CX291571

Overview
NameCX291571
Unique NameCX291571
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL3_ARATH (Phenylalanine ammonia-lyase 3 OS=Arabidopsis thaliana GN=PAL3 PE=1 SV=3)

HSP 1 Score: 393.66 bits (1010), Expect = 5.231e-109
Identity = 197/234 (84.19%), Postives = 213/234 (91.03%), Query Frame = 1
Query:    7 LTGRPNSKATGPNGEIIDAQEASKQAGFG-FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            L GRPNS++ GP+GEI+ A EA K AG   FFEL+PKEGLALVNGTAVGS LAS VL++AN L + SE+ SA+FAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A  LH+IDPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGV+MDNTRLA+A+IGKLMFAQF+ELVNDFYNNGLPSNLSGGRNPS
Sbjct:  205 LIGRPNSRSVGPSGEILTALEAFKLAGVSSFFELRPKEGLALVNGTAVGSALASTVLYDANILVVFSEVASAMFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKEALHLHKIDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVAMDNTRLALASIGKLMFAQFTELVNDFYNNGLPSNLSGGRNPS 438          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL1_RUBID (Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=PAL1 PE=2 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 5.231e-109
Identity = 197/236 (83.47%), Postives = 213/236 (90.25%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +L GRPNSK+ GP GE +   E  K AG   GFFELQPKEGLALVNGTAVGSG+ASMVLF+AN LA+LSE++SAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL+GSSYV  AKK+HE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDVSRNKALHGGNFQ  PIGV+MDNTRLAIA+IGKL+FAQFSELVND+YNNGLPS L+G  NPS
Sbjct:  209 LLIGRPNSKSVGPKGETLSPAEGFKLAGIDGGFFELQPKEGLALVNGTAVGSGMASMVLFDANTLAVLSEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILEGSSYVKEAKKVHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKALHGGNFQELPIGVAMDNTRLAIASIGKLIFAQFSELVNDYYNNGLPSILTGSSNPS 444          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL3_PHAVU (Phenylalanine ammonia-lyase class 3 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 1.925e-103
Identity = 191/236 (80.93%), Postives = 213/236 (90.25%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +L GR NSKA GP+GE ++A+EA   AG   GFFEL+PKEGLALVNGTAVGSG+ASMVLFEAN LALL+E+LSA+FAEVMQGKPEFTDHL HKLK+HPGQIEAAAIMEHILDGSSYV  AK L + DPLQKP++DRYAL TSPQWLGPQIE+IRF+TKSIEREINSVNDNPLIDV+RNKA+ GGNFQGTPIGVSMDN RLA+A+IGKL+FAQF+EL ND YNNGLPSNLS GRNPS
Sbjct:  211 LLIGRRNSKAVGPSGESLNAKEAFHLAGVDGGFFELKPKEGLALVNGTAVGSGVASMVLFEANILALLAEVLSAVFAEVMQGKPEFTDHLIHKLKYHPGQIEAAAIMEHILDGSSYVKNAK-LQQPDPLQKPRKDRYALVTSPQWLGPQIEIIRFSTKSIEREINSVNDNPLIDVTRNKAVSGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELANDLYNNGLPSNLSVGRNPS 445          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.742e-102
Identity = 185/237 (78.06%), Postives = 209/237 (88.19%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGFG---FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            ++TGRPNSKA GPNGE ++A+EA + +  G   F    P++GL  +    +  G+ASMVLFEAN LA+LSE+LSAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATK IEREINSVNDNPLIDV+R+KALHGGNFQGTPIGVSMDN+RLA+A+IGKL+FAQFSELVND+YNNGLPSNL+ GRNPS
Sbjct:  205 LITGRPNSKAVGPNGETLNAEEALRLSRSGRRIFRVASPRKGLPSLMAPPLVLGMASMVLFEANVLAVLSEVLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVARSKALHGGNFQGTPIGVSMDNSRLALASIGKLLFAQFSELVNDYYNNGLPSNLTAGRNPS 441          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL1_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=PAL PE=1 SV=2)

HSP 1 Score: 369.392 bits (947), Expect = 1.056e-101
