CX291621

Overview
NameCX291621
Unique NameCX291621
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291621 vs. ExPASy Swiss-Prot
Match: RL5_AEDAE (60S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.332e-54
Identity = 112/208 (53.85%), Postives = 139/208 (66.83%), Query Frame = 2
Query:    2 AAYAHELPRSGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRR-PFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTM-KKSEKPAPKEHKRYNLKKLTYEERKAKLVE 619
            AAY+HELPR G++VGLTNYAAAYCTGLL+ARR+L+ L +D  Y G  + TGE+Y VEP D     FR  LDVGL +TTTG R+F            IPHS KRF G+S + K  +AEVHR +I+G HVA YM TL E++ + Y+  F++YI  GI AD +E +YK  HA IR DP   KK EK   K  KR+NL KLT E RKAK+ +
Sbjct:   77 AAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYTGCTDVTGEEYLVEPVDDGPGAFRCYLDVGLARTTTGARIFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEVHRAHIFGQHVADYMRTLEEEDEDAYKRQFSKYIALGIKADDIETIYKNAHAGIRKDPAFHKKPEKKVTK--KRFNLAKLTLEARKAKIAK 282          
BLAST of CX291621 vs. ExPASy Swiss-Prot
Match: RL5_DROME (60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.968e-54
Identity = 111/206 (53.88%), Postives = 140/206 (67.96%), Query Frame = 2
Query:    2 AAYAHELPRSGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRR-PFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMK-KSEKPAPKEHKRYNLKKLTYEERKAKL 613
            AAY+HELP+ G++VGLTNYAAAYCTGLL+ARRVL  L +D  Y G  E TGE+++VEP D     FR  LDVGL +TTTG RVF            IPHS KRF G+S + K  +A+VHR +I+G HVA YM +L E++ E ++  F+ YIK GI AD LE +YKK H AIR DPT K  ++K +    KR+N KKLT E+RK K+
Sbjct:   77 AAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKSSAVTKKRWNAKKLTNEQRKTKI 282          
BLAST of CX291621 vs. ExPASy Swiss-Prot
Match: RL5_BOMMO (60S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.968e-54
Identity = 107/209 (51.20%), Postives = 144/209 (68.90%), Query Frame = 2
Query:    2 AAYAHELPRSGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRR-PFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSE-KPAPKEHKRYNLKKLTYEERKAKLVER 622
            AAY+HELPR G++VGLTNYAAAY TGLLLARR+L+ L +D  Y G  + TG++Y+VEP D     FR  LDVGL +TTTG RVF            +PHS KRF G+  + K+ +AEVHR +I+G HVA YM +L +D+ + ++  F++YIK G+ AD +EA+YKK H AIRADP+ KK E K    + KR+N +KLT  ERK ++ ++
Sbjct:   77 AAYSHELPRYGVKVGLTNYAAAYSTGLLLARRLLQRLGLDTLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGRRVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQK 285          
BLAST of CX291621 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.128e-53
Identity = 102/208 (49.04%), Postives = 144/208 (69.23%), Query Frame = 2
Query:    2 AAYAHELPRSGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEP-ADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVER 622
            +AYAHELPR G++VGLTNYAAAYCTGLLLARR+L  L + D+Y G  +  GED++VE   D  RPFRA LDVGL +TTTGNRVF            IPHS  RF G+ ++  QL+A+  R+YI+GGHV+ YM  L E++ EKY++HF+ +IK+GI AD +E +Y+  HA IRA+P  +K +       KR+N  K++ ++++ ++ ++
Sbjct:   77 SAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKYAGQTDIDGEDFNVEHMGDGPRPFRAFLDVGLTRTTTGNRVFAAMKGAVDGGIDIPHSPSRFVGYDEESSQLEADKLRQYIFGGHVSDYMKYLQEEDEEKYKAHFSRFIKEGITADSMEQMYRDAHAKIRANPAHEKKQPRDGLVKKRWNRAKMSLKQKRDRVKQK 284          
BLAST of CX291621 vs. ExPASy Swiss-Prot
Match: RL5_NEUCR (60S ribosomal protein L5 OS=Neurospora crassa GN=rpl-5 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.286e-53
Identity = 114/225 (50.67%), Postives = 147/225 (65.33%), Query Frame = 2
