CX291632

Overview
NameCX291632
Unique NameCX291632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length483
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.156e-18
Identity = 41/72 (56.94%), Postives = 56/72 (77.78%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            YF+NL+  +GLLQ+DQELFST G+ T AIV  +  +Q  FF +FV+SMI++GN+ PLTG  G+IR +C+RVN
Sbjct:  253 YFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 3.156e-18
Identity = 45/76 (59.21%), Postives = 54/76 (71.05%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 226
            Y+ NL  +KGL+QSDQELFS+P A DT  +V  F  +   FF  FV +M RMGN+ PLTG QG+IRLNCR VN NS
Sbjct:  263 YYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNS 338          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.122e-18
Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            YF NL+  +G+++SDQ LFS+ GA T ++V  F  NQN FF NF  SMI+MGN++ LTG +GEIR +CRRVN
Sbjct:  258 YFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGNVRILTGREGEIRRDCRRVN 329          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.122e-18
Identity = 45/76 (59.21%), Postives = 54/76 (71.05%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 226
            Y+ NL+ +KGL+QSDQELFS+P A DT  +V  +      FF  FV +M RMGN+ PLTG QGEIRLNCR VN NS
Sbjct:  242 YYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSYADGTQTFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNS 317          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.183e-18
Identity = 45/78 (57.69%), Postives = 54/78 (69.23%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNSNI 232
            Y+ NL+  KGL+QSDQELFS+P A DT  +V ++   Q  FF  F  +MIRM +L PLTG QGEIRLNCR VN  S I
Sbjct:  255 YYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVNSKSKI 332          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.183e-18
Identity = 46/78 (58.97%), Postives = 53/78 (67.95%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNSNI 232
            Y+ NL+  KGL+QSDQELFS+P A DT  +V  +   Q  FF  FV +MIRMGNL P TG QGEIRLNCR VN    I
Sbjct:  257 YYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFFDAFVEAMIRMGNLSPSTGKQGEIRLNCRVVNSKPKI 334          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.566e-17
Identity = 45/78 (57.69%), Postives = 54/78 (69.23%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTP-GADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNSNI 232
            Y+ NL+  KGL+QSDQELFS+P  ADT  +V  +   Q  FF  FV ++IRM +L PLTG QGEIRLNCR VN  S I
Sbjct:  255 YYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFFDAFVKAIIRMSSLSPLTGKQGEIRLNCRVVNSKSKI 332          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.046e-17
Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 226
            Y+ NL+ RKGL+QSDQELFS+P A DT  +V  +      FF  FV +M RMGN+ P TG QG+IRLNCR VN NS
Sbjct:  263 YYVNLKERKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNS 338          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.952e-17
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 226
            Y+ NL+ +KGL+QSDQELFS+P A DT  +V  +      FF  FV +M RMGN+ P TG QG+IRLNCR VN NS
Sbjct:  264 YYVNLKEQKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNS 339          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 1.732e-16
Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 226
            Y+ NL+  KGL+Q+DQELFS+P A DT  +V ++      FF  FV +M RMGN+ PLTG QG+IR NCR VN NS
Sbjct:  262 YYVNLKELKGLIQTDQELFSSPNATDTIPLVREYADGTQKFFNAFVEAMNRMGNITPLTGTQGQIRQNCRVVNSNS 337          
The following BLAST results are available for this feature:
BLAST of CX291632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PERX_TOBAC3.156e-1856.94Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER1A_ARMRU3.156e-1859.21Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER58_ARATH4.122e-1856.94Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER1C_ARMRU4.122e-1859.21Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER37_ARATH9.183e-1857.69Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER2_ARMRU9.183e-1858.97Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER38_ARATH1.566e-1757.69Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER34_ARATH2.046e-1757.89Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER33_ARATH5.952e-1756.58Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER32_ARATH1.732e-1655.26Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03011E05SK OF2 Citrus clementina cDNA clone C03011E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291632 ID=CX291632; Name=CX291632; organism=Citrus clementina; type=EST; length=483bp
ATACTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAGAGTGATCAAG
AGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGTCGAGGACTTT
GGGAGGAACCAGAATGCTTTCTTTAAAAACTTTGTGACCTCAATGATAAG
AATGGGAAATTTGAAACCACTGACAGGAAATCAAGGGGAGATTAGATTGA
ACTGCAGGAGGGTCAATGGAAACAGTAATATTGCAACAAGATCATCATCA
TCAGAGGGTGATTTGGTCAGCTCTTTCTAAATAAGCTAGCTTGCAGCATA
TGCGCGAGAGTTTTTGTGCTTAACAAACTCAAATTTAATCTGATCGTTTT
GCCTGAAACATGTTATGTACTTTCAAATAAATTAACGATCAAACTTGAGT
TTAATCTAATGGTCTTGTCTGAAAGATGTTATGTATTTTCAAATAGATTA
ATTAAACTTTAAAAAAAAAAAAAAAAAAAAAAA
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