CX291517

Overview
NameCX291517
Unique NameCX291517
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_FINM2 (Phosphoglycerate kinase OS=Finegoldia magna (strain ATCC 29328) GN=pgk PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.537e-45
Identity = 89/167 (53.29%), Postives = 118/167 (70.66%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G +K L PS  G L+QKE+  +  A  NP++PF AI+GG+KVS KIGVIE+LL+KVD +L+GG M FTF K+QG +VG SL+EEDKLDL  SL+EKA+ KGV + LP D V+A +   +++SKV+      D   G D+G   IK F E +  +KTI+WNGPMGVF
Sbjct:  159 VGVSKFL-PSAVGFLVQKEIEIMGKALENPERPFTAILGGAKVSDKIGVIENLLDKVDTILIGGAMAFTFIKSQGKNVGKSLIEEDKLDLAKSLLEKAQEKGVKIFLPVDFVVAKEMTEESDSKVINIDDFTDDIAGFDIGTKTIKIFDEEIQKSKTIVWNGPMGVF 324          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOAB (Phosphoglycerate kinase OS=Clostridium acetobutylicum GN=pgk PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.537e-45
Identity = 84/167 (50.30%), Postives = 119/167 (71.26%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G  K +  +  G L+QKEL +L  A  NP +PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG+++G+SL+E DK+D    ++EKA++KGV LLLP D ++  +F AD  +       IP+G+MGLD+GP   K +++A+   KT++WNGPMGVF
Sbjct:  160 VGVTKFVDTAVCGYLIQKELKFLGSAVENPVRPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTIGTSLLEADKVDYAKEMIEKAEAKGVKLLLPIDNIVGAEFKADTKAVTTEDANIPEGYMGLDIGPKTQKLYADAVKEAKTVVWNGPMGVF 326          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_BACSU (Phosphoglycerate kinase OS=Bacillus subtilis GN=pgk PE=1 SV=3)

