKLVVWNGPMGVF 322          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_ROSCS (Phosphoglycerate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pgk PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 9.745e-49
Identity = 92/159 (57.86%), Postives = 117/159 (73.58%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+ EL  L GA  NP +PF  I+GG+K+S KIGVIE+LL KVD LL+GGGM  TF  AQGH +G SLVE D   +  SL+++A  +GV L+LPTDVVIAD F+ADAN KVVP   IP GW  LD+GP+ I++++E +   +T+IWNGPMGVF
Sbjct:  166 PAVAGFLMEAELAALQGALENPARPFVTIIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAQGHEMGDSLVEPDSAPIAKSLLDQAAQRGVRLMLPTDVVIADAFSADANRKVVPVGEIPPGWRALDIGPETIRAYTEVITGAQTVIWNGPMGVF 324          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_GEOKA (Phosphoglycerate kinase OS=Geobacillus kaustophilus GN=pgk PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.835e-48
Identity = 91/159 (57.23%), Postives = 117/159 (73.58%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KEL  L  A SNP +PF AI+GG+KV  KIGVI++LLEKVD L++GGG+ +TF KA GH VG SL+EEDK++L  S MEKAK KGV   +P DVV+AD+FA DAN+KVV   AIP  W  LD+GP   + + + +  +K ++WNGPMGVF
Sbjct:  164 PAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVAIDAIPSDWEALDIGPKTRELYRDVIRQSKLVVWNGPMGVF 322          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_GEOSW (Phosphoglycerate kinase OS=Geobacillus sp. (strain WCH70) GN=pgk PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.249e-48
Identity = 89/159 (55.97%), Postives = 117/159 (73.58%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KE+  L  A SNP +PF AI+GG+KV  KIGVIE+LL KVD L++GGG+ +TF KA GH +G SL+EEDK++L  S MEKAK KGV+  +P DVV+AD+FA DAN+KVV   AIP  W  LD+GP   + + + +  +K ++WNGPMGVF
Sbjct:  164 PAVAGFLMEKEIEVLGKALSNPDRPFTAIIGGAKVKDKIGVIENLLNKVDNLIIGGGLAYTFVKALGHEIGKSLLEEDKIELAKSFMEKAKEKGVNFYMPVDVVVADRFANDANTKVVSIDAIPSDWEALDIGPKTRELYRDVIMKSKLVVWNGPMGVF 322          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_BACSK (Phosphoglycerate kinase OS=Bacillus clausii (strain KSM-K16) GN=pgk PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.838e-47
Identity = 89/159 (55.97%), Postives = 115/159 (72.33%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            PS AG LM+KEL  L  A SNP++PF A++GG+KV  KIGVI++LL+KVD L++GGG+ +TF KAQG+ VG SL+EEDKLDL    MEKA+ KGV   +P DV++AD F+ DAN K V  + IP  W  LD+GP   K++   L  +K +IWNGPMGVF
Sbjct:  164 PSAAGFLMEKELDVLGKALSNPERPFTAVIGGAKVKDKIGVIDNLLDKVDNLIIGGGLAYTFVKAQGYEVGKSLLEEDKLDLAKQFMEKAEQKGVKFYMPEDVIVADDFSDDANKKEVAISGIPADWEALDIGPKTRKTYEAVLKASKLVIWNGPMGVF 322          
The following BLAST results are available for this feature:
BLAST of CX291517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROMP1.006e-5363.25Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM52.241e-5363.25Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_BREBN1.230e-5158.49Phosphoglycerate kinase OS=Brevibacillus brevis (s... [more]
PGK_CHLT36.748e-5056.63Phosphoglycerate kinase OS=Chloroherpeton thalassi... [more]
PGK_BACLD1.503e-4955.97Phosphoglycerate kinase OS=Bacillus licheniformis ... [more]
PGK_BACST4.374e-4957.86Phosphoglycerate kinase OS=Bacillus stearothermoph... [more]
PGK_ROSCS9.745e-4957.86Phosphoglycerate kinase OS=Roseiflexus castenholzi... [more]
PGK_GEOKA2.835e-4857.23Phosphoglycerate kinase OS=Geobacillus kaustophilu... [more]
PGK_GEOSW8.249e-4855.97Phosphoglycerate kinase OS=Geobacillus sp. (strain... [more]
PGK_BACSK1.838e-4755.97Phosphoglycerate kinase OS=Bacillus clausii (strai... [more]

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Properties
Property NameValue
Genbank descriptionC03010B05SK OF2 Citrus clementina cDNA clone C03010B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291517 ID=CX291517; Name=CX291517; organism=Citrus clementina; type=EST; length=596bp
ACTCTCCTCACTATCTTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGA
AGAACGCTTTGACGATGTATGGGAAAGCCGGCGATGCTACCTCTGATTGG
AAGAAATAAGATCTTAAGGCCGTCTAAGGCTGGTATCCTGATGCAAAAGG
AACTANATTATCTTGTTGGAGCTGCTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTGTTATTGAATC
ACTTTTGGAGAAGGTTGACATTCTATTGCTCGGTGGAGGAATGATCTTTA
CCTTTTACAAGGCCCAAGGACACTCTGTTGGTTCATCCCTTGTTGAGGAA
GACAAGCTTGATCTCGGTACGTCACTTATGGAGAAGGCCAAATCTAAAGG
GGTGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAAGTTTGCTG
CTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAGATGGTTGG
ATGGGCTTGGATGTTGGACCTGATGACATCAAGTCATTCAGTGAAGCTTT
GGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGTGTTT
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