CX291632

Overview
NameCX291632
Unique NameCX291632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length483
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 6.374e-11
Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 2 
Query:    2 YFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            YF NL  ++GLL SDQ LF+  G  T +IV  +  + ++F  +F  +MI+MG++ PLTG+ GEIR  C + N
Sbjct:  227 YFKNLMAQRGLLHSDQVLFN--GGSTDSIVRGYSNSPSSFNSDFAAAMIKMGDISPLTGSSGEIRKVCGKTN 296
[Close]
BLAST of CX291632 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.374e-11
Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 2 
Query:    2 YFSNLRGRKGLLQSDQELFSTPGA--DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 217
            YF NL   KGLL SDQ LFS+  A   T  +VE + R+Q  FF++F  SMIRMG+L  + G  GE+R NCR +N
Sbjct:  256 YFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFTCSMIRMGSL--VNGASGEVRTNCRVIN 327
The following BLAST results are available for this feature:
BLAST of CX291632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PERP7_BRARA6.374e-1144.44Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PERN_ARMRU6.374e-1151.35Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC03011E05SK OF2 Citrus clementina cDNA clone C03011E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291632 ID=CX291632; Name=CX291632; organism=Citrus clementina; type=EST; length=483bp
ATACTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAGAGTGATCAAG
AGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGTCGAGGACTTT
GGGAGGAACCAGAATGCTTTCTTTAAAAACTTTGTGACCTCAATGATAAG
AATGGGAAATTTGAAACCACTGACAGGAAATCAAGGGGAGATTAGATTGA
ACTGCAGGAGGGTCAATGGAAACAGTAATATTGCAACAAGATCATCATCA
TCAGAGGGTGATTTGGTCAGCTCTTTCTAAATAAGCTAGCTTGCAGCATA
TGCGCGAGAGTTTTTGTGCTTAACAAACTCAAATTTAATCTGATCGTTTT
GCCTGAAACATGTTATGTACTTTCAAATAAATTAACGATCAAACTTGAGT
TTAATCTAATGGTCTTGTCTGAAAGATGTTATGTATTTTCAAATAGATTA
ATTAAACTTTAAAAAAAAAAAAAAAAAAAAAAA
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