HSP 1 Score: 179.489 bits (454), Expect = 1.115e-44
Identity = 83/159 (52.20%), Postives = 117/159 (73.58%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KEL  L  A SNP +PF AI+GG+KV  KIGVIESLL+KVD L++GGG+ +TF KA G+ VG SL+EEDK++L  S M++AK KGV+  +P DV++AD F+ DAN K+VP + IP     +D+G    +++++ +  +K ++WNGPMGVF
Sbjct:  164 PAVAGFLMEKELDVLGKAVSNPDRPFTAIIGGAKVKDKIGVIESLLDKVDNLIIGGGLAYTFVKALGYEVGKSLLEEDKIELAKSFMDRAKEKGVNFYMPEDVLVADDFSNDANVKIVPISEIPSDLEAIDIGTKTRETYADVIKNSKLVVWNGPMGVF 322          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLONN (Phosphoglycerate kinase OS=Clostridium novyi (strain NT) GN=pgk PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.456e-44
Identity = 85/167 (50.90%), Postives = 117/167 (70.06%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G    L  +  G L+QKEL +L  A   P +PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG+++G SLVEEDK++    +M+KAK+KGV LLLP D V+ ++F A+          IP+G+MGLD+GP     +++A+ T KT++WNGPMGVF
Sbjct:  161 VGVADFLNEAACGYLIQKELKFLGDAVETPVRPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTIGKSLVEEDKVEYAKEMMDKAKAKGVKLLLPVDNVVGEEFDANTTPVTTEDANIPEGYMGLDIGPKTSALYADAVRTAKTVVWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOK5 (Phosphoglycerate kinase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=pgk PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.456e-44
Identity = 86/167 (51.50%), Postives = 118/167 (70.66%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G  K L  +  G L+QKEL +L  A  NP +PF AI+GG KVS KI VI +LLEKVD L++GGGM +TF +AQG+++G+S+VEEDK++    +++KAK KG+ LLLP D V+ DKF   A   +     I DG+MG+D+GP   K +++A+  +KTIIWNGPMGVF
Sbjct:  161 VGVTKFLPTAVCGYLIQKELEFLGNAIENPSRPFTAILGGVKVSDKINVINNLLEKVDTLIIGGGMSYTFARAQGYTIGTSVVEEDKIEYAKEMIDKAKEKGIKLLLPIDRVVTDKFDESAEPILEDDKNIKDGYMGMDIGPKTAKVYADAIKDSKTIIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOK1 (Phosphoglycerate kinase OS=Clostridium kluyveri (strain NBRC 12016) GN=pgk PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.456e-44
Identity = 86/167 (51.50%), Postives = 118/167 (70.66%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G  K L  +  G L+QKEL +L  A  NP +PF AI+GG KVS KI VI +LLEKVD L++GGGM +TF +AQG+++G+S+VEEDK++    +++KAK KG+ LLLP D V+ DKF   A   +     I DG+MG+D+GP   K +++A+  +KTIIWNGPMGVF
Sbjct:  161 VGVTKFLPTAVCGYLIQKELEFLGNAIENPSRPFTAILGGVKVSDKINVINNLLEKVDTLIIGGGMSYTFARAQGYTIGTSVVEEDKIEYAKEMIDKAKEKGIKLLLPIDRVVTDKFDESAEPILEDDKNIKDGYMGMDIGPKTAKVYADAIKDSKTIIWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_PELTS (Phosphoglycerate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=pgk PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.902e-44
Identity = 87/159 (54.72%), Postives = 116/159 (72.96%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG+LM+KEL  L    ++P++PFAA+VGGSKVS K+GVI +LL KVD +++GGGM  TF KAQG+SVG SL+E DK+DL   L+ +A+S+ V LLLP DVV+A   A     + VP   IP  WM LD+GP+ I+ F+EAL   +T++WNGPMGVF
Sbjct:  164 PAVAGLLMEKELEILGRLLTSPERPFAAVVGGSKVSDKLGVIFNLLTKVDTVIIGGGMANTFLKAQGYSVGKSLLEADKIDLARKLIAEARSREVKLLLPVDVVVAPGPAPGQEQRTVPVDQIPAEWMALDIGPESIRLFTEALRAARTVVWNGPMGVF 322          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_ENTFA (Phosphoglycerate kinase OS=Enterococcus faecalis GN=pgk PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.484e-44
Identity = 89/159 (55.97%), Postives = 116/159 (72.96%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KE+ ++  A  NPK+PF AI+GG+KVS KI VIE+L+EK D +L+GGGM +TF KAQG+SVG SL+EEDK+DL  SLMEKA   G  L+LP D V++ +F+ DA    VP+T IPD   GLD+G   I+ F+  L   KT++WNGPMGVF
Sbjct:  170 PTVAGFLMEKEIKFIGEAVENPKRPFVAILGGAKVSDKIAVIENLIEKADKILIGGGMAYTFMKAQGYSVGLSLLEEDKVDLAKSLMEKA---GDKLVLPVDTVVSKEFSNDAPFHTVPSTEIPDDEEGLDIGEKTIELFANELQGAKTVVWNGPMGVF 325          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CARHZ (Phosphoglycerate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=pgk PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.484e-44
Identity = 89/159 (55.97%), Postives = 113/159 (71.07%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG LM+KE+ +L  A +NP++PF AI+GG+KVS KIGVIE+LL KVD+LL+GGGM  TF KA G+  G SLVEEDK++L   LM KAK  GV LLLP+DVV+A +  A   SK+V   +IP   M LD+G    K F E +   KT++WNGPMGVF
Sbjct:  165 PAVAGFLMEKEINFLSRALNNPERPFVAIIGGAKVSDKIGVIENLLGKVDVLLIGGGMANTFLKAMGYETGKSLVEEDKVNLAGELMNKAKEVGVKLLLPSDVVVAPRIEAGVPSKIVAVDSIPAEEMALDIGEKTAKHFREEILKAKTVVWNGPMGVF 323          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_DEIDV (Phosphoglycerate kinase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=pgk PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.533e-44
Identity = 87/159 (54.72%), Postives = 117/159 (73.58%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P  AG L+Q E+  L      P+ P+  I+GG+KVS KI VIE+LL KVD +L+GGGM+FTF KA+G  +G+SLVE+D++D    L+E+   K   L+LPTD V AD+FAADA+++VVPA  IP+GWMGLD+GPD  ++++EAL   KT+ WNGPMGVF
Sbjct:  163 PHAAGTLLQTEVEALGRLIEAPESPYVVIIGGAKVSDKIKVIENLLPKVDRMLIGGGMMFTFIKARGGVIGNSLVEDDQVDYARGLLEQFGDK---LMLPTDAVAADRFAADADTRVVPADQIPEGWMGLDIGPDTQQAYTEALRGAKTVFWNGPMGVF 318          
The following BLAST results are available for this feature:
BLAST of CX291517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_FINM28.537e-4553.29Phosphoglycerate kinase OS=Finegoldia magna (strai... [more]
PGK_CLOAB8.537e-4550.30Phosphoglycerate kinase OS=Clostridium acetobutyli... [more]
PGK_BACSU1.115e-4452.20Phosphoglycerate kinase OS=Bacillus subtilis GN=pg... [more]
PGK_CLONN1.456e-4450.90Phosphoglycerate kinase OS=Clostridium novyi (stra... [more]
PGK_CLOK51.456e-4451.50Phosphoglycerate kinase OS=Clostridium kluyveri (s... [more]
PGK_CLOK11.456e-4451.50Phosphoglycerate kinase OS=Clostridium kluyveri (s... [more]
PGK_PELTS1.902e-4454.72Phosphoglycerate kinase OS=Pelotomaculum thermopro... [more]
PGK_ENTFA2.484e-4455.97Phosphoglycerate kinase OS=Enterococcus faecalis G... [more]
PGK_CARHZ2.484e-4455.97Phosphoglycerate kinase OS=Carboxydothermus hydrog... [more]
PGK_DEIDV5.533e-4454.72Phosphoglycerate kinase OS=Deinococcus deserti (st... [more]

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Properties
Property NameValue
Genbank descriptionC03010B05SK OF2 Citrus clementina cDNA clone C03010B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291517 ID=CX291517; Name=CX291517; organism=Citrus clementina; type=EST; length=596bp
ACTCTCCTCACTATCTTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGA
AGAACGCTTTGACGATGTATGGGAAAGCCGGCGATGCTACCTCTGATTGG
AAGAAATAAGATCTTAAGGCCGTCTAAGGCTGGTATCCTGATGCAAAAGG
AACTANATTATCTTGTTGGAGCTGCTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTGTTATTGAATC
ACTTTTGGAGAAGGTTGACATTCTATTGCTCGGTGGAGGAATGATCTTTA
CCTTTTACAAGGCCCAAGGACACTCTGTTGGTTCATCCCTTGTTGAGGAA
GACAAGCTTGATCTCGGTACGTCACTTATGGAGAAGGCCAAATCTAAAGG
GGTGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAAGTTTGCTG
CTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAGATGGTTGG
ATGGGCTTGGATGTTGGACCTGATGACATCAAGTCATTCAGTGAAGCTTT
GGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGTGTTT
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