CX291605

Overview
NameCX291605
Unique NameCX291605
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length366
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291605 vs. ExPASy Swiss-Prot
Match: METE_DICDI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Dictyostelium discoideum GN=metE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.465e-11
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 3
Query:    3 IPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 164
            IPS E++ DR+ +ML  L TN+LW+NPDCGLKTR+    + AL NMV  AK  R
Sbjct:  765 IPSVEDMKDRVEQMLKYLSTNLLWINPDCGLKTREPETTRLALINMVKVAKQFR 818          
BLAST of CX291605 vs. ExPASy Swiss-Prot
Match: METE_BURS3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia sp. (strain 383) GN=metE PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.750e-11
Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 3
Query:    3 IPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 173
            IP+ E I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK LR Q+
Sbjct:  707 IPTQEHIVGLMKKAAERIPAERLWVNPDCGLKTRQWAEVIPALTNMVAAAKTLRNQV 763          
BLAST of CX291605 vs. ExPASy Swiss-Prot
Match: METE_BURCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=metE PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.750e-11
Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 3
Query:    3 IPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 173
            IP+ + I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK+LR Q+
Sbjct:  707 IPTQDHIVGLMRKAAERIPAERLWVNPDCGLKTRQWAEVIPALTNMVAAAKMLRNQV 763          
BLAST of CX291605 vs. ExPASy Swiss-Prot
Match: METE_BRAJA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bradyrhizobium japonicum GN=metE PE=3 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.750e-11
Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 3
Query:    3 IPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 164
            +P T+E+ + I      L+ + LWVNPDCGLKTRK+ EV+PAL+NMVAAA+ LR
Sbjct:  720 VPETDEMKELIVLARTRLQDSQLWVNPDCGLKTRKWEEVRPALANMVAAARELR 773          
BLAST of CX291605 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.750e-11
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 3
Query:    6 PSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 164
            PS  EI D++ K+L  +  + LW+NPDCGLKTR + E++ +L+NMV AAK LR
Sbjct:  710 PSINEIMDKLKKLLQYIPKDRLWINPDCGLKTRSWNEIRESLNNMVIAAKTLR 762          
BLAST of CX291605 vs. ExPASy Swiss-Prot
Match: METE_ACIF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metE PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.750e-11
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 3
Query:    3 IPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 170
            +PS EE+   + K + V+    LW+NPDCGLKTRK+ EV PAL NMV AA+ +R +
Sbjct:  727 VPSVEEMVGLMEKAVKVVPAERLWINPDCGLKTRKWAEVTPALENMVEAARQVRAR 782          
BLAST of CX291605 vs. ExPASy Swiss-Prot
Match: METE_ACIF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metE PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.750e-11
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 3
Query:    3 IPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 170
            +PS EE+   + K + V+    LW+NPDCGLKTRK+ EV PAL NMV AA+ +R +
Sbjct:  727 VPSVEEMVGLMEKAVKVVPAERLWINPDCGLKTRKWAEVTPALENMVEAARQVRAR 782          
The following BLAST results are available for this feature:
BLAST of CX291605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
METE_DICDI7.465e-1155.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURS39.750e-1156.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCC9.750e-1154.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BRAJA9.750e-1157.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOFL9.750e-1152.835-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACIF59.750e-1151.795-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACIF29.750e-1151.795-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC03011B12SK OF2 Citrus clementina cDNA clone C03011B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291605 ID=CX291605; Name=CX291605; organism=Citrus clementina; type=EST; length=366bp
GAATACCATCAACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCT
GTGCTAGAAACCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGAC
TCGCAAGTACACTGAGGTGAAGCCAGCCCTCTCAAACATGGTTGCTGCTG
CCAAGCTACTCCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCCAGAG
ATTGGAGGGATACTTCCTGAGCCATTGATATTTTTTTCACTGTTAACAAA
GAAAGAAAATTCCTGTCTTATTACCTACCTATTCGAATAACTGTGGGTCG
TGATGTGATGAAAATTTTCCGTAGGCATATTATGCACTTGTGAGAAAATG
GCTTCTATTTTTCTTT
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