CX291517

Overview
NameCX291517
Unique NameCX291517
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CHLTE (Phosphoglycerate kinase OS=Chlorobium tepidum GN=pgk PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.912e-46
Identity = 90/166 (54.22%), Postives = 126/166 (75.90%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    ++ + AG L++KEL YL  A ++ ++PF AI+GG+K+S KI V+ESL EKVD +L+GG M+FTF+KAQG  VG+SLVEE+KL+L  SL+EKAK+K V LLLP DVV+A + +ADA S+V P +AI  G +GLD+GP  I+++ + +   KT++WNGPMGVF
Sbjct:  159 GITHFMQTAVAGYLIEKELRYLGTALNDAQRPFVAILGGAKISGKIDVLESLFEKVDTVLVGGAMVFTFFKAQGLDVGNSLVEENKLELAVSLLEKAKAKNVRLLLPEDVVVAGEISADAPSRVEPVSAISAGMIGLDIGPATIETYRKEILDAKTVLWNGPMGVF 324          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_ACIC5 (Phosphoglycerate kinase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=pgk PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.912e-46
Identity = 92/167 (55.09%), Postives = 117/167 (70.06%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    ++ S AG+LM+KEL YL  A   P KPF AI+GG+KVS KI VI++LL KVD LL+GGGM +TF K+QG  VG SLVE DKLD+  + ++KAK KGV  LLP D ++ADKFAADA ++    T A P  WM LD+GP  I+ F++ +    TI+WNGPMGVF
Sbjct:  166 GITHFVKQSAAGLLMEKELEYLGKALEAPAKPFVAIIGGAKVSDKIKVIDNLLNKVDALLIGGGMAYTFLKSQGQDVGKSLVEADKLDIAKAALDKAKEKGVRFLLPVDHILADKFAADAATQTFEGTGAFPAEWMALDIGPKSIELFTKEIAAADTIVWNGPMGVF 332          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CHLAD (Phosphoglycerate kinase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pgk PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.721e-46
Identity = 88/159 (55.35%), Postives = 117/159 (73.58%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KEL Y+ GA SNP++PF  ++GG+K+S KIGVIE+LL KVD LL+GGGM  TF  A+G ++G SLVE + + +   LM KA+ +G  LLLP DVVIAD F+A+A  +VV  TAIP GW  LD+GP  I+ +S  + + +T+IWNGPMGVF
Sbjct:  167 PAVAGFLMEKELTYIGGALSNPQRPFVTVIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAKGLNLGDSLVEPESVPVAQQLMAKAEERGARLLLPVDVVIADAFSAEAQRQVVEVTAIPSGWRVLDIGPKTIELYSAEIRSARTVIWNGPMGVF 325          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CHLP8 (Phosphoglycerate kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=pgk PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.247e-45
Identity = 87/156 (55.77%), Postives = 121/156 (77.56%), Query Frame = 3
Query:  129 AGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            AG L++KEL YL  A ++ K+PF AI+GG+K+S KI V+E L +KVD +L+GG M+FTF+KAQG  VG+SLVE++K++L  SL+EKAK KGV L+LP DVV+A + +ADA S+V P T I DG  GLD+GP  I+++++ +   KT++WNGPMGVF
Sbjct:  169 AGYLIEKELRYLGTALNDAKRPFVAILGGAKISGKIDVLEHLFDKVDTVLVGGAMVFTFFKAQGLPVGNSLVEDNKIELAISLLEKAKEKGVRLILPEDVVVAAEISADAASRVEPVTTISDGMSGLDIGPATIETYAKEILGAKTVLWNGPMGVF 324          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOD6 (Phosphoglycerate kinase OS=Clostridium difficile (strain 630) GN=pgk PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.934e-45
Identity = 88/167 (52.69%), Postives = 120/167 (71.86%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G  + L+    G L+QKEL +L  A +NP +PF AI+GG+KVS K+ VI  LLEKVD L++GGGM +TF KAQG+ VG+SL+E DK++    +MEKAK+KGV+LLLP DVV+AD FA DA   V     + + +MGLD+GP  I +F + +  +KT++WNGPMGVF
Sbjct:  162 VGAGEFLQERVCGYLIQKELKFLGEAVANPVRPFTAILGGAKVSDKLAVINELLEKVDNLIIGGGMAYTFLKAQGYEVGTSLLEIDKVEYAKEMMEKAKNKGVNLLLPVDVVMADHFAPDATPIVTEDANVKEDYMGLDMGPKTIANFVKTIKESKTVVWNGPMGVF 328          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CHLSY (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.005e-45
Identity = 87/159 (54.72%), Postives = 115/159 (72.33%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KEL Y+ GA +NP++PF  ++GG+K+S KIGVIE+LL KVD LL+GGGM  TF  A+G +VG SLVE D + +   LM +A+ +G  LLLP DVVIAD F+ADA  +VV  + IP GW  LD+GP  I+ +S  +   +T+IWNGPMGVF
Sbjct:  167 PAVAGFLMEKELTYIGGALNNPQRPFVTVIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAKGLNVGDSLVEPDSVPVAQQLMARAEERGARLLLPVDVVIADAFSADAQRQVVDVSDIPAGWRVLDIGPKTIERYSAEIRAARTVIWNGPMGVF 325          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CHLAA (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.005e-45
Identity = 87/159 (54.72%), Postives = 115/159 (72.33%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KEL Y+ GA +NP++PF  ++GG+K+S KIGVIE+LL KVD LL+GGGM  TF  A+G +VG SLVE D + +   LM +A+ +G  LLLP DVVIAD F+ADA  +VV  + IP GW  LD+GP  I+ +S  +   +T+IWNGPMGVF
