CX291517

Overview
NameCX291517
Unique NameCX291517
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_ROSS1 (Phosphoglycerate kinase OS=Roseiflexus sp. (strain RS-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.400e-47
Identity = 90/159 (56.60%), Postives = 117/159 (73.58%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+ EL  L GA  NP +PF  I+GG+K+S KIGVIE+LL KVD LL+GGGM  TF  AQG+ +G SLVE D + +   L+EKA S+GV  +LPTDVVIAD F+ADAN +VV    IP GW  LD+GP+ +++++E + T +T+IWNGPMGVF
Sbjct:  166 PAVAGFLMEAELAALQGALENPTRPFVTIIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAQGYEMGDSLVEPDSVPVAKDLLEKAASRGVRFMLPTDVVIADAFSADANRRVVSVGDIPPGWRVLDIGPETVRAYTEIITTAQTVIWNGPMGVF 324          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.135e-47
Identity = 89/159 (55.97%), Postives = 115/159 (72.33%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KE+  L  A SNP +PF AI+GG+KV  KIGVIE+LL+KVD L++GGG+ +TF KA GH +G SL+EEDK+DL  S MEKAK KGV+  +P D V+AD F+ DAN KVV    IP  W GLD+GP   + + + +  +K +IWNGPMGVF
Sbjct:  164 PAVAGFLMEKEIEVLGKALSNPDRPFTAIIGGAKVKDKIGVIENLLDKVDNLIIGGGLAYTFVKALGHEIGKSLLEEDKIDLAKSFMEKAKEKGVNFYMPVDAVVADDFSNDANKKVVNIDEIPSDWEGLDIGPKTRELYRDVILKSKLVIWNGPMGVF 322          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOTE (Phosphoglycerate kinase OS=Clostridium tetani GN=pgk PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.094e-47
Identity = 89/167 (53.29%), Postives = 122/167 (73.05%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G  + +  S  G L+QKEL +L  A  NP++PF +I+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG+++GSSL+EEDK+D    ++EKAK KGV LLLP D V A+KFA DA + +     I +G+MGLD+GP   K +S+ + + KT++WNGPMGVF
Sbjct:  164 VGVTEFVATSVCGYLIQKELKFLGNAVENPQRPFISILGGAKVSDKINVINNLLEKVDTLIIGGGMSYTFQKAQGYTIGSSLLEEDKIDYAKEMIEKAKEKGVKLLLPVDNVAAEKFAEDAEAIITEDQNIKEGYMGLDIGPKTSKLYSQEVQSAKTVVWNGPMGVF 330          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.094e-47
Identity = 87/159 (54.72%), Postives = 119/159 (74.84%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ +G LMQKEL  L  A SNP +PF AI+GG+KV  KIGVIESLL+KVD L++GGG+ +TF KA GH VG SL+EEDK+DL  S M++AK KGV+ L+PTDV++AD F+ DAN+ +VP + IP     LD+G +  + +++ +  +K ++WNGPMGVF
Sbjct:  164 PAVSGFLMQKELEVLGKAISNPDRPFTAIIGGAKVKDKIGVIESLLDKVDNLIIGGGLAYTFVKALGHEVGKSLLEEDKVDLAKSFMDRAKEKGVNFLIPTDVLVADDFSNDANTSIVPISEIPSDLEALDIGTETREKYADVIKNSKLVVWNGPMGVF 322          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_DEIRA (Phosphoglycerate kinase OS=Deinococcus radiodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.121e-47
Identity = 94/159 (59.12%), Postives = 117/159 (73.58%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P  AG L+Q E+  L      P+ P+  I+GG+KVS KI VIE+LL KVD +L+GGGM+FTF KA+G  +G+SLVE+D+LDL   L+EK   K   LLLPTD V ADKFAADA SKVVPA  IPDGWMGLD+GPD  +++++AL   KT+ WNGPMGVF
Sbjct:  185 PHAAGGLLQSEVDALGKLLHAPEHPYVVIIGGAKVSDKIKVIENLLPKVDRMLIGGGMMFTFIKARGGQIGNSLVEDDQLDLAKGLLEKYGDK---LLLPTDAVAADKFAADAQSKVVPADQIPDGWMGLDIGPDTQRAYADALQGAKTVFWNGPMGVF 340          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_BACHD (Phosphoglycerate kinase OS=Bacillus halodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.191e-46
Identity = 86/156 (55.13%), Postives = 115/156 (73.72%), Query Frame = 3
Query:  129 AGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            AG+LM+KEL  L  A SNP++PF AI+GG+KV  KIGVIE+LL+KVD L++GGG+ +TF KAQGH +G SL+E DK+DL  S MEKAK KGV+  +P D ++AD F+ DAN+K V    IP  W  LD+GP   +++   + ++K +IWNGPMGVF
Sbjct:  167 AGLLMEKELEVLGKALSNPERPFTAIIGGAKVKDKIGVIENLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEADKMDLALSFMEKAKEKGVNFYVPQDAIVADDFSNDANTKAVDIDQIPADWEALDIGPKTRETYRNVIQSSKLVIWNGPMGVF 322          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOBL (Phosphoglycerate kinase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pgk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.556e-46
