CX291648

Overview
NameCX291648
Unique NameCX291648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.231e-58
Identity = 106/174 (60.92%), Postives = 131/174 (75.29%), Query Frame = 2
Query:    2 WASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 523
            WA+KEG +  E MR +   + DV LHADAIHRG GQ++PT RR  YA  L A+P++ EPV++VEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + +DPL+P T+A ++V + RKR GLKE +    E+ DKL
Sbjct:  669 WATKEGPIFGEQMRSVRINLLDVTLHADAIHRGAGQIMPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAVGGIYSVLNRKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPTTKAGEIVVEARKRHGLKENVPGWQEYYDKL 842          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.511e-58
Identity = 105/174 (60.34%), Postives = 132/174 (75.86%), Query Frame = 2
Query:    2 WASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 523
            WA+KEG +  E MR +   + DV LHADAIHRG GQ++PT RR  YA  L A+P++ EPV++VEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  ++SDPL+P ++A ++V   RKR G+KE++    E+ DKL
Sbjct:  669 WATKEGPILGETMRSVRVNILDVTLHADAIHRGAGQIMPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLNSDPLDPTSKAGEIVTAARKRHGMKEEVPGWQEYYDKL 842          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_SACCA (Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.400e-58
Identity = 106/174 (60.92%), Postives = 130/174 (74.71%), Query Frame = 2
Query:    2 WASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 523
            WA+KEG +  E MR +   + DV LHADAIHRGGGQ+IPT RR  YA  L A+P++ EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + SDPL+P ++A ++V   RKR G+KE +    E+ DKL
Sbjct:  669 WATKEGPIFGEQMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLAEPKIQEPVFLVEIQCPESAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGSDPLDPTSKAGEIVTAARKRHGMKEVVPGWQEYYDKL 842          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.665e-57
Identity = 104/173 (60.12%), Postives = 132/173 (76.30%), Query Frame = 2
Query:    5 ASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 523
            A+KEG +  ENMR +   + DV LHADAIHRGGGQVIPT +RV YA+ L A+P + EP+++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT+GQAFPQ VFDHW  M+ +PL+P ++  ++V   RKR+G+KE +    E+ DKL
Sbjct:  670 ATKEGPILGENMRSVRVNILDVTLHADAIHRGGGQVIPTMKRVTYAAFLLAEPAIQEPIFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATAGQAFPQMVFDHWANMNGNPLDPASKVGEIVLAARKRQGMKENVPGYEEYYDKL 842          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.039e-56
Identity = 102/174 (58.62%), Postives = 130/174 (74.71%), Query Frame = 2
Query:    2 WASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 523
            WA+KEG +  EN+R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGFSG LR +T GQAFPQ +FDHW  ++ DP +P ++   +V + R+R+G+K  +    E+ DKL
Sbjct:  669 WATKEGPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFSGELRQSTGGQAFPQLIFDHWANLNGDPTDPTSKVGTIVKEKRERQGMKPDVPGYEEYYDKL 842          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 5.158e-56
Identity = 103/174 (59.20%), Postives = 128/174 (73.56%), Query Frame = 2
Query:    2 WASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 523
            WA+KEG +  EN R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ +FDHW +MS D  +  ++   +V + R R GLK ++   +E+ DKL
Sbjct:  669 WATKEGPIFGENCRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQLIFDHWQVMSGDVTDENSKPGAIVKEKRVRAGLKPEVPEYTEYYDKL 842          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.737e-56
Identity = 104/174 (59.77%), Postives = 129/174 (74.14%), Query Frame = 2
Query:    2 WASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 523
            WA+KEG +  EN+R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGFSG LR AT GQAFPQ VFDHW ++S D  +P ++   +    R+R+GLK ++    E+ DKL
