CX291599

Overview
NameCX291599
Unique NameCX291599
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291599 vs. ExPASy Swiss-Prot
Match: SCPA_TRITO (Carboxypeptidase S1 homolog A OS=Trichophyton tonsurans GN=SCPA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 2
Query:    2 PLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTN-DYEMLGD 220
            PL +WLNGGPG SS+  G  QE GP  ++ D +    N ++WN + NML+++ P  VGFSY   TN  Y  + D
Sbjct:   97 PLSIWLNGGPGSSSM-IGLFQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTIND 169          
BLAST of CX291599 vs. ExPASy Swiss-Prot
Match: SCP48_ARATH (Serine carboxypeptidase-like 48 OS=Arabidopsis thaliana GN=SCPL48 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1
Query:  481 IANDSYTFLHKWFLKFPSYRRRTFYIAGESYAGRYIPELAELIHDRNKD-PSLYIDLKGILLGNPETSTAEDWQGLVDYA 717
            ++ND Y FL  +F + P + +  FYI GESYAG YIP LA  +H  NK+    +I+LKG  +GN  T+    +    DYA
Sbjct:  202 VSNDLYDFLQAFFKEHPQFVKNDFYITGESYAGHYIPALASRVHRGNKNKEGTHINLKGFAIGNGLTNPEIQYGAYADYA 281          
BLAST of CX291599 vs. ExPASy Swiss-Prot
Match: CBPY_SCHPO (Carboxypeptidase Y OS=Schizosaccharomyces pombe GN=cpy1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11
Identity = 29/60 (48.33%), Postives = 43/60 (71.67%), Query Frame = 2
Query:    2 PLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFS 181
            P+VLWLNGGPGCSS+  G   E+GP  ++ +    ++NP++WN  A+++FL+ PI  GFS
Sbjct:  616 PVVLWLNGGPGCSSLT-GLFMELGPSSINIETLKPEYNPHSWNSNASVIFLDQPINTGFS 674          
BLAST of CX291599 vs. ExPASy Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11
Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 2
Query:    2 PLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDY 205
            PLV+WL GGPG SS G+G  +EIGP  +DT    L+     W + A++LF+++P+G GFSY NTT+ Y
Sbjct:   69 PLVMWLQGGPGGSSTGFGNFEEIGP--LDTQ---LKPRNTTWLQWASLLFVDNPVGTGFSYVNTTDAY 131          
BLAST of CX291599 vs. ExPASy Swiss-Prot
Match: KEX1_YEAST (Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae GN=KEX1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11
Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 2
Query:    2 PLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDYEMLGDDFTGEL 238
            PL++WLNGGPGCSS+  GA  E GPF V++DG+ L  N  +W  + ++LF++ P G GFS     ++ ++  + F  +L
Sbjct:   90 PLIIWLNGGPGCSSMD-GALVESGPFRVNSDGK-LYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDL 166          
BLAST of CX291599 vs. ExPASy Swiss-Prot
Match: SPCA_TRIRU (Carboxypeptidase S1 homolog A OS=Trichophyton rubrum GN=SCPA PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.191e-11
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 2
Query:    2 PLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTN-DYEMLGD 220
            PL +WLNGGPG SS+  G  QE GP  V+ D +    N ++WN + NML+++ P  VGFSY   TN  Y  + D
Sbjct:   97 PLSIWLNGGPGSSSM-IGLFQENGPCWVNEDSKSTTNNSFSWNNKVNMLYIDQPNQVGFSYDVPTNITYSTIND 169          
BLAST of CX291599 vs. ExPASy Swiss-Prot
Match: SCP50_ARATH (Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.191e-11
Identity = 32/67 (47.76%), Postives = 46/67 (68.66%), Query Frame = 2
