CX291643

Overview
NameCX291643
Unique NameCX291643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291643 vs. ExPASy Swiss-Prot
Match: KCC1B_RAT (Calcium/calmodulin-dependent protein kinase type 1B OS=Rattus norvegicus GN=Pnck PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.180e-42
Identity = 91/219 (41.55%), Postives = 135/219 (61.64%), Query Frame = 3
Query:   27 VAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKD 680
            VA+K IPK  +    A+  V  E+ +LR ++ H N+V   D +E   ++Y+ MEL  GGEL DRI+ RG  Y+E+DA  ++ Q+L  V++ H  G+VHRDLKPEN L+ +  E+S +   DFGLS  ++    L    G+  YVAPE+L +  YG   D+W++GVI+YILLCG  PF+  ++  +F  +L+A   FD   W  +S  A DF++ LL +D
Sbjct:   41 VALKCIPKKALRGKEAL--VENEIAVLRRIS-HPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGS-YTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLSK-IQAGNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVISYILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERD 254          
BLAST of CX291643 vs. ExPASy Swiss-Prot
Match: KCC1B_MOUSE (Calcium/calmodulin-dependent protein kinase type 1B OS=Mus musculus GN=Pnck PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.180e-42
Identity = 91/219 (41.55%), Postives = 135/219 (61.64%), Query Frame = 3
Query:   27 VAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKD 680
            VA+K IPK  +    A+  V  E+ +LR ++ H N+V   D +E   ++Y+ MEL  GGEL DRI+ RG  Y+E+DA  ++ Q+L  V++ H  G+VHRDLKPEN L+ +  E+S +   DFGLS  ++    L    G+  YVAPE+L +  YG   D+W++GVI+YILLCG  PF+  ++  +F  +L+A   FD   W  +S  A DF++ LL +D
Sbjct:   41 VALKCIPKKALRGKEAL--VENEIAVLRRIS-HPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGS-YTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLSK-IQAGNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVISYILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERD 254          
BLAST of CX291643 vs. ExPASy Swiss-Prot
Match: KCC1B_HUMAN (Calcium/calmodulin-dependent protein kinase type 1B OS=Homo sapiens GN=PNCK PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.180e-42
Identity = 91/219 (41.55%), Postives = 135/219 (61.64%), Query Frame = 3
Query:   27 VAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRS-YGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKD 680
            VA+K IPK  +    A+  V  E+ +LR ++ H N+V   D +E   ++Y+ MEL  GGEL DRI+ RG  Y+E+DA  ++ Q+L  V++ H  G+VHRDLKPEN L+ +  E+S +   DFGLS  ++    L    G+  YVAPE+L +  YG   D+W++GVI+YILLCG  PF+  ++  +F  +L+A   FD   W  +S  A DF++ LL +D
Sbjct:   41 VALKCIPKKALRGKEAL--VENEIAVLRRIS-HPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGS-YTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLSK-IQAGNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVISYILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERD 254          
BLAST of CX291643 vs. ExPASy Swiss-Prot
Match: MYLKB_DICDI (Probable myosin light chain kinase DDB_G0271550 OS=Dictyostelium discoideum GN=DDB_G0271550 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.153e-42
Identity = 94/220 (42.73%), Postives = 137/220 (62.27%), Query Frame = 3
Query:   18 GLDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAI-DFGLSDYVKPDERLNDIVGSAYYVAPEVLH-RSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLL 671