Identity = 183/236 (77.54%), Postives = 208/236 (88.14%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            ++TGRPN++A  P+G  +DA EA K AG   GFF L PKEGLA+VNGT+VGS LA+ V+F+AN LA+LSE+LSA+F EVM GKPE+TDHLTHKLKHHPG IEAAAIMEHIL GSS+++ AKK++E+DPL KPKQDRYALRTSPQWLGPQIEVIR ATKSIERE+NSVNDNP+IDV R KALHGGNFQGTPIGVSMDN RLAIA IGKLMFAQFSELVN+FYNNGL SNL+G RNPS
Sbjct:  202 LITGRPNAQAISPDGRKVDAAEAFKLAGIEGGFFTLNPKEGLAIVNGTSVGSALAATVMFDANILAVLSEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGSIEAAAIMEHILAGSSFMSHAKKVNEMDPLLKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREVNSVNDNPVIDVHRGKALHGGNFQGTPIGVSMDNARLAIANIGKLMFAQFSELVNEFYNNGLTSNLAGSRNPS 437          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PALY_PINTA (Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL PE=3 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 9.255e-98
Identity = 177/235 (75.32%), Postives = 204/235 (86.81%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGFGF-FELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +LTGRPNS+    +G  +   EA K+ G    FELQPKEGLA+VNGT+VG+ LAS+V F+AN LALLSE++SA+F EVM GKPEFTD LTHKLKHHPGQ+EAAAIME++LDGSSY+  A KLHE++PLQKPKQDRY LRTSPQWLGPQ+E+IR AT  IEREINSVNDNP+IDV+R+KALHGGNFQGTPIGVSMDN RL+I+AIGKLMFAQFSELVND+YN GLPSNLSGG NPS
Sbjct:  219 LLTGRPNSRVRSRDGIEMSGAEALKKVGLEKPFELQPKEGLAIVNGTSVGAALASIVCFDANVLALLSEVISAMFCEVMNGKPEFTDPLTHKLKHHPGQMEAAAIMEYVLDGSSYMKHAAKLHEMNPLQKPKQDRYGLRTSPQWLGPQVEIIRSATHMIEREINSVNDNPVIDVARDKALHGGNFQGTPIGVSMDNLRLSISAIGKLMFAQFSELVNDYYNGGLPSNLSGGPNPS 453          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PALY_VITVI (Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera GN=PAL PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.800e-78
Identity = 143/150 (95.33%), Postives = 145/150 (96.67%), Query Frame = 1
Query:  256 TDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            TDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  AKKLHE+DPLQKPKQDRYALRTSPQWLGP IEVIR +TKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSG RNPS
Sbjct:    1 TDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKEAKKLHEMDPLQKPKQDRYALRTSPQWLGPHIEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGSRNPS 150          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PALY_RHORB (Phenylalanine ammonia-lyase OS=Rhodotorula rubra GN=PAL PE=3 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 5.906e-36
Identity = 94/230 (40.87%), Postives = 133/230 (57.83%), Query Frame = 1
Query:    7 LTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKP-EFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY-VNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN-SVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 687
            +TG P+SK    +G+I+ AQEA    G     L PKEGL LVNGTAV + +A++ L +A+ L+LL++ L+A+  E M G    F   L    + HP QIE A  +  +L+GS Y V+   ++   D     +QDRY LR SPQWLGP +  +  A   +  E   S  DNPLID+      HGG F  + +G +M+ TRLA+A +GK+ F Q +E++N   N  LPS L+
Sbjct:  231 ITGHPDSKVH-VDGKIMSAQEAIALKGLQPVVLGPKEGLGLVNGTAVSASMATLALTDAHVLSLLAQALTALTVEAMVGHAGSFHPFLHDVTRPHPTQIEVARNIRTLLEGSKYAVHHETEVKVKDDEGILRQDRYPLRCSPQWLGPLVSDMIHAHAVLSLEAGQSTTDNPLIDLENKMTHHGGAFMASSVGNTMEKTRLAVALMGKVSFTQLTEMLNAGMNRALPSCLA 459          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PALY_RHOTO (Phenylalanine ammonia-lyase OS=Rhodosporidium toruloides GN=PAL PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.931e-35
Identity = 95/233 (40.77%), Postives = 134/233 (57.51%), Query Frame = 1
Query:    7 LTGRPNSKATGPNG---EIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKP-EFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY-VNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREIN-SVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 687
