CX291517

Overview
NameCX291517
Unique NameCX291517
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_LACCB (Phosphoglycerate kinase OS=Lactobacillus casei (strain BL23) GN=pgk PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.227e-44
Identity = 89/167 (53.29%), Postives = 119/167 (71.26%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G    ++ + AG LM+KE+ +L  A  NPK PF AI+GG+KVS KIGVIE+L+ K D +L+GGGM +TFY A+G S+G SLVE+DK++L   +M++A   G  LLLP D V+A +F+ DA  KVV    IPDG+M LD+GP  IK F +AL   KT++WNGPMGVF
Sbjct:  162 VGIASNMKQTAAGFLMEKEIKFLGDAVDNPKHPFIAILGGAKVSDKIGVIENLVPKADKILIGGGMTYTFYAAKGMSIGKSLVEKDKIELAKKIMDQA---GDKLLLPVDSVVATEFSNDAPHKVVDGD-IPDGYMALDIGPKTIKEFKDALQGAKTVVWNGPMGVF 324          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_LACC3 (Phosphoglycerate kinase OS=Lactobacillus casei (strain ATCC 334) GN=pgk PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.227e-44
Identity = 89/167 (53.29%), Postives = 119/167 (71.26%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G    ++ + AG LM+KE+ +L  A  NPK PF AI+GG+KVS KIGVIE+L+ K D +L+GGGM +TFY A+G S+G SLVE+DK++L   +M++A   G  LLLP D V+A +F+ DA  KVV    IPDG+M LD+GP  IK F +AL   KT++WNGPMGVF
Sbjct:  162 VGIASNMKQTAAGFLMEKEIKFLGDAVDNPKHPFIAILGGAKVSDKIGVIENLVPKADKILIGGGMTYTFYAAKGMSIGKSLVEKDKIELAKKIMDQA---GDKLLLPVDSVVATEFSNDAPHKVVDGD-IPDGYMALDIGPKTIKEFKDALQGAKTVVWNGPMGVF 324          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_THELT (Phosphoglycerate kinase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=pgk PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.439e-44
Identity = 87/160 (54.37%), Postives = 107/160 (66.88%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            PS AG LM+KE+ +L      P  P+  ++GG+KVS KIGVI +LL K D LL+GG M+FTF KAQG  VGSSLVE DKLDL   ++E+AK K V ++LP D ++A K  A    K       I DGWMGLD+GP  IK F EAL   KT++WNGPMGVF
Sbjct:  165 PSVAGFLMEKEIDFLNKVTYEPDHPYVVVLGGAKVSDKIGVITNLLNKADKLLIGGAMMFTFLKAQGLKVGSSLVENDKLDLAKQILEQAKEKKVEIVLPVDAIVAQKIEAGVEKKTADLKDGIDDGWMGLDIGPKTIKVFEEALKNAKTVVWNGPMGVF 324          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CHLL2 (Phosphoglycerate kinase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=pgk PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.439e-44
Identity = 83/166 (50.00%), Postives = 120/166 (72.29%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G  + ++ + AG L++KEL YL  A   P++PF AI+GGSK+S KI V+E+L  KVD +L+GG M+FTF+KAQG   G+SLVEE+KL+L  SL+E+A  K + LLLP D++IA + +ADA S  V   AIPDG +G+D+GP+   ++ + +   +T++WNGPMGVF
Sbjct:  159 GITRYVQTAVAGYLIEKELMYLGKALQEPERPFVAILGGSKISGKIDVLENLFNKVDTVLIGGAMVFTFFKAQGLGTGNSLVEENKLELALSLIEQAARKNIKLLLPQDIIIAPEISADAESMAVAVNAIPDGMIGVDIGPETRAAYRQEILGARTVLWNGPMGVF 324          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CHLCH (Phosphoglycerate kinase OS=Chlorobium chlorochromatii (strain CaD3) GN=pgk PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.746e-43
Identity = 80/166 (48.19%), Postives = 120/166 (72.29%), Query Frame = 3
Query:   99 GRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            G    ++ + AG L+++EL YL  A   P++PF AI+GGSK+S KI V+E+L +KVD +L+GG M+FTF+KAQG+ VG SLVEE K++L  S++E+AK+KG+ LLLPTDVV+  + +ADA S V     +P+  +G+D+GP+   ++   +   +T++WNGPMGVF
Sbjct:  159 GITHYVQTAVAGFLIERELRYLGKALQEPERPFVAILGGSKISGKIDVLENLFKKVDTVLIGGAMVFTFFKAQGYEVGKSLVEESKIELALSILEQAKAKGIKLLLPTDVVVTAEISADAESSVASIADMPNNLIGVDIGPETAAAYRNEIIGARTVLWNGPMGVF 324          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_THETN (Phosphoglycerate kinase OS=Thermoanaerobacter tengcongensis GN=pgk PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.587e-43
Identity = 82/159 (51.57%), Postives = 115/159 (72.33%), Query Frame = 3
Query:  120 PSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            P+ AG L++KEL  +  A  NPK+PF AI+GG+KVS KIGVI +LLEKVD LL+GGGM +TF KA+G+ +G SL+EEDK++L   +MEKAK KGV+ +LP D VIA +  +    +VV    +P+  +G+D+GP  I+ +S+ +    T++WNGPMGVF
Sbjct:  165 PAVAGFLIEKELSIMGEALENPKRPFVAILGGAKVSDKIGVITNLLEKVDSLLIGGGMAYTFIKAKGYEIGKSLLEEDKIELAKEIMEKAKQKGVNFMLPVDTVIAKELKSGVPYEVVDIDKMPEDQIGVDIGPKTIEEYSKVIKHAMTVVWNGPMGVF 323          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_NAUPA (Phosphoglycerate kinase OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=pgk PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.587e-43
Identity = 84/156 (53.85%), Postives = 109/156 (69.87%), Query Frame = 3
