CX291632

Overview
NameCX291632
Unique NameCX291632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length483
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 4.716e-14
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            YF NL   KGLL SDQ LFS+    +  +V+ +  +Q  FF+ F  SMI+MGN+ PLTG+ GEIR NCR++N
Sbjct:  260 YFKNLIENKGLLNSDQVLFSS-NEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 330          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.372e-13
Identity = 39/72 (54.17%), Postives = 48/72 (66.67%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            YF NL   KGLL SD+ LF T    +  +VE +  NQ AFF+ F  SM++MGN+ PLTG +GEIR  CRRVN
Sbjct:  263 YFKNLIMYKGLLSSDEILF-TKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVN 333          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.792e-13
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            Y++NL   KGLL SDQ LF+  G  T   V +F  N  AF   F  +M++MGN+ PLTG QG+IRLNC +VN
Sbjct:  245 YYTNLLSNKGLLHSDQVLFN--GGSTDNTVRNFSSNTAAFNSAFTAAMVKMGNISPLTGTQGQIRLNCSKVN 314          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.792e-13
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            Y++NL   KGLL SDQ LF+  G  T   V +F  N  AF   F  +M++MGN+ PLTG QG+IRLNC +VN
Sbjct:  245 YYTNLLSNKGLLHSDQVLFN--GGSTDNTVRNFSSNTAAFNSAFTVAMVKMGNISPLTGTQGQIRLNCSKVN 314          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.792e-13
Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            Y++NL  +KGLL SDQ LF+    D    V +F  N  AF  +F T+MI+MGN+ P TG QG+IRL+C RVN
Sbjct:  245 YYTNLMSQKGLLHSDQVLFNNDTTDNT--VRNFASNPAAFSSSFTTAMIKMGNIAPKTGTQGQIRLSCSRVN 314          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.341e-13
Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            Y++NL  +KGLL SDQ LF+    D    V +F  N  AF   F T+MI+MGN+ PLTG QG+IRL+C +VN
Sbjct:  242 YYTNLLSQKGLLHSDQVLFNNETTDNT--VRNFASNAAAFSSAFTTAMIKMGNIAPLTGTQGQIRLSCSKVN 311          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.057e-13
Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGN 223
            YF NL    GLL SD+ LFS+    +  +V+ +  +Q  FF+ F  SMI+MGN+ PLTG+ GEIR NCR++N +
Sbjct:  266 YFKNLIENMGLLNSDEVLFSS-NEQSRELVKKYAEDQEEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKINNS 338          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 3.992e-13
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            Y+ NL  +KGLL +DQ LF + GA T  IV ++ +N++ F  +F T+MI+MGN++PLTG+ GEIR  C  VN
Sbjct:  251 YYKNLMQKKGLLVTDQVLFGS-GASTDGIVSEYSKNRSKFAADFATAMIKMGNIEPLTGSNGEIRKICSFVN 321          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 3.992e-13
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            Y+ NL   +GLL SD+ LF T   +T  +V+ +  N+ AFF+ F  SM++MGN+ PLTG  GEIR  CRRVN
Sbjct:  271 YYKNLVNFRGLLSSDEILF-TQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVN 341          
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 2
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            Y+ NLR +KGLL SDQ+LF+  G  T + V  +  N   F  +F  +MI+MGNL PLTG  G+IR NCR+ N
Sbjct:  247 YYINLRNKKGLLHSDQQLFN--GVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 316          
The following BLAST results are available for this feature:
BLAST of CX291632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PER49_ARATH4.716e-1451.39Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER72_ARATH1.372e-1354.17Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER2_ORYSJ1.792e-1351.39Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI1.792e-1351.39Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER1_HORVU1.792e-1351.39Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER1_WHEAT2.341e-1351.39Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER15_ARATH3.057e-1347.30Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER5_ARATH3.992e-1350.00Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER36_ARATH3.992e-1350.00Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER1_ARAHY6.810e-1350.00Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03011E05SK OF2 Citrus clementina cDNA clone C03011E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291632 ID=CX291632; Name=CX291632; organism=Citrus clementina; type=EST; length=483bp
ATACTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAGAGTGATCAAG
AGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGTCGAGGACTTT
GGGAGGAACCAGAATGCTTTCTTTAAAAACTTTGTGACCTCAATGATAAG
AATGGGAAATTTGAAACCACTGACAGGAAATCAAGGGGAGATTAGATTGA
ACTGCAGGAGGGTCAATGGAAACAGTAATATTGCAACAAGATCATCATCA
TCAGAGGGTGATTTGGTCAGCTCTTTCTAAATAAGCTAGCTTGCAGCATA
TGCGCGAGAGTTTTTGTGCTTAACAAACTCAAATTTAATCTGATCGTTTT
GCCTGAAACATGTTATGTACTTTCAAATAAATTAACGATCAAACTTGAGT
TTAATCTAATGGTCTTGTCTGAAAGATGTTATGTATTTTCAAATAGATTA
ATTAAACTTTAAAAAAAAAAAAAAAAAAAAAAA
back to top