Identity = 88/167 (52.69%), Postives = 123/167 (73.65%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G    L+ +  G L+QKEL +L  A   P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVF
Sbjct:  161 VGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOBK (Phosphoglycerate kinase OS=Clostridium botulinum (strain Okra / Type B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.556e-46
Identity = 88/167 (52.69%), Postives = 123/167 (73.65%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G    L+ +  G L+QKEL +L  A   P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVF
Sbjct:  161 VGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOBJ (Phosphoglycerate kinase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=pgk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.556e-46
Identity = 88/167 (52.69%), Postives = 123/167 (73.65%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G    L+ +  G L+QKEL +L  A   P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVF
Sbjct:  161 VGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOB6 (Phosphoglycerate kinase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=pgk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.556e-46
Identity = 88/167 (52.69%), Postives = 123/167 (73.65%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G    L+ +  G L+QKEL +L  A   P++PF AI+GG+KVS KI VI +LL+KVD L++GGGM +TF KAQG+++G+SLVEEDK++    +++KAK KGV+LLLP D V+ADKF  DA+  V     I +G+MGLD+GP   K +S+A+ + KT++WNGPMGVF
Sbjct:  161 VGVTNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLIIGGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDASPVVTEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVF 327          
The following BLAST results are available for this feature:
BLAST of CX291517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_ROSS12.400e-4756.60Phosphoglycerate kinase OS=Roseiflexus sp. (strain... [more]
PGK_ANOFW3.135e-4755.97Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK_CLOTE4.094e-4753.29Phosphoglycerate kinase OS=Clostridium tetani GN=p... [more]
PGK_BACP24.094e-4754.72Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_DEIRA9.121e-4759.12Phosphoglycerate kinase OS=Deinococcus radiodurans... [more]
PGK_BACHD1.191e-4655.13Phosphoglycerate kinase OS=Bacillus halodurans GN=... [more]
PGK_CLOBL1.556e-4652.69Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBK1.556e-4652.69Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOBJ1.556e-4652.69Phosphoglycerate kinase OS=Clostridium botulinum (... [more]
PGK_CLOB61.556e-4652.69Phosphoglycerate kinase OS=Clostridium botulinum (... [more]

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Properties
Property NameValue
Genbank descriptionC03010B05SK OF2 Citrus clementina cDNA clone C03010B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291517 ID=CX291517; Name=CX291517; organism=Citrus clementina; type=EST; length=596bp
ACTCTCCTCACTATCTTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGA
AGAACGCTTTGACGATGTATGGGAAAGCCGGCGATGCTACCTCTGATTGG
AAGAAATAAGATCTTAAGGCCGTCTAAGGCTGGTATCCTGATGCAAAAGG
AACTANATTATCTTGTTGGAGCTGCTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTGTTATTGAATC
ACTTTTGGAGAAGGTTGACATTCTATTGCTCGGTGGAGGAATGATCTTTA
CCTTTTACAAGGCCCAAGGACACTCTGTTGGTTCATCCCTTGTTGAGGAA
GACAAGCTTGATCTCGGTACGTCACTTATGGAGAAGGCCAAATCTAAAGG
GGTGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAAGTTTGCTG
CTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAGATGGTTGG
ATGGGCTTGGATGTTGGACCTGATGACATCAAGTCATTCAGTGAAGCTTT
GGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGTGTTT
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