Query:  129 AGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            AG L+ KE+ +      NP +PF A+VGGSKVS K+  + +LL KVD +++GGGM FTF KA G++VG+SLVE++ +D    +M +AK  GV   LP D+VIADKFA DA  K V A  IPDGWMGLD+GP  ++ F E L   +TI+WNGPMGVF
Sbjct:  172 AGFLLLKEINFFYKLLENPVRPFVAVVGGSKVSGKLQALINLLPKVDKIIIGGGMAFTFLKAMGYNVGNSLVEDELIDEALKIMAEAKRLGVKFYLPVDIVIADKFAEDAMVKYVTAQEIPDGWMGLDIGPASVRLFGEVLWDAQTILWNGPMGVF 327          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOPS (Phosphoglycerate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.587e-43
Identity = 87/167 (52.10%), Postives = 118/167 (70.66%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G  + L+P+  G L+QKEL +L  A   P++PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG++VGSSLVEEDK++    ++ KA+ KGV LLLP D  +A +F  D  + V     I +G+MGLD+GP     ++EA+   KT+IWNGPMGVF
Sbjct:  161 VGVTEYLKPAVCGYLIQKELKFLGDAVETPERPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTVGSSLVEEDKVEYAKEMLAKAEEKGVKLLLPVDHRVAKEF-KDVEAVVTEDQNIAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVF 326          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOPE (Phosphoglycerate kinase OS=Clostridium perfringens GN=pgk PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.587e-43
Identity = 87/167 (52.10%), Postives = 118/167 (70.66%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G  + L+P+  G L+QKEL +L  A   P++PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG++VGSSLVEEDK++    ++ KA+ KGV LLLP D  +A +F  D  + V     I +G+MGLD+GP     ++EA+   KT+IWNGPMGVF
Sbjct:  161 VGVTEYLKPAVCGYLIQKELKFLGDAVETPERPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTVGSSLVEEDKVEYAKEMLAKAEEKGVKLLLPVDHRVAKEF-KDVEAVVTEDQNIAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVF 326          
BLAST of CX291517 vs. ExPASy Swiss-Prot
Match: PGK_CLOP1 (Phosphoglycerate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.587e-43
Identity = 87/167 (52.10%), Postives = 118/167 (70.66%), Query Frame = 3
Query:   96 IGRNKILRPSKAGILMQKELXYLVGAASNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLGTSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDDIKSFSEALDTTKTIIWNGPMGVF 596
            +G  + L+P+  G L+QKEL +L  A   P++PF AI+GG+KVS KI VI +LLEKVD L++GGGM +TF KAQG++VGSSLVEEDK++    ++ KA+ KGV LLLP D  +A +F  D  + V     I +G+MGLD+GP     ++EA+   KT+IWNGPMGVF
Sbjct:  161 VGVTEYLKPAVCGYLIQKELKFLGDAVETPERPFVAILGGAKVSDKINVINNLLEKVDTLIIGGGMAYTFLKAQGYTVGSSLVEEDKVEYAKEMLAKAEEKGVKLLLPVDHRVAKEF-KDVEAVVTEDQNIAEGFMGLDIGPKTEAIYAEAIKDAKTVIWNGPMGVF 326          
The following BLAST results are available for this feature:
BLAST of CX291517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_LACCB7.227e-4453.29Phosphoglycerate kinase OS=Lactobacillus casei (st... [more]
PGK_LACC37.227e-4453.29Phosphoglycerate kinase OS=Lactobacillus casei (st... [more]
PGK_THELT9.439e-4454.38Phosphoglycerate kinase OS=Thermotoga lettingae (s... [more]
PGK_CHLL29.439e-4450.00Phosphoglycerate kinase OS=Chlorobium limicola (st... [more]
PGK_CHLCH2.746e-4348.19Phosphoglycerate kinase OS=Chlorobium chlorochroma... [more]
PGK_THETN3.587e-4351.57Phosphoglycerate kinase OS=Thermoanaerobacter teng... [more]
PGK_NAUPA3.587e-4353.85Phosphoglycerate kinase OS=Nautilia profundicola (... [more]
PGK_CLOPS3.587e-4352.10Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOPE3.587e-4352.10Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOP13.587e-4352.10Phosphoglycerate kinase OS=Clostridium perfringens... [more]

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Properties
Property NameValue
Genbank descriptionC03010B05SK OF2 Citrus clementina cDNA clone C03010B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291517 ID=CX291517; Name=CX291517; organism=Citrus clementina; type=EST; length=596bp
ACTCTCCTCACTATCTTCCTGACAATTGCCTCTGCTCACGTCTTCTTCGA
AGAACGCTTTGACGATGTATGGGAAAGCCGGCGATGCTACCTCTGATTGG
AAGAAATAAGATCTTAAGGCCGTCTAAGGCTGGTATCCTGATGCAAAAGG
AACTANATTATCTTGTTGGAGCTGCTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTGTTATTGAATC
ACTTTTGGAGAAGGTTGACATTCTATTGCTCGGTGGAGGAATGATCTTTA
CCTTTTACAAGGCCCAAGGACACTCTGTTGGTTCATCCCTTGTTGAGGAA
GACAAGCTTGATCTCGGTACGTCACTTATGGAGAAGGCCAAATCTAAAGG
GGTGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAAGTTTGCTG
CTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAGATGGTTGG
ATGGGCTTGGATGTTGGACCTGATGACATCAAGTCATTCAGTGAAGCTTT
GGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGTGTTT
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