            G  VA+K I K  ++ A  ++   RE++I++ L  HKN++Q  + ++ +D +Y+V+EL +GGEL D+I+ +G  YSE+DA  ++ QI+S V + H  GV HRDLKPEN L +  +E   +  I DFGLS   +  E L    G+  YVAPE+L  + Y T  DMWSIGVI YILLCG  PF+A T   +F+ +L  +  F E  W  ++  A DF+ +LL
Sbjct:   43 GDQVAIKAISKQHVSEA-DMKRFTREIEIMKKLK-HKNIIQLIEVFDSNDYLYLVLELIRGGELFDKIVEKGN-YSEKDACNLVRQIVSAVEYMHQHGVCHRDLKPENLLCSGDDEKEEIVRIADFGLSKIFEGGEELKTACGTPDYVAPEILECKPYDTSVDMWSIGVITYILLCGFAPFYADTHHELFQKILDLEYDFPEPEWNGITDLAKDFISQLL 259          
BLAST of CX291643 vs. ExPASy Swiss-Prot
Match: KCC1G_RAT (Calcium/calmodulin-dependent protein kinase type 1G OS=Rattus norvegicus GN=Camk1g PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.153e-42
Identity = 98/227 (43.17%), Postives = 136/227 (59.91%), Query Frame = 3
Query:    3 KGSLKGLDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKD 680
            K  + G   A+K I KS      ++E+   E+ +L+ +  H+N+V   D YE   + Y+VM+L  GGEL DRIL RG  Y+E+DA +V+ Q+LS V + H  G+VHRDLKPEN L+ + EENS +   DFGLS  ++ +  ++   G+  YVAPEVL  + Y    D WSIGVI YILLCG  PF+  TES +F  + +    F+   W  +S  A DF+  LL KD
Sbjct:   41 KQRVTGKLFALKCIKKSPAFRDSSLEN---EIAVLKRIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKD 261          
BLAST of CX291643 vs. ExPASy Swiss-Prot
Match: KCC1G_MOUSE (Calcium/calmodulin-dependent protein kinase type 1G OS=Mus musculus GN=Camk1g PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.153e-42
Identity = 98/227 (43.17%), Postives = 136/227 (59.91%), Query Frame = 3
Query:    3 KGSLKGLDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKD 680
            K  + G   A+K I KS      ++E+   E+ +L+ +  H+N+V   D YE   + Y+VM+L  GGEL DRIL RG  Y+E+DA +V+ Q+LS V + H  G+VHRDLKPEN L+ + EENS +   DFGLS  ++ +  ++   G+  YVAPEVL  + Y    D WSIGVI YILLCG  PF+  TES +F  + +    F+   W  +S  A DF+  LL KD
Sbjct:   41 KQRVTGKLFALKCIKKSPAFRDSSLEN---EIAVLKRIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKD 261          
BLAST of CX291643 vs. ExPASy Swiss-Prot
Match: KCC1A_RAT (Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus GN=Camk1 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.153e-42
Identity = 92/219 (42.01%), Postives = 129/219 (58.90%), Query Frame = 3
Query:   27 VAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKD 680
            VA+K I K  +        +  E+ +L  +  H N+V   D YE   ++Y++M+L  GGEL DRI+ +G  Y+E DA  ++ Q+L  V + H  G+VHRDLKPEN L+ S +E+S +   DFGLS    P   L+   G+  YVAPEVL  + Y    D WSIGVIAYILLCG  PF+   ++ +F  +LKA+  FD   W  +S  A DF++ L+ KD
Sbjct:   46 VAIKCIAKKALEGKEG--SMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 260          
BLAST of CX291643 vs. ExPASy Swiss-Prot
Match: KCC1A_MOUSE (Calcium/calmodulin-dependent protein kinase type 1 OS=Mus musculus GN=Camk1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.153e-42
Identity = 92/219 (42.01%), Postives = 129/219 (58.90%), Query Frame = 3
Query:   27 VAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKD 680
            VA+K I K  +        +  E+ +L  +  H N+V   D YE   ++Y++M+L  GGEL DRI+ +G  Y+E DA  ++ Q+L  V + H  G+VHRDLKPEN L+ S +E+S +   DFGLS    P   L+   G+  YVAPEVL  + Y    D WSIGVIAYILLCG  PF+   ++ +F  +LKA+  FD   W  +S  A DF++ L+ KD
Sbjct:   46 VAIKCIAKKALEGKEG--SMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 260          
BLAST of CX291643 vs. ExPASy Swiss-Prot
Match: KCC1A_HUMAN (Calcium/calmodulin-dependent protein kinase type 1 OS=Homo sapiens GN=CAMK1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.153e-42