Sbjct:  669 WATKEGPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFSGDLRQATGGQAFPQLVFDHWAVLSGDVTDPTSKPGIIAKAKRERQGLKPEVPGYEEYYDKL 842          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_DICDI (Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 2.560e-55
Identity = 103/174 (59.20%), Postives = 134/174 (77.01%), Query Frame = 2
Query:    2 WASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 523
            WA+KEG + +ENMRGI F + DV LH DAIHRGGGQ+IPTARRV+YA++LTA P LLEP+Y+VEI APE A+GGIYSVLN++RG V  E +R G+PL+++KA+LPV+ESFGF+  LR+ T+GQAFPQCVFDHW   S   +    +A ++    RKRKGL  ++  L +F +KL
Sbjct:  668 WATKEGVVCDENMRGIRFNLYDVTLHTDAIHRGGGQIIPTARRVLYAAELTASPTLLEPIYLVEITAPENAIGGIYSVLNRRRGIVIGEERRIGSPLFSVKAHLPVLESFGFTADLRSHTAGQAFPQCVFDHW--ASIGVVNKDKKATEVALATRKRKGLAPEIPDLDKFHEKL 839          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_ENTHI (Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.460e-52
Identity = 96/173 (55.49%), Postives = 126/173 (72.83%), Query Frame = 2
Query:    5 ASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 523
            A  +G +  E +RG+   + DV LHADAIHRGG Q+IP ARR  +A  LT  P LLEP+Y+ EIQ PE A+GGIY+V++++RG +  E QRPGTPL+N++AYLPV ESFGF+  LR+ TSGQAFPQCVFDHW +++ D  +  ++   +VA IRKRKGL E +  L +F DKL
Sbjct:  668 AMHDGVVCNEQIRGVRINLEDVKLHADAIHRGGAQMIPCARRCCFACVLTGAPSLLEPMYLAEIQCPESAIGGIYTVMSRRRGKIISEEQRPGTPLFNVRAYLPVCESFGFTADLRSHTSGQAFPQCVFDHWQLLNGDVTDATSKVGSIVAAIRKRKGLPEGVPGLDKFYDKL 840          
BLAST of CX291648 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46
Identity = 90/174 (51.72%), Postives = 118/174 (67.82%), Query Frame = 2
Query:    5 ASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMS-SDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 523
            A   G + +E  R +  ++ DV LHAD+IHRG GQ++P ARRV+  + L A+P L+EPV++ EIQ P    GGIY VL ++RGHVFEE+   GTP+ NIK+YLPV ESFGF+  LR AT+GQAFPQCVF HW   +  DPL  GT+  ++V  IR RKGL  ++     + DKL
Sbjct:  694 ACAAGPIVDEPCRNVLCKLMDVTLHADSIHRGMGQIMPPARRVVLGTMLKAEPILVEPVFLCEIQVPRAVSGGIYGVLTRRRGHVFEEIDEVGTPMMNIKSYLPVAESFGFTQDLRGATAGQAFPQCVFSHWQAYNGGDPLTEGTKTNEMVKSIRNRKGLAPEVPTPERYLDKL 867          
The following BLAST results are available for this feature:
BLAST of CX291648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EF2_ASHGO3.231e-5860.92Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_CANGA5.511e-5860.34Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_SACCA9.400e-5860.92Elongation factor 2 OS=Saccharomyces castellii GN=... [more]
EF2_PICPA4.665e-5760.12Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_DEBHA1.039e-5658.62Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_CANAL5.158e-5659.20Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_PICGU6.737e-5659.77Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_DICDI2.560e-5559.20Elongation factor 2 OS=Dictyostelium discoideum GN... [more]
EF2_ENTHI3.460e-5255.49Elongation factor 2 OS=Entamoeba histolytica GN=EF... [more]
EF2_BLAHO2.172e-4651.72Elongation factor 2 OS=Blastocystis hominis PE=2 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03011F09SK OF2 Citrus clementina cDNA clone C03011F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291648 ID=CX291648; Name=CX291648; organism=Citrus clementina; type=EST; length=714bp
GTGGGCATCGAAAGAAGGTGCGCTGGCTGAAGAGAACATGAGAGGTATCT
GCTTTGAAGTATGTGATGTTGTTCTTCACGCTGATGCCATTCACAGAGGT
GGTGGTCAAGTCATTCCTACTGCTAGGAGGGTCATATATGCTTCCCAGCT
CACAGCCAAGCCCAGGCTTCTTGAGCCTGTCTACATGGTCGAAATACAGG
CTCCCGAGCAGGCCCTTGGTGGTATTTACAGTGTTCTCAATCAGAAACGT
GGTCACGTGTTCGAGGAAATGCAGAGACCTGGTACCCCCCTTTACAACAT
CAAGGCTTACCTTCCCGTCATCGAGTCCTTTGGATTCTCAGGCACTTTGA
GGGCTGCAACGTCAGGACAGGCCTTCCCACAATGTGTGTTTGATCACTGG
GACATGATGTCATCCGATCCACTGGAGCCTGGTACACAGGCTGCACAGCT
TGTTGCTGATATCAGGAAGAGGAAGGGCTTGAAGGAGCAAATGACACCAC
TATCTGAGTTTGAGGACAAGCTGTAAACATTTCGTCTTGACATCAAGGGT
GAGATTGCGCAGCTTGTTGCTGATATCAGGAAGAGGGAGCAAATGACACC
GCTATCCGAGTAGAGGACGAGCTGTAAACATTTCATCTTGACATCAAGGG
TGAGATTGCGCAGCAATATTTTTTGCTGATGCTTATTTTTGTTTCAAGTT
TTTCAATATCCTCA
back to top