            ++G P+SK    +    +I+ A+EA          L PKEGL LVNGTAV + +A++ L +A+ L+LLS+ L+A+  E M G    F   L    + HP QIE A  +  +L+GS + V+  +++   D     +QDRY LRTSPQWLGP +  +  A   +  E   S  DNPLIDV    + HGGNFQ   +  +M+ TRL +A IGKL F Q +E++N   N GLPS L+
Sbjct:  225 ISGHPDSKVHVVHEGKEKILYAREAMALFNLEPVVLGPKEGLGLVNGTAVSASMATLALHDAHMLSLLSQSLTAMTVEAMVGHAGSFHPFLHDVTRPHPTQIEVAGNIRKLLEGSRFAVHHEEEVKVKDDEGILRQDRYPLRTSPQWLGPLVSDLIHAHAVLTIEAGQSTTDNPLIDVENKTSHHGGNFQAAAVANTMEKTRLGLAQIGKLNFTQLTEMLNAGMNRGLPSCLA 457          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PALY_USTMA (Phenylalanine ammonia-lyase OS=Ustilago maydis GN=PAL1 PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.527e-34
Identity = 81/217 (37.33%), Postives = 127/217 (58.53%), Query Frame = 1
Query:   55 IDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKL-KHHPGQIEAAAIMEHILDGS---SYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDV--SRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 687
            + A EA +       + +PKE L L+NGTA  + +A +  +EA NLA L+++ +A+  E ++G         H++ + HPGQI++A  +  +L GS    ++   K +   +     +QDRY LRT+ QW+GP +E I  A +S++ EINS  DNP+ID      +  HGGNFQ   +  +++  RLA+ A+GK+ F Q +ELVN   N GLP+NL+
Sbjct:  239 VTADEACRMHKITPVQYEPKEALGLLNGTAFSASVAGLATYEAENLASLTQLTTAMAVEALKGTDASFAPFIHEIARPHPGQIKSAKFIRALLSGSRLAEHLENEKHVLFSEDNGTLRQDRYTLRTASQWVGPGLEDIENAKRSVDIEINSTTDNPMIDPYDGDGRIHHGGNFQAMAMTNAVEKIRLALCAMGKMTFQQMTELVNPAMNRGLPANLA 455          
The following BLAST results are available for this feature:
BLAST of CX291571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
PAL3_ARATH5.231e-10984.19Phenylalanine ammonia-lyase 3 OS=Arabidopsis thali... [more]
PAL1_RUBID5.231e-10983.47Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=P... [more]
PAL3_PHAVU1.925e-10380.93Phenylalanine ammonia-lyase class 3 OS=Phaseolus v... [more]
PAL1_IPOBA4.742e-10278.06Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PAL1_ORYSJ1.056e-10177.54Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PALY_PINTA9.255e-9875.32Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL ... [more]
PALY_VITVI2.800e-7895.33Phenylalanine ammonia-lyase (Fragment) OS=Vitis vi... [more]
PALY_RHORB5.906e-3640.87Phenylalanine ammonia-lyase OS=Rhodotorula rubra G... [more]
PALY_RHOTO2.931e-3540.77Phenylalanine ammonia-lyase OS=Rhodosporidium toru... [more]
PALY_USTMA5.527e-3437.33Phenylalanine ammonia-lyase OS=Ustilago maydis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC03010G06SK OF2 Citrus clementina cDNA clone C03010G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291571 ID=CX291571; Name=CX291571; organism=Citrus clementina; type=EST; length=705bp
GAGGTGCTCACCGGCCGGCCCAATTCTAAGGCCACCGGGCCTAATGGAGA
GATCATTGATGCCCAGGAAGCCTCTAAACAAGCGGGTTTCGGGTTCTTTG
AGTTGCAGCCTAAGGAGGGTCTTGCTCTTGTCAATGGCACTGCTGTTGGT
TCTGGCCTGGCTTCTATGGTTCTGTTTGAGGCTAACAACCTTGCTCTGTT
ATCAGAAATTTTGTCAGCTATTTTTGCTGAAGTCATGCAAGGCAAACCTG
AGTTCACCGATCACTTGACACACAAATTGAAGCACCATCCTGGCCAAATT
GAGGCTGCTGCTATAATGGAACATATCCTCGATGGCAGCTCTTATGTTAA
CGTGGCTAAGAAGTTGCATGAGATTGATCCTCTGCAGAAGCCGAAACAGG
ATCGTTATGCCCTGAGAACTTCACCACAATGGCTCGGCCCTCAGATCGAA
GTGATTCGGTTTGCAACCAAGTCTATTGAACGGGAGATCAACTCGGTGAA
TGACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATGGTGGCA
ATTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGTTTGGCT
ATTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACTTGTCAA
CGATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATC
CTAGC
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