Identity = 92/219 (42.01%), Postives = 129/219 (58.90%), Query Frame = 3
Query:   27 VAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVL-HRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLLNKD 680
            VA+K I K  +        +  E+ +L  +  H N+V   D YE   ++Y++M+L  GGEL DRI+ +G  Y+E DA  ++ Q+L  V + H  G+VHRDLKPEN L+ S +E+S +   DFGLS    P   L+   G+  YVAPEVL  + Y    D WSIGVIAYILLCG  PF+   ++ +F  +LKA+  FD   W  +S  A DF++ L+ KD
Sbjct:   46 VAIKCIAKEALEGKEG--SMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKD 260          
BLAST of CX291643 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAFK (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 4.153e-42
Identity = 90/222 (40.54%), Postives = 135/222 (60.81%), Query Frame = 3
Query:   15 KGLDVAVKVIPKSKMTTAIAIEDVRR---EVKILRALTGHKNLVQFYDAYEDDDNIYIVMELCKGGELLDRILSRGGKYSEEDAKIVMVQILSVVAFCHFQGVVHRDLKPENFLFTSKEENSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAIDFVKRLL 671
            KG+D     +   K      ++++ R   E++I++ L  H N+V+ Y+ YE+D+ IY++MELC G EL D I+  G  ++E++A  +M QI S + + H   +VHRDLKPENFLF S+ ++S LK IDFGLS  +   E      G+ YYVAP+VL   Y  + D+WS GVI Y LLCG  PF+  T++ + + V K +  F E  W S+S +A + + +LL
Sbjct:   88 KGIDKVTNQLYAIKEEKKDRLKNINRFFQEIEIMKKLD-HPNIVKLYETYENDNYIYLIMELCSGRELFDSIIENGS-FTEKNAATIMKQIFSAIFYLHSLNIVHRDLKPENFLFQSENKDSLLKIIDFGLSKNLGTGEFTTTKAGTPYYVAPQVLDGKYDKKCDIWSSGVIMYTLLCGYPPFYGDTDNEVLKKVKKGEFCFYENDWGSISSDAKNLITKLL 307          
The following BLAST results are available for this feature:
BLAST of CX291643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KCC1B_RAT3.180e-4241.55Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1B_MOUSE3.180e-4241.55Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1B_HUMAN3.180e-4241.55Calcium/calmodulin-dependent protein kinase type 1... [more]
MYLKB_DICDI4.153e-4242.73Probable myosin light chain kinase DDB_G0271550 OS... [more]
KCC1G_RAT4.153e-4243.17Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1G_MOUSE4.153e-4243.17Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1A_RAT4.153e-4242.01Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1A_MOUSE4.153e-4242.01Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1A_HUMAN4.153e-4242.01Calcium/calmodulin-dependent protein kinase type 1... [more]
CDPK2_PLAFK4.153e-4240.54Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03011F04SK OF2 Citrus clementina cDNA clone C03011F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291643 ID=CX291643; Name=CX291643; organism=Citrus clementina; type=EST; length=702bp
AAAAAGGAAGTTTGAAAGGTCTCGATGTGGCTGTCAAAGTTATTCCTAAG
TCAAAGATGACTACTGCAATTGCCATCGAGGATGTGAGACGAGAAGTGAA
GATATTGCGAGCTCTTACAGGGCATAAGAACCTTGTGCAGTTCTATGATG
CTTATGAAGATGATGACAACATTTACATAGTAATGGAATTGTGCAAAGGT
GGCGAGCTATTGGATAGAATACTTTCAAGGGGTGGAAAATATTCAGAAGA
AGACGCAAAGATTGTTATGGTTCAAATTTTGAGTGTGGTAGCGTTTTGTC
ATTTCCAAGGTGTGGTCCACCGTGATCTCAAGCCAGAGAATTTTCTTTTT
ACTTCTAAGGAAGAGAATTCATCCCTGAAGGCCATTGATTTTGGACTCTC
TGACTATGTAAAGCCAGATGAAAGGCTGAATGACATAGTAGGGAGTGCAT
ATTATGTAGCTCCTGAAGTACTACATCGATCATATGGCACTGAAGCTGAC
ATGTGGAGTATTGGTGTCATTGCTTATATTCTGTTATGTGGAAGCCGTCC
TTTTTGGGCTAGAACTGAATCTGGAATCTTTCGAGCTGTCCTTAAAGCAG
ATCCAAGCTTTGACGAAGCCCCTTGGCCTTCTTTATCCCCTGAGGCGATT
GATTTTGTGAAGAGATTATTAAACAAGGACTACCGCAGAGACTAACTGCT
GC
back to top