Query:    2 AAYAHELPRSGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADT----RRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHK--------RYNLKKLTYEERKAKLVERLNAPHS 640
            +AY+HEL   G+E GLTN+AAAY TGLLLARRVLK L +D+ ++G  EA GE    E A+T    RRPF+A LDVGL +T+TG RVF            IPHS+ RF G+  + ++LDAE  +KYI+GGHVA YM TL +D+ E+Y+S F  YI+  ++ADGLE LY + HAAIR DP  KK+E  APK+ K        +Y   KLT E+R A + ER+ A  S
Sbjct:   77 SAYSHELKAYGIEHGLTNWAAAYATGLLLARRVLKKLGLDETFKGVEEADGEYKLTEAAETDDGERRPFKAFLDVGLARTSTGARVFGAMKGASDGGIFIPHSENRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADDDEERYKSQFNRYIEDDLEADGLEDLYAEAHAAIREDP-FKKAESEAPKKTKEEWKAESLKYKKSKLTREQRAAGVQERIAALRS 300          
BLAST of CX291621 vs. ExPASy Swiss-Prot
Match: RL5_HELAN (60S ribosomal protein L5 OS=Helianthus annuus GN=RPL5A PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.311e-53
Identity = 109/206 (52.91%), Postives = 142/206 (68.93%), Query Frame = 2
Query:    2 AAYAHELPRSGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPA-DTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPA-PKEHKRYNLKKLTYEERKAKL 613
            AAYAHELP+ G++VGLTNYAAAYCTGLLLAR++L  L +D  Y G+ E TGE+++V+P  D    FR  LDVGL++TTTG RVF            I HS KRF GF  + K+ +A+VHR++I+G HVA YM  L E++ E Y+  F++YIK G++AD +E LYKK H AIRA+P  K   K A PK  KR+  KKLT E+R+ K+
Sbjct:   77 AAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDKLYIGSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRTTTGARVFGAMKGAVDGGLNILHSTKRFPGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEEDDEAYKRQFSQYIKLGLNADAIEGLYKKAHEAIRANPARKTVAKKAHPK--KRWTEKKLTREQRQGKV 280          
BLAST of CX291621 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3)

HSP 1 Score: 205.682 bits (522), Expect = 2.127e-52
Identity = 104/208 (50.00%), Postives = 139/208 (66.83%), Query Frame = 2
Query:    2 AAYAHELPRSGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRR-PFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVER 622
            AAYAHELPR G++VGLTNYAAAYCTGLLL+RR+L    +D+ YEG  E  G+++ VE  D +   FRA LDVGL +TTTG +VF            IPHS KRF G+  +     AEVHR +I+GGHV+ YM  L E++ E ++  F++YIK G+ AD +E +Y K HAAIR DPT KK    A K  KR+N KK+T+ +R+ ++ ++
Sbjct:   77 AAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMKGAADGGLDIPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEAFKRQFSQYIKHGVTADTVEEMYTKAHAAIREDPTPKKKTDFAGKT-KRWNRKKMTFSQRRDRVKQK 283          
BLAST of CX291621 vs. ExPASy Swiss-Prot
Match: RL5A_XENLA (60S ribosomal protein L5-A OS=Xenopus laevis GN=rpl5-A PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.127e-52
Identity = 103/208 (49.52%), Postives = 139/208 (66.83%), Query Frame = 2
Query:    2 AAYAHELPRSGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRR-PFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVER 622
            AAYAHELP+ G++VGLTNYAAAYCTGLLLARR+L    +D  YEG VE TG++Y+VE  D     F   LD GL +TTTGN+VF            IPHS KRF G+  + K+ + EVHRK+I+  +VA YM  LME++ + Y+  F++YIK G+ AD +E LYKK HA IR +P  +K  K   K+ KR+N  KL+ E++K ++ ++
Sbjct:   77 AAYAHELPKYGIKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESIDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNVAEYMRLLMEEDEDAYKKQFSQYIKNGVTADQVEDLYKKAHAGIRENPVHEKKPKKEVKK-KRWNRAKLSLEQKKDRVAQK 283          
BLAST of CX291621 vs. ExPASy Swiss-Prot
Match: RL5B_XENLA (60S ribosomal protein L5-B OS=Xenopus laevis GN=rpl5-B PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 2.778e-52
Identity = 102/208 (49.04%), Postives = 139/208 (66.83%), Query Frame = 2