Sbjct:  167 PAVAGFLMEKELTYIGGALNNPQRPFVTVIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAKGLNVGDSLVEPDSVPVAQQLMARAEERGARLLLPVDVVIADAFSADAQRQVVDVSDIPAGWRVLDIGPKTIERYSAEIRAARTVIWNGPMGVF 325          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_THEAB (Phosphoglycerate kinase OS=Thermosipho africanus (strain TCF52B) GN=pgk PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.536e-45
Identity = 83/160 (51.88%), Postives = 116/160 (72.50%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            PS AG LM+KE+ +L  A +NP+KP+  ++GG+KVS KIGVI +LL+K D +L+GG M+FTF K+ G++VGSSLVE+DKLDL   ++E+AK KG  ++LP D V A K  A   +K +     +P+GWMGLD+GP  ++ F  ++   KTI+WNGPMGVF
Sbjct:  164 PSVAGFLMEKEIKFLSKATTNPEKPYVVVLGGAKVSDKIGVITNLLDKADKILIGGAMMFTFLKSLGYNVGSSLVEDDKLDLAKRILEQAKEKGTEIVLPVDTVCAQKIEAGVETKTIDIKDGLPEGWMGLDIGPKTVELFRNSISGAKTIVWNGPMGVF 323          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_OCEIH (Phosphoglycerate kinase OS=Oceanobacillus iheyensis GN=pgk PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.536e-45
Identity = 83/159 (52.20%), Postives = 113/159 (71.07%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KE+  L  A  NP++PF AIVGG+KV  KI VI++LL+KVD L++GGG+ +TF KAQGH +G SL+EEDK+DL    M KAK KGV+ +LP D ++AD F+ +AN+K+V    IP  W  LD+G    + +S  +  +K +IWNGPMGVF
Sbjct:  164 PAAAGKLMEKEIEALGNALENPERPFTAIVGGAKVKDKISVIDNLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEEDKIDLAKEFMNKAKEKGVNFVLPVDAIVADDFSEEANTKIVDIDKIPSDWEALDIGTKTREKYSSIVKDSKLVIWNGPMGVF 322          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_LACF3 (Phosphoglycerate kinase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=pgk PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.537e-45
Identity = 88/156 (56.41%), Postives = 116/156 (74.36%), Query Frame = 3
Query:  129 AGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            AG LM+KE+ +L  A +NP +PF AI+GG+KVS KIGVI +LL+K D +++GGGM +TFY A+G  +G+SLVEEDK+D+   ++EKA   G  L+LP D V+ADKFA DAN+KVV    I DGWM LD+GP  I+ F + L   KT++WNGPMGVF
Sbjct:  178 AGFLMEKEIKFLGDAVTNPVRPFVAILGGAKVSDKIGVINNLLDKADKVIVGGGMTYTFYAAKGIKIGNSLVEEDKIDVAKEILEKA---GDKLVLPVDNVVADKFANDANTKVVEGD-IDDGWMALDIGPKSIEEFKKVLADAKTVVWNGPMGVF 329          
The following BLAST results are available for this feature:
BLAST of CX291517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CHLTE5.912e-4654.22Phosphoglycerate kinase OS=Chlorobium tepidum GN=p... [more]
PGK_ACIC55.912e-4655.09Phosphoglycerate kinase OS=Acidobacterium capsulat... [more]
PGK_CHLAD7.721e-4655.35Phosphoglycerate kinase OS=Chloroflexus aggregans ... [more]
PGK_CHLP82.247e-4555.77Phosphoglycerate kinase OS=Chlorobaculum parvum (s... [more]
PGK_CLOD62.934e-4552.69Phosphoglycerate kinase OS=Clostridium difficile (... [more]
PGK_CHLSY5.005e-4554.72Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]
PGK_CHLAA5.005e-4554.72Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]
PGK_THEAB6.536e-4551.88Phosphoglycerate kinase OS=Thermosipho africanus (... [more]
PGK_OCEIH6.536e-4552.20Phosphoglycerate kinase OS=Oceanobacillus iheyensi... [more]
PGK_LACF38.537e-4556.41Phosphoglycerate kinase OS=Lactobacillus fermentum... [more]

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Properties
Property NameValue
Genbank descriptionC03010B05SK OF2 Citrus clementina cDNA clone C03010B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291517 ID=CX291517; Name=CX291517; organism=Citrus clementina; type=EST; length=596bp
ACTCTCCTCACTATCTTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGA
AGAACGCTTTGACGATGTATGGGAAAGCCGGCGATGCTACCTCTGATTGG
AAGAAATAAGATCTTAAGGCCGTCTAAGGCTGGTATCCTGATGCAAAAGG
AACTANATTATCTTGTTGGAGCTGCTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTGTTATTGAATC
ACTTTTGGAGAAGGTTGACATTCTATTGCTCGGTGGAGGAATGATCTTTA
CCTTTTACAAGGCCCAAGGACACTCTGTTGGTTCATCCCTTGTTGAGGAA
GACAAGCTTGATCTCGGTACGTCACTTATGGAGAAGGCCAAATCTAAAGG
GGTGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAAGTTTGCTG
CTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAGATGGTTGG
ATGGGCTTGGATGTTGGACCTGATGACATCAAGTCATTCAGTGAAGCTTT
GGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGTGTTT
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