Query:    2 PLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTND 202
            PL++WL GGPGCSS+  G   E+GP+ V +    L+ NP AWN+   +LF+++PIGVGFS + +  D
Sbjct:   68 PLLVWLQGGPGCSSM-IGNFYELGPWRVVSRATDLERNPGAWNRLFGLLFVDNPIGVGFSIAASQQD 133          
BLAST of CX291599 vs. ExPASy Swiss-Prot
Match: RISC_HUMAN (Retinoid-inducible serine carboxypeptidase OS=Homo sapiens GN=SCPEP1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.191e-11
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 2
Query:    2 PLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTT----NDYEMLGDDFTGELRTN*SC 256
            PLV+WL GGPG SS G+G  +EIGP  +D+D   L+     W + A++LF+++P+G GFSY N +     D  M+  D    L+T  SC
Sbjct:   69 PLVMWLQGGPGGSSTGFGNFEEIGP--LDSD---LKPRKTTWLQAASLLFVDNPVGTGFSYVNGSGAYAKDLAMVASDMMVLLKTFFSC 152          
BLAST of CX291599 vs. ExPASy Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 2
Query:    2 PLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGRGLQFNPYAWNKEANMLFLESPIGVGFSYSNTTNDY 205
            PLV+WL GGPG SS G+G  +EIGP  +DT    L+     W + A++LF+++P+G GFSY NTT+ Y
Sbjct:   69 PLVMWLQGGPGGSSTGFGNFEEIGP--LDT---RLKPRNTTWLQWASLLFVDNPVGTGFSYVNTTDAY 131          
The following BLAST results are available for this feature:
BLAST of CX291599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
SCPA_TRITO4.216e-1144.59Carboxypeptidase S1 homolog A OS=Trichophyton tons... [more]
SCP48_ARATH4.216e-1142.50Serine carboxypeptidase-like 48 OS=Arabidopsis tha... [more]
CBPY_SCHPO4.216e-1148.33Carboxypeptidase Y OS=Schizosaccharomyces pombe GN... [more]
RISC_MOUSE5.506e-1150.00Retinoid-inducible serine carboxypeptidase OS=Mus ... [more]
KEX1_YEAST5.506e-1141.77Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae ... [more]
SPCA_TRIRU7.191e-1145.95Carboxypeptidase S1 homolog A OS=Trichophyton rubr... [more]
SCP50_ARATH7.191e-1147.76Serine carboxypeptidase-like 50 OS=Arabidopsis tha... [more]
RISC_HUMAN7.191e-1142.70Retinoid-inducible serine carboxypeptidase OS=Homo... [more]
RISC_RAT9.392e-1150.00Retinoid-inducible serine carboxypeptidase OS=Ratt... [more]

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Properties
Property NameValue
Genbank descriptionC03011B06SK OF2 Citrus clementina cDNA clone C03011B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291599 ID=CX291599; Name=CX291599; organism=Citrus clementina; type=EST; length=745bp
ACCCTTGGTGCTTTGGCTTAATGGAGGCCCTGGATGTTCTTCTGTAGGAT
ATGGAGCAACACAGGAGATTGGTCCTTTTCTAGTGGACACTGACGGCCGC
GGTCTTCAATTTAATCCCTATGCTTGGAATAAAGAAGCCAATATGTTATT
CCTGGAGTCACCTATTGGAGTTGGCTTTTCTTACTCCAATACAACTAACG
ATTATGAAATGCTGGGCGATGACTTTACAGGTGAGTTGCGCACAAACTGA
TCTTGCTGATGCAGATACACATATACAGCTGACATTATATCACTCACATA
AGGTTTATCATTGTTGGTGAAAAGTGCAACTAGTGATACACTATCATGCA
TTTTGATGTTAAGTTGTTAACACACGCACATACGTGGGTACATAACTTTT
TTTCCCCCCCTTTAATTATATGAGTCTAAAATTTTGAAAACACTATTTCT
TAATTTGCATTTATTTATGTTCTTTCTATCATAGCAAATGATTCTTATAC
CTTCTTGCACAAGTGGTTCCTCAAGTTTCCATCATACCGAAGAAGAACCT
TTTACATTGCTGGGGAGAGCTATGCAGGAAGATATATTCCAGAGCTGGCC
GAGCTCATCCATGACAGGAACAAGGATCCTTCTTTATATATAGATCTCAA
GGGCATTTTGCTGGGAAATCCCGAAACATCTACGGCTGAAGATTGGCAAG
GTCTCGTGGATTATGCTTGGAGCCATGCTGTGGTATCTGATGAAA
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