Query:    2 AAYAHELPRSGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRR-PFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVER 622
            AAYAHELP+ G++VGLTNYAAAYCTGLLLARR+L    +D  YEG VE TG++Y+VE  D     F   LD GL +TTTGN+VF            IPHS KRF G+  + K+ + EVHRK+I+  ++A YM  LME++ + Y+  F++YIK G+ AD LE +YKK HA IR +P  +K  K   K+ KR+N  KL+ E++K ++ ++
Sbjct:   77 AAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNIAEYMRLLMEEDEDAYKKQFSQYIKNGVAADQLEDIYKKAHAGIRENPVHEKKPKKEVKK-KRWNRAKLSLEQKKDRVAQK 283          
BLAST of CX291621 vs. ExPASy Swiss-Prot
Match: RL5_DUNSA (60S ribosomal protein L5 OS=Dunaliella salina GN=RPL5 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.629e-52
Identity = 100/192 (52.08%), Postives = 134/192 (69.79%), Query Frame = 2
Query:    2 AAYAHELPRSGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPA-DTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYN 574
            AAY+ ELP  GL+VGLTNY+AAYC GLL+ARR+L  L + D Y+G  E  GEDY+VEP  D  +PF  LLD GL +T+TG++VF            IPH++KRF G++   K+LD EV +KYIYGGHVA Y  T+ E+EPEKYQ+HF+ Y++  I+ DG+E +YK+VHA IR +P   K E+  P + KR++
Sbjct:   77 AAYSKELPNYGLKVGLTNYSAAYCVGLLVARRILTKLNLADTYKGQEEPDGEDYNVEPVEDGPKPFYCLLDTGLKRTSTGSKVFAAMKGALDGGLDIPHNEKRFVGYAD--KKLDTEVLQKYIYGGHVAEYQETMQEEEPEKYQAHFSSYVENEIEPDGIEDMYKEVHAKIRENPCPPKKERTKPADAKRWS 266          
The following BLAST results are available for this feature:
BLAST of CX291621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RL5_AEDAE1.332e-5453.8560S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 ... [more]
RL5_DROME2.968e-5453.8860S ribosomal protein L5 OS=Drosophila melanogaste... [more]
RL5_BOMMO2.968e-5451.2060S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE... [more]
RL5_SUBDO1.128e-5349.0460S ribosomal protein L5 OS=Suberites domuncula GN... [more]
RL5_NEUCR4.286e-5350.6760S ribosomal protein L5 OS=Neurospora crassa GN=r... [more]
RL5_HELAN7.311e-5352.9160S ribosomal protein L5 OS=Helianthus annuus GN=R... [more]
RL5_STYCL2.127e-5250.0060S ribosomal protein L5 OS=Styela clava GN=RPL5 P... [more]
RL5A_XENLA2.127e-5249.5260S ribosomal protein L5-A OS=Xenopus laevis GN=rp... [more]
RL5B_XENLA2.778e-5249.0460S ribosomal protein L5-B OS=Xenopus laevis GN=rp... [more]
RL5_DUNSA3.629e-5252.0860S ribosomal protein L5 OS=Dunaliella salina GN=R... [more]

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Properties
Property NameValue
Genbank descriptionC03011D05SK OF2 Citrus clementina cDNA clone C03011D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291621 ID=CX291621; Name=CX291621; organism=Citrus clementina; type=EST; length=732bp
TGCTGCTTATGCCCATGAGCTTCCTCGTTCTGGACTTGAAGTAGGTCTTA
CAAACTATGCTGCAGCTTATTGCACTGGGCTTCTTTTGGCTCGTCGTGTC
TTGAAGATGCTTGAAATGGATGATGAGTATGAGGGCAATGTTGAGGCTAC
TGGAGAGGATTACTCTGTCGAACCAGCTGATACAAGGAGGCCATTCCGTG
CTCTCCTTGATGTTGGGCTCATCAAAACAACAACTGGAAACCGTGTCTTT
GGTGCTCTGAAGGGAGCATTAGATGGTGGATTGGACATTCCTCATAGTGA
CAAGAGGTTTGCTGGTTTTTCAAAGGACGGCAAGCAGCTGGATGCTGAGG
TTCACCGCAAGTATATCTATGGTGGACATGTTGCTGCTTACATGAGTACA
TTGATGGAAGATGAGCCAGAGAAGTATCAATCTCACTTCACTGAGTACAT
CAAGAAAGGAATTGATGCTGATGGCTTGGAGGCACTGTACAAGAAGGTTC
ATGCTGCCATTCGTGCAGATCCTACAATGAAGAAATCTGAGAAGCCAGCT
CCCAAAGAACATAAGAGGTATAATTTGAAGAAGCTTACTTACGAGGAAAG
GAAGGCGAAGCTGGTTGAAAGGCTGAATGCCCCTCACTCGGCAGTTGATG
AGGACGACGAATGAAAGCAGCATAACTAGATATGAATTCAAATATGTGGC
AGATCTGCAGTACACATTTGTTGTTGCAGTTC
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